RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SH3TC1Q8TE82 1336 aa22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 CHL1O00533 1208 aa22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 GRAPQ13588 217 aa22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 GRAPLQ8TC17 118 aaPredicted RBP22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 CDHR2Q9BYE9 1310 aa22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 TAF1P21675 1872 aa22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 GMPSP49915 693 aaPredicted RBP22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 CIAPIN1Q6FI81 312 aa22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 PAXIP1Q6ZW49 1069 aaPredicted RBP22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 TLL2Q9Y6L7 1015 aa22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 TNIP1Q15025 636 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 NEUROD2Q15784 382 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 CYP4F22Q6NT55 531 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 TMC4Q7Z404 712 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 GPR101Q96P66 508 aaPredicted RBP22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 PGAP2Q9UHJ9 254 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 KRT24Q2M2I5 525 aa22.03■■□□□ 1.12
UPF3AP3-201ENST00000420996 RAD17O75943 681 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 PLBD2Q8NHP8 589 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 ZC3H15Q8WU90 426 aaKnown RBP22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 BEGAINQ9BUH8 593 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 BCL2L13Q9BXK5 485 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 CHPF2Q9P2E5 772 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 LRRC37AA6NMS7 1700 aa22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 DDX60Q8IY21 1712 aaKnown RBP22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 GRM1Q13255 1194 aa22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 TRIM35Q9UPQ4 493 aa22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 MAP2K2P36507 400 aa22■■□□□ 1.11
UPF3AP3-201ENST00000420996 ANKRD13DQ6ZTN6 518 aa22■■□□□ 1.11
UPF3AP3-201ENST00000420996 RUNDC1Q96C34 613 aa22■■□□□ 1.11
UPF3AP3-201ENST00000420996 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
UPF3AP3-201ENST00000420996 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 YDJCA8MPS7 323 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 CELF2O95319 508 aaKnown RBP21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 HOXB7P09629 217 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 HIRAP54198 1017 aaPredicted RBP21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 HDGFL1Q5TGJ6 251 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 SAPCD2Q86UD0 394 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 HHIPL1Q96JK4 782 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 ISCA1Q9BUE6 129 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 CNOT7Q9UIV1 285 aaKnown RBP21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 MYBBP1AQ9BQG0 1328 aaKnown RBP21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 SF3B3Q15393 1217 aaKnown RBP21.98■■□□□ 1.11
UPF3AP3-201ENST00000420996 ABHD8Q96I13 439 aa21.98■■□□□ 1.11
UPF3AP3-201ENST00000420996 DBF4Q9UBU7 674 aaPredicted RBP21.98■■□□□ 1.11
UPF3AP3-201ENST00000420996 H7C1D1 291 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 AOC2O75106 756 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 CDC37L1Q7L3B6 337 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 ZNF428Q96B54 188 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 FAM89AQ96GI7 184 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 WASHC4Q2M389 1173 aa21.96■■□□□ 1.11
UPF3AP3-201ENST00000420996 TRPM4Q8TD43 1214 aa21.96■■□□□ 1.11
UPF3AP3-201ENST00000420996 DPF2Q92785 391 aa21.96■■□□□ 1.11
UPF3AP3-201ENST00000420996 ATP5J2-PTCD1G3V325 749 aa21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 WDR43Q15061 677 aaKnown RBP eCLIP21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 CELF1Q92879 486 aaKnown RBP21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 HYPKQ9NX55 129 aa21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 NSFL1CQ9UNZ2 370 aaKnown RBP21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 TRIM28Q13263 835 aaKnown RBP21.94■■□□□ 1.1
UPF3AP3-201ENST00000420996 MICALL2Q8IY33 904 aa21.94■■□□□ 1.1
UPF3AP3-201ENST00000420996 CFAP44Q96MT7 982 aa21.94■■□□□ 1.1
UPF3AP3-201ENST00000420996 SHTN1A0MZ66 631 aa21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 PSMD14O00487 310 aa21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 ZNF408Q9H9D4 720 aa21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 ADAMTS8Q9UP79 889 aa21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 ZBTB12Q9Y330 459 aaPredicted RBP21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 C6orf229H3BNL8 230 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 CA12O43570 354 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 DUSP27Q5VZP5 1158 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 DBNDD1Q9H9R9 158 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 POLLQ9UGP5 575 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 IRS4O14654 1257 aaPredicted RBP21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 RIMBP2O15034 1052 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 GPSM2P81274 684 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 USP48Q86UV5 1035 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 EYA3Q99504 573 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 TSKSQ9UJT2 592 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 POLR2AP24928 1970 aaKnown RBP21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 RPS12P25398 132 aaKnown RBP21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 RPS8P62241 208 aaKnown RBP21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 RTL5Q5HYW3 569 aaPredicted RBP21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 SAMD7Q7Z3H4 446 aa21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 COL4A1P02462 1669 aa21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 MBIPQ9NS73 344 aa21.89■■□□□ 1.09
UPF3AP3-201ENST00000420996 ECE2O60344 883 aa21.88■■□□□ 1.09
UPF3AP3-201ENST00000420996 ZBTB38Q8NAP3 1195 aaPredicted RBP21.88■■□□□ 1.09
UPF3AP3-201ENST00000420996 TBC1D16Q8TBP0 767 aa21.88■■□□□ 1.09
UPF3AP3-201ENST00000420996 ZNF853P0CG23 659 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 HSP90B1P14625 803 aaKnown RBP21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 NOGQ13253 232 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 DOK7Q18PE1 504 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 TBC1D10BQ4KMP7 808 aaPredicted RBP21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 KCNQ5Q9NR82 932 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 HUNKP57058 714 aa21.86■■□□□ 1.09
UPF3AP3-201ENST00000420996 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms