RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 GOLGA6L6A8MZA4 724 aa12.54□□□□□ -0.4
TCOF1-204ENST00000427724 NAA16Q6N069 864 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-204ENST00000427724 ITGA6P23229 1130 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 ZNF76P36508 570 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 TNNI2P48788 182 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 PDE4CQ08493 712 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 USP6P35125 1406 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 TAF5LO75529 589 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 DALRD3Q5D0E6 543 aaKnown RBP12.53□□□□□ -0.4
TCOF1-204ENST00000427724 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 ZFYVE9O95405 1425 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 NRDCO43847 1150 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 ZGPATQ8N5A5 531 aaKnown RBP12.53□□□□□ -0.4
TCOF1-204ENST00000427724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.47e-10■■■■■ 44.2
TCOF1-204ENST00000427724 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 PALLDQ8WX93 1383 aa12.53□□□□□ -0.4
TCOF1-204ENST00000427724 PDE8AO60658 829 aa12.52□□□□□ -0.4
TCOF1-204ENST00000427724 GSTO1P78417 241 aa12.52□□□□□ -0.4
TCOF1-204ENST00000427724 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
TCOF1-204ENST00000427724 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.41
TCOF1-204ENST00000427724 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.41
TCOF1-204ENST00000427724 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
TCOF1-204ENST00000427724 RAB11FIP3O75154 756 aa12.52□□□□□ -0.41
TCOF1-204ENST00000427724 IL15P40933 162 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-204ENST00000427724 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-204ENST00000427724 TRMT1LQ7Z2T5 733 aaKnown RBP12.52□□□□□ -0.41
TCOF1-204ENST00000427724 C1orf167Q5SNV9 1468 aa12.52□□□□□ -0.41
TCOF1-204ENST00000427724 RIMS1Q86UR5 1692 aaKnown RBP12.52□□□□□ -0.41
TCOF1-204ENST00000427724 LDHBP07195 334 aaKnown RBP12.51□□□□□ -0.41
TCOF1-204ENST00000427724 STK3Q13188 491 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 FAM135BQ49AJ0 1406 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
TCOF1-204ENST00000427724 G2E3Q7L622 706 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 MBD3O95983 291 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 PLS1Q14651 629 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
TCOF1-204ENST00000427724 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 VAT1LQ9HCJ6 419 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 CCDC39Q9UFE4 941 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 CDC42BPAQ5VT25 1732 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 VAMP4O75379 141 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 TRIM22Q8IYM9 498 aa12.51□□□□□ -0.41
TCOF1-204ENST00000427724 ZNF594Q96JF6 807 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-204ENST00000427724 TSPY2A6NKD2 308 aa12.5□□□□□ -0.41
TCOF1-204ENST00000427724 HIBADHP31937 336 aaKnown RBP12.5□□□□□ -0.41
TCOF1-204ENST00000427724 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
TCOF1-204ENST00000427724 TNS3Q68CZ2 1445 aa12.5□□□□□ -0.41
TCOF1-204ENST00000427724 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
TCOF1-204ENST00000427724 MX1P20591 662 aa12.5□□□□□ -0.41
TCOF1-204ENST00000427724 DLGAP5Q15398 846 aa12.5□□□□□ -0.41
TCOF1-204ENST00000427724 IQCA1Q86XH1 822 aa12.5□□□□□ -0.41
TCOF1-204ENST00000427724 MRPL50Q8N5N7 158 aaKnown RBP12.5□□□□□ -0.41
TCOF1-204ENST00000427724 SYCE3A1L190 88 aa12.5□□□□□ -0.41
TCOF1-204ENST00000427724 FIBPO43427 364 aa12.5□□□□□ -0.41
TCOF1-204ENST00000427724 CYP27B1O15528 508 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 EIF4A1P60842 406 aaKnown RBP12.49□□□□□ -0.41
TCOF1-204ENST00000427724 GTF2IP78347 998 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 TTF1Q15361 905 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-204ENST00000427724 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 SULF1Q8IWU6 871 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-204ENST00000427724 PIM2Q9P1W9 311 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 CBX1P83916 185 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 TPD52L1Q16890 204 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-204ENST00000427724 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 TTLL6Q8N841 843 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 C21orf2O43822 256 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 MCM2P49736 904 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 ZNF592Q92610 1267 aa12.49□□□□□ -0.41
TCOF1-204ENST00000427724 ABT1Q9ULW3 272 aaKnown RBP12.49□□□□□ -0.41
TCOF1-204ENST00000427724 GIGYF1O75420 1035 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-204ENST00000427724 WWC2Q6AWC2 1192 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 BICD2Q8TD16 824 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 ECHDC1Q9NTX5 307 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 HAND2P61296 217 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 KIAA0825Q8IV33 1275 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 TTC22Q5TAA0 569 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 TIMM10P62072 90 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 SLC9C2Q5TAH2 1124 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 KLHDC4Q8TBB5 520 aa12.48□□□□□ -0.41
TCOF1-204ENST00000427724 TCP10Q12799 353 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 ARHGAP45Q92619 1136 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-204ENST00000427724 SNX21Q969T3 373 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 CCDC47Q96A33 483 aaKnown RBP12.47□□□□□ -0.41
TCOF1-204ENST00000427724 DCPSQ96C86 337 aaKnown RBP12.47□□□□□ -0.41
TCOF1-204ENST00000427724 SCLT1Q96NL6 688 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 ZNF213O14771 459 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 SDSP20132 328 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 PDE4BQ07343 736 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 KRI1Q8N9T8 703 aaKnown RBP12.47□□□□□ -0.41
TCOF1-204ENST00000427724 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
TCOF1-204ENST00000427724 ZBTB7BO15156 539 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-204ENST00000427724 RAD17O75943 681 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms