RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 TTLL7Q6ZT98 887 aa19.31■□□□□ 0.68
PDE6D-203ENST00000428104 ZNF296Q8WUU4 475 aaPredicted RBP19.31■□□□□ 0.68
PDE6D-203ENST00000428104 HTTP42858 3142 aa19.31■□□□□ 0.68
PDE6D-203ENST00000428104 ABCC4O15439 1325 aa19.3■□□□□ 0.68
PDE6D-203ENST00000428104 MAP3K15Q6ZN16 1313 aa19.3■□□□□ 0.68
PDE6D-203ENST00000428104 FXR1P51114 621 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDE6D-203ENST00000428104 RASAL3Q86YV0 1011 aa19.3■□□□□ 0.68
PDE6D-203ENST00000428104 DCPSQ96C86 337 aaKnown RBP19.3■□□□□ 0.68
PDE6D-203ENST00000428104 HSPA5P11021 654 aaKnown RBP19.29■□□□□ 0.68
PDE6D-203ENST00000428104 RBM26Q5T8P6 1007 aaKnown RBP19.29■□□□□ 0.68
PDE6D-203ENST00000428104 MCM10Q7L590 875 aa19.29■□□□□ 0.68
PDE6D-203ENST00000428104 MPNDQ8N594 471 aa19.29■□□□□ 0.68
PDE6D-203ENST00000428104 ZBTB3Q9H5J0 574 aa19.29■□□□□ 0.68
PDE6D-203ENST00000428104 COL3A1P02461 1466 aaPredicted RBP19.28■□□□□ 0.68
PDE6D-203ENST00000428104 TBC1D8O95759 1140 aa19.28■□□□□ 0.68
PDE6D-203ENST00000428104 DPF2Q92785 391 aa19.28■□□□□ 0.68
PDE6D-203ENST00000428104 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
PDE6D-203ENST00000428104 AKAP11Q9UKA4 1901 aa19.27■□□□□ 0.68
PDE6D-203ENST00000428104 PSMD14O00487 310 aa19.27■□□□□ 0.68
PDE6D-203ENST00000428104 FBXO46Q6PJ61 603 aaPredicted RBP19.27■□□□□ 0.68
PDE6D-203ENST00000428104 KIF6Q6ZMV9 814 aa19.27■□□□□ 0.68
PDE6D-203ENST00000428104 SP8Q8IXZ3 490 aa19.26■□□□□ 0.67
PDE6D-203ENST00000428104 REM2Q8IYK8 340 aaPredicted RBP19.26■□□□□ 0.67
PDE6D-203ENST00000428104 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
PDE6D-203ENST00000428104 RRP7AQ9Y3A4 280 aaKnown RBP19.26■□□□□ 0.67
PDE6D-203ENST00000428104 SZT2Q5T011 3432 aa19.26■□□□□ 0.67
PDE6D-203ENST00000428104 PRKAR2BP31323 418 aa19.25■□□□□ 0.67
PDE6D-203ENST00000428104 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
PDE6D-203ENST00000428104 DCTN1Q14203 1278 aa19.25■□□□□ 0.67
PDE6D-203ENST00000428104 CDCA5Q96FF9 252 aa19.25■□□□□ 0.67
PDE6D-203ENST00000428104 GGA3Q9NZ52 723 aa19.25■□□□□ 0.67
PDE6D-203ENST00000428104 ASTN2O75129 1339 aaPredicted RBP19.25■□□□□ 0.67
PDE6D-203ENST00000428104 CENPFP49454 3210 aa19.24■□□□□ 0.67
PDE6D-203ENST00000428104 BBOX1O75936 387 aa19.24■□□□□ 0.67
PDE6D-203ENST00000428104 CC2D1BQ5T0F9 858 aaKnown RBP19.24■□□□□ 0.67
PDE6D-203ENST00000428104 SULF1Q8IWU6 871 aa19.24■□□□□ 0.67
PDE6D-203ENST00000428104 RTF1Q92541 710 aaKnown RBP19.24■□□□□ 0.67
PDE6D-203ENST00000428104 MIS18AQ9NYP9 233 aa19.24■□□□□ 0.67
PDE6D-203ENST00000428104 MYL6BP14649 208 aa19.23■□□□□ 0.67
PDE6D-203ENST00000428104 PPP1R42Q7Z4L9 355 aa19.23■□□□□ 0.67
PDE6D-203ENST00000428104 DBNDD1Q9H9R9 158 aa19.23■□□□□ 0.67
PDE6D-203ENST00000428104 BRCA2P51587 3418 aa19.23■□□□□ 0.67
PDE6D-203ENST00000428104 POTEFA5A3E0 1075 aa19.22■□□□□ 0.67
PDE6D-203ENST00000428104 GPR25O00155 361 aa19.22■□□□□ 0.67
PDE6D-203ENST00000428104 RSPH6AQ9H0K4 717 aa19.22■□□□□ 0.67
PDE6D-203ENST00000428104 NUP98P52948 1817 aa19.22■□□□□ 0.67
PDE6D-203ENST00000428104 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
PDE6D-203ENST00000428104 KIF4BQ2VIQ3 1234 aa19.21■□□□□ 0.67
PDE6D-203ENST00000428104 SLC10A5Q5PT55 438 aa19.21■□□□□ 0.67
PDE6D-203ENST00000428104 KCNQ5Q9NR82 932 aa19.21■□□□□ 0.67
PDE6D-203ENST00000428104 RPS12P25398 132 aaKnown RBP19.2■□□□□ 0.66
PDE6D-203ENST00000428104 GIGYF2Q6Y7W6 1299 aaKnown RBP19.2■□□□□ 0.66
PDE6D-203ENST00000428104 RTL9Q8NET4 1388 aa19.19■□□□□ 0.66
PDE6D-203ENST00000428104 HCLS1P14317 486 aaPredicted RBP19.19■□□□□ 0.66
PDE6D-203ENST00000428104 PARP10Q53GL7 1025 aa19.19■□□□□ 0.66
PDE6D-203ENST00000428104 MOB2Q70IA6 237 aa19.19■□□□□ 0.66
PDE6D-203ENST00000428104 UTP14AQ9BVJ6 771 aaKnown RBP19.19■□□□□ 0.66
PDE6D-203ENST00000428104 A0A0C4DFX4 3053 aa19.19■□□□□ 0.66
PDE6D-203ENST00000428104 RIMBP2O15034 1052 aa19.18■□□□□ 0.66
PDE6D-203ENST00000428104 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
PDE6D-203ENST00000428104 TAF7Q15545 349 aaPredicted RBP19.18■□□□□ 0.66
PDE6D-203ENST00000428104 WASHC4Q2M389 1173 aa19.18■□□□□ 0.66
PDE6D-203ENST00000428104 DDX46Q7L014 1031 aaKnown RBP19.18■□□□□ 0.66
PDE6D-203ENST00000428104 R3HDMLQ9H3Y0 253 aa19.18■□□□□ 0.66
PDE6D-203ENST00000428104 LAMB4A4D0S4 1761 aa19.17■□□□□ 0.66
PDE6D-203ENST00000428104 FKTNO75072 461 aa19.17■□□□□ 0.66
PDE6D-203ENST00000428104 GRAPQ13588 217 aa19.17■□□□□ 0.66
PDE6D-203ENST00000428104 NOM1Q5C9Z4 860 aaKnown RBP19.17■□□□□ 0.66
PDE6D-203ENST00000428104 GRAPLQ8TC17 118 aaPredicted RBP19.17■□□□□ 0.66
PDE6D-203ENST00000428104 POLR2AP24928 1970 aaKnown RBP19.17■□□□□ 0.66
PDE6D-203ENST00000428104 UBE2Q2LH0YL09 131 aa19.16■□□□□ 0.66
PDE6D-203ENST00000428104 ECE2O60344 883 aa19.16■□□□□ 0.66
PDE6D-203ENST00000428104 FKBP1BP68106 108 aa19.16■□□□□ 0.66
PDE6D-203ENST00000428104 DOK7Q18PE1 504 aa19.16■□□□□ 0.66
PDE6D-203ENST00000428104 ANGEL2Q5VTE6 544 aaKnown RBP19.16■□□□□ 0.66
PDE6D-203ENST00000428104 COLQQ9Y215 455 aaPredicted RBP19.16■□□□□ 0.66
PDE6D-203ENST00000428104 PER1O15534 1290 aaPredicted RBP19.15■□□□□ 0.66
PDE6D-203ENST00000428104 TM4SF4P48230 202 aa19.15■□□□□ 0.66
PDE6D-203ENST00000428104 MKRN3Q13064 507 aaKnown RBP19.15■□□□□ 0.66
PDE6D-203ENST00000428104 TIMELESSQ9UNS1 1208 aa19.15■□□□□ 0.66
PDE6D-203ENST00000428104 SCARF1Q14162 830 aa19.14■□□□□ 0.65
PDE6D-203ENST00000428104 NSFL1CQ9UNZ2 370 aaKnown RBP19.14■□□□□ 0.65
PDE6D-203ENST00000428104 SCAF8Q9UPN6 1271 aaKnown RBP19.14■□□□□ 0.65
PDE6D-203ENST00000428104 PAPPA2Q9BXP8 1791 aa19.14■□□□□ 0.65
PDE6D-203ENST00000428104 C6orf229H3BNL8 230 aa19.13■□□□□ 0.65
PDE6D-203ENST00000428104 POLLQ9UGP5 575 aa19.13■□□□□ 0.65
PDE6D-203ENST00000428104 DLL1O00548 723 aa19.12■□□□□ 0.65
PDE6D-203ENST00000428104 INTS3Q68E01 1043 aaKnown RBP19.12■□□□□ 0.65
PDE6D-203ENST00000428104 THUMPD2Q9BTF0 503 aaKnown RBP19.12■□□□□ 0.65
PDE6D-203ENST00000428104 TRIM17Q9Y577 477 aa19.12■□□□□ 0.65
PDE6D-203ENST00000428104 HTATSF1O43719 755 aaKnown RBP19.11■□□□□ 0.65
PDE6D-203ENST00000428104 VIL1P09327 827 aaKnown RBP19.11■□□□□ 0.65
PDE6D-203ENST00000428104 EN2P19622 333 aaPredicted RBP19.11■□□□□ 0.65
PDE6D-203ENST00000428104 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
PDE6D-203ENST00000428104 PRAMEF18Q5VWM3 479 aa19.11■□□□□ 0.65
PDE6D-203ENST00000428104 TMC4Q7Z404 712 aa19.11■□□□□ 0.65
PDE6D-203ENST00000428104 ZNF280AP59817 542 aaPredicted RBP19.1■□□□□ 0.65
PDE6D-203ENST00000428104 GPSM2P81274 684 aa19.1■□□□□ 0.65
PDE6D-203ENST00000428104 OTOP1Q7RTM1 612 aa19.1■□□□□ 0.65
PDE6D-203ENST00000428104 NLRP10Q86W26 655 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms