RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
SGCE-203ENST00000425444 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
SGCE-203ENST00000425444 ZC3H15Q8WU90 426 aaKnown RBP16.54■□□□□ 0.24
SGCE-203ENST00000425444 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
SGCE-203ENST00000425444 RNF186Q9NXI6 227 aa16.54■□□□□ 0.24
SGCE-203ENST00000425444 A0A0C4DFX4 3053 aa16.54■□□□□ 0.24
SGCE-203ENST00000425444 CHL1O00533 1208 aa16.53■□□□□ 0.24
SGCE-203ENST00000425444 CXCL9Q07325 125 aa16.53■□□□□ 0.24
SGCE-203ENST00000425444 AOC3Q16853 763 aa16.53■□□□□ 0.24
SGCE-203ENST00000425444 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
SGCE-203ENST00000425444 NECTIN2Q92692 538 aa16.53■□□□□ 0.24
SGCE-203ENST00000425444 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
SGCE-203ENST00000425444 HPS5Q9UPZ3 1129 aa16.53■□□□□ 0.24
SGCE-203ENST00000425444 AKAP11Q9UKA4 1901 aa16.53■□□□□ 0.24
SGCE-203ENST00000425444 ERVV-1B6SEH8 477 aa16.52■□□□□ 0.24
SGCE-203ENST00000425444 HIRAP54198 1017 aaPredicted RBP16.52■□□□□ 0.24
SGCE-203ENST00000425444 KIF23Q02241 960 aaPredicted RBP16.52■□□□□ 0.24
SGCE-203ENST00000425444 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
SGCE-203ENST00000425444 KRT24Q2M2I5 525 aa16.52■□□□□ 0.24
SGCE-203ENST00000425444 RGMBQ6NW40 437 aa16.52■□□□□ 0.24
SGCE-203ENST00000425444 USP48Q86UV5 1035 aa16.52■□□□□ 0.24
SGCE-203ENST00000425444 SLC51AQ86UW1 340 aa16.52■□□□□ 0.24
SGCE-203ENST00000425444 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
SGCE-203ENST00000425444 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
SGCE-203ENST00000425444 FAM155AB1AL88 458 aaPredicted RBP16.51■□□□□ 0.23
SGCE-203ENST00000425444 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
SGCE-203ENST00000425444 ANXA1P04083 346 aa16.51■□□□□ 0.23
SGCE-203ENST00000425444 CCDC102AQ96A19 550 aa16.51■□□□□ 0.23
SGCE-203ENST00000425444 ZNRF3Q9ULT6 936 aa16.51■□□□□ 0.23
SGCE-203ENST00000425444 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
SGCE-203ENST00000425444 CEP290O15078 2479 aa16.5■□□□□ 0.23
SGCE-203ENST00000425444 GPTP24298 496 aa16.5■□□□□ 0.23
SGCE-203ENST00000425444 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
SGCE-203ENST00000425444 ZNF157P51786 506 aaPredicted RBP16.5■□□□□ 0.23
SGCE-203ENST00000425444 HABP4Q5JVS0 413 aaKnown RBP16.5■□□□□ 0.23
SGCE-203ENST00000425444 DLK2Q6UY11 383 aa16.5■□□□□ 0.23
SGCE-203ENST00000425444 TRPM4Q8TD43 1214 aa16.5■□□□□ 0.23
SGCE-203ENST00000425444 NYXQ9GZU5 481 aa16.5■□□□□ 0.23
SGCE-203ENST00000425444 TMX4Q9H1E5 349 aaPredicted RBP16.5■□□□□ 0.23
SGCE-203ENST00000425444 CENPFP49454 3210 aa16.49■□□□□ 0.23
SGCE-203ENST00000425444 PDIA6Q15084 440 aa16.49■□□□□ 0.23
SGCE-203ENST00000425444 PROSER3Q2NL68 480 aa16.49■□□□□ 0.23
SGCE-203ENST00000425444 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
SGCE-203ENST00000425444 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
SGCE-203ENST00000425444 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
SGCE-203ENST00000425444 SZT2Q5T011 3432 aa16.49■□□□□ 0.23
SGCE-203ENST00000425444 CUL9Q8IWT3 2517 aa16.49■□□□□ 0.23
SGCE-203ENST00000425444 CDHR2Q9BYE9 1310 aa16.48■□□□□ 0.23
SGCE-203ENST00000425444 RAD17O75943 681 aa16.48■□□□□ 0.23
SGCE-203ENST00000425444 HOXB7P09629 217 aa16.48■□□□□ 0.23
SGCE-203ENST00000425444 GNAI1P63096 354 aa16.48■□□□□ 0.23
SGCE-203ENST00000425444 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
SGCE-203ENST00000425444 GIGYF2Q6Y7W6 1299 aaKnown RBP16.48■□□□□ 0.23
SGCE-203ENST00000425444 C2orf69Q8N8R5 385 aa16.48■□□□□ 0.23
SGCE-203ENST00000425444 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
SGCE-203ENST00000425444 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
SGCE-203ENST00000425444 H7C1D1 291 aa16.47■□□□□ 0.23
SGCE-203ENST00000425444 CRAMP1Q96RY5 1269 aa16.47■□□□□ 0.23
SGCE-203ENST00000425444 VPS33BQ9H267 617 aa16.47■□□□□ 0.23
SGCE-203ENST00000425444 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
SGCE-203ENST00000425444 CNOT7Q9UIV1 285 aaKnown RBP16.47■□□□□ 0.23
SGCE-203ENST00000425444 NUP98P52948 1817 aa16.47■□□□□ 0.23
SGCE-203ENST00000425444 UBN2Q6ZU65 1347 aa16.46■□□□□ 0.23
SGCE-203ENST00000425444 TNIP1Q15025 636 aa16.46■□□□□ 0.23
SGCE-203ENST00000425444 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
SGCE-203ENST00000425444 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
SGCE-203ENST00000425444 COPS6Q7L5N1 327 aa16.46■□□□□ 0.23
SGCE-203ENST00000425444 KRT26Q7Z3Y9 468 aa16.46■□□□□ 0.23
SGCE-203ENST00000425444 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
SGCE-203ENST00000425444 XAGE3Q8WTP9 111 aa16.46■□□□□ 0.23
SGCE-203ENST00000425444 CSRNP1Q96S65 589 aa16.46■□□□□ 0.23
SGCE-203ENST00000425444 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
SGCE-203ENST00000425444 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
SGCE-203ENST00000425444 PARP10Q53GL7 1025 aa16.45■□□□□ 0.22
SGCE-203ENST00000425444 SUPT20HQ8NEM7 779 aa16.45■□□□□ 0.22
SGCE-203ENST00000425444 HDAC9Q9UKV0 1011 aa16.45■□□□□ 0.22
SGCE-203ENST00000425444 IBTKQ9P2D0 1353 aaPredicted RBP16.45■□□□□ 0.22
SGCE-203ENST00000425444 POLR2AP24928 1970 aaKnown RBP16.45■□□□□ 0.22
SGCE-203ENST00000425444 HTTP42858 3142 aa16.45■□□□□ 0.22
SGCE-203ENST00000425444 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
SGCE-203ENST00000425444 HSP90AB3PQ58FF7 597 aa16.44■□□□□ 0.22
SGCE-203ENST00000425444 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
SGCE-203ENST00000425444 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
SGCE-203ENST00000425444 MICALL2Q8IY33 904 aa16.44■□□□□ 0.22
SGCE-203ENST00000425444 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
SGCE-203ENST00000425444 DBF4Q9UBU7 674 aaPredicted RBP16.44■□□□□ 0.22
SGCE-203ENST00000425444 TRIOBPQ9H2D6 2365 aa16.43■□□□□ 0.22
SGCE-203ENST00000425444 SLC10A3P09131 477 aa16.43■□□□□ 0.22
SGCE-203ENST00000425444 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
SGCE-203ENST00000425444 BRCA2P51587 3418 aa16.42■□□□□ 0.22
SGCE-203ENST00000425444 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
SGCE-203ENST00000425444 NTSR2O95665 410 aa16.42■□□□□ 0.22
SGCE-203ENST00000425444 DPP8Q6V1X1 898 aaPredicted RBP16.42■□□□□ 0.22
SGCE-203ENST00000425444 SAMD7Q7Z3H4 446 aa16.42■□□□□ 0.22
SGCE-203ENST00000425444 KIAA0100Q14667 2235 aaKnown RBP16.42■□□□□ 0.22
SGCE-203ENST00000425444 ADM5C9JUS6 153 aa16.41■□□□□ 0.22
SGCE-203ENST00000425444 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
SGCE-203ENST00000425444 CCDC27Q2M243 656 aa16.41■□□□□ 0.22
SGCE-203ENST00000425444 C3orf67Q6ZVT6 689 aa16.41■□□□□ 0.22
SGCE-203ENST00000425444 DCPSQ96C86 337 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms