RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CLSTN2Q9H4D0 955 aa13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 BIN1O00499 593 aa13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 SMC2O95347 1197 aa13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 GNAI3P08754 354 aa13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 IQCB1Q15051 598 aa13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 PPP1R13BQ96KQ4 1090 aa13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 GTF2A1P52655 376 aaPredicted RBP13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 E2F4Q16254 413 aa13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 TEX35Q5T0J7 233 aa13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 DRC1Q96MC2 740 aa13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 CYP46A1Q9Y6A2 500 aa13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 TECPR2O15040 1411 aa13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 FANCGO15287 622 aa13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 TMC6Q7Z403 805 aa13.23□□□□□ -0.29
SEC61A1-202ENST00000424880 BRD2P25440 801 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 PNPLA6Q8IY17 1366 aa13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 NOP2P46087 812 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 PSEN1P49768 467 aa13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 MUM1L1Q5H9M0 696 aa13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 MNS1Q8NEH6 495 aa13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 LRRC2Q9BYS8 371 aa13.22□□□□□ -0.29
SEC61A1-202ENST00000424880 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 GUCY1B3Q02153 619 aa13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 PI4K2BQ8TCG2 481 aa13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 NUDT16Q96DE0 195 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 SIRT1Q96EB6 747 aa13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 SIL1Q9H173 461 aa13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 PRR36Q9H6K5 1346 aa13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 PLEKHG1Q9ULL1 1385 aa13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 PTPRUQ92729 1446 aa13.21□□□□□ -0.29
SEC61A1-202ENST00000424880 PHACTR2O75167 634 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 ARMCX5Q6P1M9 558 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 LTBP4Q8N2S1 1624 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 NPHP3Q7Z494 1330 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 OS9Q13438 667 aaPredicted RBP13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 GOLPH3LQ9H4A5 285 aa13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
SEC61A1-202ENST00000424880 CPSF1Q10570 1443 aaKnown RBP13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 ZRANB2O95218 330 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 CTR9Q6PD62 1173 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 CHL1O00533 1208 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 MCM6Q14566 821 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 REXO1L1PQ8IX06 675 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 ADAM21Q9UKJ8 722 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 RRP15Q9Y3B9 282 aaKnown RBP13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 CPS1P31327 1500 aa13.19□□□□□ -0.3
SEC61A1-202ENST00000424880 TBC1D8O95759 1140 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 EVCP57679 992 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 SCAND2PQ9GZW5 306 aaPredicted RBP13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 CASQ1P31415 396 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 TPM4P67936 248 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 CNTROBQ8N137 903 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 TXLNBQ8N3L3 684 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 TTC21AQ8NDW8 1320 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 H3BQF6 201 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 H3BQV1 296 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 CHGBP05060 677 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 FLIIQ13045 1269 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 STAP2Q9UGK3 403 aa13.18□□□□□ -0.3
SEC61A1-202ENST00000424880 ATP7BP35670 1465 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 ARHGAP23Q9P227 1491 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 VPS53Q5VIR6 699 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 PACS2Q86VP3 889 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 BRF1Q92994 677 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 MRFAP1L1Q96HT8 127 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 UTP14AQ9BVJ6 771 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 EID1Q9Y6B2 187 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 CCDC93Q567U6 631 aa13.17□□□□□ -0.3
SEC61A1-202ENST00000424880 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms