RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 NLRP10Q86W26 655 aa21.92■■□□□ 1.1
LIMS2-211ENST00000426981 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
LIMS2-211ENST00000426981 PARP10Q53GL7 1025 aa21.91■■□□□ 1.1
LIMS2-211ENST00000426981 PPP1R42Q7Z4L9 355 aa21.91■■□□□ 1.1
LIMS2-211ENST00000426981 UTP14AQ9BVJ6 771 aaKnown RBP21.91■■□□□ 1.1
LIMS2-211ENST00000426981 IBTKQ9P2D0 1353 aaPredicted RBP21.91■■□□□ 1.1
LIMS2-211ENST00000426981 TIAM2Q8IVF5 1701 aa21.9■■□□□ 1.1
LIMS2-211ENST00000426981 SMC5Q8IY18 1101 aa21.9■■□□□ 1.1
LIMS2-211ENST00000426981 TBC1D2Q9BYX2 928 aa21.9■■□□□ 1.1
LIMS2-211ENST00000426981 DDX11L8A8MPP1 907 aa21.89■■□□□ 1.1
LIMS2-211ENST00000426981 ATP5J2-PTCD1G3V325 749 aa21.89■■□□□ 1.1
LIMS2-211ENST00000426981 HCLS1P14317 486 aaPredicted RBP21.89■■□□□ 1.1
LIMS2-211ENST00000426981 ANKRD13DQ6ZTN6 518 aa21.89■■□□□ 1.1
LIMS2-211ENST00000426981 PLBD2Q8NHP8 589 aa21.89■■□□□ 1.1
LIMS2-211ENST00000426981 SEC24BO95487 1268 aa21.89■■□□□ 1.09
LIMS2-211ENST00000426981 RLBP1P12271 317 aa21.89■■□□□ 1.09
LIMS2-211ENST00000426981 ATF7IPQ6VMQ6 1270 aa21.89■■□□□ 1.09
LIMS2-211ENST00000426981 TAOK3Q9H2K8 898 aa21.89■■□□□ 1.09
LIMS2-211ENST00000426981 RRAGCQ9HB90 399 aa21.89■■□□□ 1.09
LIMS2-211ENST00000426981 HYPKQ9NX55 129 aa21.89■■□□□ 1.09
LIMS2-211ENST00000426981 CIZ1Q9ULV3 898 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-211ENST00000426981 HSP90AB3PQ58FF7 597 aa21.88■■□□□ 1.09
LIMS2-211ENST00000426981 C22orf23Q9BZE7 217 aa21.88■■□□□ 1.09
LIMS2-211ENST00000426981 DICER1Q9UPY3 1922 aaKnown RBP21.87■■□□□ 1.09
LIMS2-211ENST00000426981 RIC1Q4ADV7 1423 aa21.87■■□□□ 1.09
LIMS2-211ENST00000426981 LAMB2P55268 1798 aa21.87■■□□□ 1.09
LIMS2-211ENST00000426981 ALDH1B1P30837 517 aa21.87■■□□□ 1.09
LIMS2-211ENST00000426981 CCDC93Q567U6 631 aa21.87■■□□□ 1.09
LIMS2-211ENST00000426981 SLC10A5Q5PT55 438 aa21.87■■□□□ 1.09
LIMS2-211ENST00000426981 RPGRQ92834 1020 aaKnown RBP21.87■■□□□ 1.09
LIMS2-211ENST00000426981 SNX21Q969T3 373 aa21.87■■□□□ 1.09
LIMS2-211ENST00000426981 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
LIMS2-211ENST00000426981 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
LIMS2-211ENST00000426981 LTBP3Q9NS15 1303 aa21.86■■□□□ 1.09
LIMS2-211ENST00000426981 HSCBQ8IWL3 235 aa21.86■■□□□ 1.09
LIMS2-211ENST00000426981 ISCA1Q9BUE6 129 aa21.86■■□□□ 1.09
LIMS2-211ENST00000426981 ZNF277Q9NRM2 450 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-211ENST00000426981 HOXA10P31260 410 aaPredicted RBP21.85■■□□□ 1.09
LIMS2-211ENST00000426981 NLRP3Q96P20 1036 aa21.85■■□□□ 1.09
LIMS2-211ENST00000426981 TAF1P21675 1872 aa21.84■■□□□ 1.09
LIMS2-211ENST00000426981 MCM4P33991 863 aa21.84■■□□□ 1.09
LIMS2-211ENST00000426981 GOLGA6L3A6NEY3 463 aa21.83■■□□□ 1.09
LIMS2-211ENST00000426981 GLTPD2A6NH11 291 aa21.83■■□□□ 1.09
LIMS2-211ENST00000426981 SOGA3Q5TF21 947 aa21.83■■□□□ 1.09
LIMS2-211ENST00000426981 RIC3Q7Z5B4 369 aa21.83■■□□□ 1.09
LIMS2-211ENST00000426981 FAM89AQ96GI7 184 aa21.83■■□□□ 1.09
LIMS2-211ENST00000426981 RBM17Q96I25 401 aaKnown RBP21.83■■□□□ 1.09
LIMS2-211ENST00000426981 RTN4Q9NQC3 1192 aaKnown RBP21.83■■□□□ 1.09
LIMS2-211ENST00000426981 SNED1Q8TER0 1413 aa21.83■■□□□ 1.09
LIMS2-211ENST00000426981 RBM25P49756 843 aaKnown RBP21.82■■□□□ 1.08
LIMS2-211ENST00000426981 FKBP4Q02790 459 aaKnown RBP eCLIP21.82■■□□□ 1.08
LIMS2-211ENST00000426981 CCDC30Q5VVM6 783 aa21.82■■□□□ 1.08
LIMS2-211ENST00000426981 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
LIMS2-211ENST00000426981 CRAMP1Q96RY5 1269 aa21.82■■□□□ 1.08
LIMS2-211ENST00000426981 DDX60Q8IY21 1712 aaKnown RBP21.82■■□□□ 1.08
LIMS2-211ENST00000426981 SH3TC1Q8TE82 1336 aa21.82■■□□□ 1.08
LIMS2-211ENST00000426981 TWISTNBQ3B726 338 aaPredicted RBP21.81■■□□□ 1.08
LIMS2-211ENST00000426981 G2E3Q7L622 706 aa21.81■■□□□ 1.08
LIMS2-211ENST00000426981 MYD88Q99836 296 aa21.81■■□□□ 1.08
LIMS2-211ENST00000426981 SLKQ9H2G2 1235 aaPredicted RBP21.81■■□□□ 1.08
LIMS2-211ENST00000426981 ZC3H4Q9UPT8 1303 aaKnown RBP21.81■■□□□ 1.08
LIMS2-211ENST00000426981 FSD2A1L4K1 749 aa21.8■■□□□ 1.08
LIMS2-211ENST00000426981 POTECB2RU33 542 aa21.8■■□□□ 1.08
LIMS2-211ENST00000426981 TOMM70O94826 608 aa21.8■■□□□ 1.08
LIMS2-211ENST00000426981 JARID2Q92833 1246 aaPredicted RBP21.8■■□□□ 1.08
LIMS2-211ENST00000426981 ABCC4O15439 1325 aa21.8■■□□□ 1.08
LIMS2-211ENST00000426981 PPEF1O14829 653 aaPredicted RBP21.8■■□□□ 1.08
LIMS2-211ENST00000426981 TRIM27P14373 513 aa21.8■■□□□ 1.08
LIMS2-211ENST00000426981 SKOR2Q2VWA4 1001 aaPredicted RBP21.8■■□□□ 1.08
LIMS2-211ENST00000426981 GCC1Q96CN9 775 aa21.8■■□□□ 1.08
LIMS2-211ENST00000426981 COL4A1P02462 1669 aa21.79■■□□□ 1.08
LIMS2-211ENST00000426981 DDNO94850 711 aaPredicted RBP21.79■■□□□ 1.08
LIMS2-211ENST00000426981 MRE11P49959 708 aa21.79■■□□□ 1.08
LIMS2-211ENST00000426981 EXOSC9Q06265 439 aaKnown RBP21.79■■□□□ 1.08
LIMS2-211ENST00000426981 RTKN2Q8IZC4 609 aa21.79■■□□□ 1.08
LIMS2-211ENST00000426981 ZBTB40Q9NUA8 1239 aa21.79■■□□□ 1.08
LIMS2-211ENST00000426981 COL4A5P29400 1685 aa21.78■■□□□ 1.08
LIMS2-211ENST00000426981 CEP350Q5VT06 3117 aa21.78■■□□□ 1.08
LIMS2-211ENST00000426981 NUCB1Q02818 461 aa21.78■■□□□ 1.08
LIMS2-211ENST00000426981 ITPRIPQ8IWB1 547 aa21.78■■□□□ 1.08
LIMS2-211ENST00000426981 TRIM28Q13263 835 aaKnown RBP21.77■■□□□ 1.08
LIMS2-211ENST00000426981 IARSP41252 1262 aaKnown RBP21.76■■□□□ 1.07
LIMS2-211ENST00000426981 BMP2KLQ5H9B9 411 aa21.76■■□□□ 1.07
LIMS2-211ENST00000426981 SSH1Q8WYL5 1049 aa21.76■■□□□ 1.07
LIMS2-211ENST00000426981 MAP3K2Q9Y2U5 619 aa21.76■■□□□ 1.07
LIMS2-211ENST00000426981 ZNF541Q9H0D2 1346 aa21.76■■□□□ 1.07
LIMS2-211ENST00000426981 PI4KAP2A4QPH2 592 aa21.75■■□□□ 1.07
LIMS2-211ENST00000426981 VAMP4O75379 141 aa21.75■■□□□ 1.07
LIMS2-211ENST00000426981 SLC4A2P04920 1241 aa21.75■■□□□ 1.07
LIMS2-211ENST00000426981 HSPA6P17066 643 aa21.75■■□□□ 1.07
LIMS2-211ENST00000426981 DPY19L2Q6NUT2 758 aa21.75■■□□□ 1.07
LIMS2-211ENST00000426981 C16orf71Q8IYS4 520 aaPredicted RBP21.75■■□□□ 1.07
LIMS2-211ENST00000426981 PI4KAP1Q8N8J0 262 aa21.75■■□□□ 1.07
LIMS2-211ENST00000426981 GBP4Q96PP9 640 aa21.75■■□□□ 1.07
LIMS2-211ENST00000426981 METTL22Q9BUU2 404 aaPredicted RBP21.75■■□□□ 1.07
LIMS2-211ENST00000426981 WDR90Q96KV7 1748 aa21.74■■□□□ 1.07
LIMS2-211ENST00000426981 IRS4O14654 1257 aaPredicted RBP21.74■■□□□ 1.07
LIMS2-211ENST00000426981 VEGFAP15692 232 aaPredicted RBP21.74■■□□□ 1.07
LIMS2-211ENST00000426981 PSMD1Q99460 953 aa21.74■■□□□ 1.07
LIMS2-211ENST00000426981 BCL2L13Q9BXK5 485 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms