RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 BICDL1Q6ZP65 573 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 ILDR2Q71H61 639 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 KAZALD1Q96I82 304 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 SUCLG2Q96I99 432 aa19.13■□□□□ 0.65
TVP23C-203ENST00000428082 GYS1P13807 737 aa19.12■□□□□ 0.65
TVP23C-203ENST00000428082 SDSP20132 328 aa19.12■□□□□ 0.65
TVP23C-203ENST00000428082 SUSD4Q5VX71 490 aa19.12■□□□□ 0.65
TVP23C-203ENST00000428082 C16orf71Q8IYS4 520 aaPredicted RBP19.12■□□□□ 0.65
TVP23C-203ENST00000428082 USP26Q9BXU7 913 aa19.12■□□□□ 0.65
TVP23C-203ENST00000428082 FAM177BA6PVY3 158 aa19.12■□□□□ 0.65
TVP23C-203ENST00000428082 FAM89AQ96GI7 184 aa19.12■□□□□ 0.65
TVP23C-203ENST00000428082 QSER1Q2KHR3 1735 aa19.11■□□□□ 0.65
TVP23C-203ENST00000428082 PCCAP05165 728 aaPredicted RBP19.11■□□□□ 0.65
TVP23C-203ENST00000428082 PARP10Q53GL7 1025 aa19.11■□□□□ 0.65
TVP23C-203ENST00000428082 SYNE4Q8N205 404 aa19.11■□□□□ 0.65
TVP23C-203ENST00000428082 ZBTB38Q8NAP3 1195 aaPredicted RBP19.11■□□□□ 0.65
TVP23C-203ENST00000428082 FLAD1Q8NFF5 587 aa19.11■□□□□ 0.65
TVP23C-203ENST00000428082 TRMT112Q9UI30 125 aaKnown RBP19.11■□□□□ 0.65
TVP23C-203ENST00000428082 TNPO1Q92973 898 aaKnown RBP19.1■□□□□ 0.65
TVP23C-203ENST00000428082 EPHA10Q5JZY3 1008 aa19.1■□□□□ 0.65
TVP23C-203ENST00000428082 BICC1Q9H694 974 aaKnown RBP19.1■□□□□ 0.65
TVP23C-203ENST00000428082 COL24A1Q17RW2 1714 aa19.09■□□□□ 0.65
TVP23C-203ENST00000428082 GOLGA6L22H0YM25 854 aa19.09■□□□□ 0.65
TVP23C-203ENST00000428082 ST18O60284 1047 aa19.09■□□□□ 0.65
TVP23C-203ENST00000428082 ATP8B2P98198 1209 aa19.09■□□□□ 0.65
TVP23C-203ENST00000428082 SETDB2Q96T68 719 aa19.09■□□□□ 0.65
TVP23C-203ENST00000428082 FSD2A1L4K1 749 aa19.08■□□□□ 0.65
TVP23C-203ENST00000428082 ERC2O15083 957 aa19.08■□□□□ 0.65
TVP23C-203ENST00000428082 NTSR2O95665 410 aa19.08■□□□□ 0.65
TVP23C-203ENST00000428082 UTP14AQ9BVJ6 771 aaKnown RBP19.08■□□□□ 0.65
TVP23C-203ENST00000428082 LRRCC1Q9C099 1032 aa19.08■□□□□ 0.65
TVP23C-203ENST00000428082 HDAC5Q9UQL6 1122 aa19.08■□□□□ 0.65
TVP23C-203ENST00000428082 PNMA6EA0A0J9YXQ4 647 aa19.08■□□□□ 0.64
TVP23C-203ENST00000428082 SMARCA5O60264 1052 aaPredicted RBP19.08■□□□□ 0.64
TVP23C-203ENST00000428082 PDE1AP54750 535 aa19.08■□□□□ 0.64
TVP23C-203ENST00000428082 NFIXQ14938 502 aa19.08■□□□□ 0.64
TVP23C-203ENST00000428082 CLEC17AQ6ZS10 378 aa19.08■□□□□ 0.64
TVP23C-203ENST00000428082 PPP1R42Q7Z4L9 355 aa19.08■□□□□ 0.64
TVP23C-203ENST00000428082 OTUD7AQ8TE49 926 aaPredicted RBP19.07■□□□□ 0.64
TVP23C-203ENST00000428082 CWC22Q9HCG8 908 aaKnown RBP19.07■□□□□ 0.64
TVP23C-203ENST00000428082 CDHR2Q9BYE9 1310 aa19.06■□□□□ 0.64
TVP23C-203ENST00000428082 APBB1O00213 710 aa19.06■□□□□ 0.64
TVP23C-203ENST00000428082 NUCB2P80303 420 aa19.06■□□□□ 0.64
TVP23C-203ENST00000428082 FOXO4P98177 505 aa19.06■□□□□ 0.64
TVP23C-203ENST00000428082 NUTM1Q86Y26 1132 aa19.06■□□□□ 0.64
TVP23C-203ENST00000428082 SH3TC1Q8TE82 1336 aa19.06■□□□□ 0.64
TVP23C-203ENST00000428082 FAM43AQ8N2R8 423 aa19.06■□□□□ 0.64
TVP23C-203ENST00000428082 AOX1Q06278 1338 aa19.05■□□□□ 0.64
TVP23C-203ENST00000428082 IRS4O14654 1257 aaPredicted RBP19.05■□□□□ 0.64
TVP23C-203ENST00000428082 CD2BP2O95400 341 aaKnown RBP19.05■□□□□ 0.64
TVP23C-203ENST00000428082 MTX1Q13505 466 aa19.05■□□□□ 0.64
TVP23C-203ENST00000428082 PDGFDQ9GZP0 370 aaPredicted RBP19.05■□□□□ 0.64
TVP23C-203ENST00000428082 DDX60Q8IY21 1712 aaKnown RBP19.04■□□□□ 0.64
TVP23C-203ENST00000428082 MYH3P11055 1940 aa19.04■□□□□ 0.64
TVP23C-203ENST00000428082 SRGAP3O43295 1099 aa19.04■□□□□ 0.64
TVP23C-203ENST00000428082 TM4SF1P30408 202 aa19.04■□□□□ 0.64
TVP23C-203ENST00000428082 MRE11P49959 708 aa19.04■□□□□ 0.64
TVP23C-203ENST00000428082 CARMIL3Q8ND23 1372 aa19.04■□□□□ 0.64
TVP23C-203ENST00000428082 MCCP23508 829 aa19.04■□□□□ 0.64
TVP23C-203ENST00000428082 RABL6Q3YEC7 729 aaPredicted RBP19.04■□□□□ 0.64
TVP23C-203ENST00000428082 NBPF5PQ86XG9 351 aaPredicted RBP19.04■□□□□ 0.64
TVP23C-203ENST00000428082 SSH3Q8TE77 659 aa19.04■□□□□ 0.64
TVP23C-203ENST00000428082 PLA2G12BQ9BX93 195 aa19.04■□□□□ 0.64
TVP23C-203ENST00000428082 LAMB2P55268 1798 aa19.03■□□□□ 0.64
TVP23C-203ENST00000428082 RAB11FIP3O75154 756 aa19.03■□□□□ 0.64
TVP23C-203ENST00000428082 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
TVP23C-203ENST00000428082 ERFEQ4G0M1 354 aa19.03■□□□□ 0.64
TVP23C-203ENST00000428082 LMBR1LQ6UX01 489 aa19.03■□□□□ 0.64
TVP23C-203ENST00000428082 NLGN1Q8N2Q7 840 aa19.03■□□□□ 0.64
TVP23C-203ENST00000428082 EPB41L2O43491 1005 aaKnown RBP19.02■□□□□ 0.64
TVP23C-203ENST00000428082 MX1P20591 662 aa19.02■□□□□ 0.64
TVP23C-203ENST00000428082 POLA2Q14181 598 aa19.02■□□□□ 0.64
TVP23C-203ENST00000428082 MSL1Q68DK7 614 aa19.02■□□□□ 0.64
TVP23C-203ENST00000428082 NYXQ9GZU5 481 aa19.02■□□□□ 0.64
TVP23C-203ENST00000428082 STAP2Q9UGK3 403 aa19.02■□□□□ 0.64
TVP23C-203ENST00000428082 SALL3Q9BXA9 1300 aa19.02■□□□□ 0.64
TVP23C-203ENST00000428082 MCM2P49736 904 aa19.02■□□□□ 0.63
TVP23C-203ENST00000428082 DDR1Q08345 913 aa19.02■□□□□ 0.63
TVP23C-203ENST00000428082 PDE8AO60658 829 aa19.01■□□□□ 0.63
TVP23C-203ENST00000428082 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
TVP23C-203ENST00000428082 TPTE2Q6XPS3 522 aa19.01■□□□□ 0.63
TVP23C-203ENST00000428082 CCDC24Q8N4L8 307 aa19.01■□□□□ 0.63
TVP23C-203ENST00000428082 GZF1Q9H116 711 aaPredicted RBP19.01■□□□□ 0.63
TVP23C-203ENST00000428082 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
TVP23C-203ENST00000428082 CASZ1Q86V15 1759 aa19.01■□□□□ 0.63
TVP23C-203ENST00000428082 POLRMTO00411 1230 aaKnown RBP19■□□□□ 0.63
TVP23C-203ENST00000428082 CHMP3Q9Y3E7 222 aa19■□□□□ 0.63
TVP23C-203ENST00000428082 ABCC12Q96J65 1359 aa19■□□□□ 0.63
TVP23C-203ENST00000428082 SERPINB2P05120 415 aa19■□□□□ 0.63
TVP23C-203ENST00000428082 CTSWP56202 376 aa19■□□□□ 0.63
TVP23C-203ENST00000428082 CCDC85AQ96PX6 553 aaPredicted RBP19■□□□□ 0.63
TVP23C-203ENST00000428082 RTN4Q9NQC3 1192 aaKnown RBP19■□□□□ 0.63
TVP23C-203ENST00000428082 CSF1RP07333 972 aa18.99■□□□□ 0.63
TVP23C-203ENST00000428082 TTLL11Q8NHH1 800 aa18.99■□□□□ 0.63
TVP23C-203ENST00000428082 XRCC6P12956 609 aaKnown RBP eCLIP18.98■□□□□ 0.63
TVP23C-203ENST00000428082 ANAPC15P60006 121 aa18.98■□□□□ 0.63
TVP23C-203ENST00000428082 CNBD1Q8NA66 436 aa18.98■□□□□ 0.63
TVP23C-203ENST00000428082 FOXD4L1Q9NU39 408 aa18.98■□□□□ 0.63
TVP23C-203ENST00000428082 PA2G4Q9UQ80 394 aaKnown RBP18.98■□□□□ 0.63
TVP23C-203ENST00000428082 NPHP1O15259 732 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms