RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 GRIN2CQ14957 1233 aa7.59□□□□□ -1.19
TTC39DP-201ENST00000416781 FAM177A1Q8N128 213 aaPredicted RBP7.59□□□□□ -1.19
TTC39DP-201ENST00000416781 DMRTB1Q96MA1 342 aa7.59□□□□□ -1.19
TTC39DP-201ENST00000416781 C11orf16Q9NQ32 467 aa7.59□□□□□ -1.19
TTC39DP-201ENST00000416781 ANKRD33BA6NCL7 494 aa7.58□□□□□ -1.2
TTC39DP-201ENST00000416781 RBM25P49756 843 aaKnown RBP7.58□□□□□ -1.2
TTC39DP-201ENST00000416781 CCINQ13939 588 aa7.58□□□□□ -1.2
TTC39DP-201ENST00000416781 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
TTC39DP-201ENST00000416781 ZNF438Q7Z4V0 828 aa7.58□□□□□ -1.2
TTC39DP-201ENST00000416781 GPR161Q8N6U8 529 aaKnown RBP7.58□□□□□ -1.2
TTC39DP-201ENST00000416781 PNMA5Q96PV4 448 aa7.58□□□□□ -1.2
TTC39DP-201ENST00000416781 GPR182O15218 404 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 EGFRP00533 1210 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 BMP4P12644 408 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 MX2P20592 715 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 CTBSQ01459 385 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 GAS6Q14393 721 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 PDE12Q6L8Q7 609 aaKnown RBP7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 KRT25Q7Z3Z0 450 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 RAB44Q7Z6P3 723 aaPredicted RBP7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 CERS3Q8IU89 383 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 IRF7Q92985 503 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 PSMD1Q99460 953 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 SLC30A3Q99726 388 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 GSX2Q9BZM3 304 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 ERBB4Q15303 1308 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 ERCC3P19447 782 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 NEUROD1Q13562 356 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 BHMTQ93088 406 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 CCDC136Q96JN2 1154 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 PRR12Q9ULL5 1215 aa7.57□□□□□ -1.2
TTC39DP-201ENST00000416781 SASH3O75995 380 aa7.56□□□□□ -1.2
TTC39DP-201ENST00000416781 NFKB1P19838 968 aa7.56□□□□□ -1.2
TTC39DP-201ENST00000416781 NLRP13Q86W25 1043 aa7.56□□□□□ -1.2
TTC39DP-201ENST00000416781 MBIPQ9NS73 344 aa7.56□□□□□ -1.2
TTC39DP-201ENST00000416781 TREHO43280 583 aa7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 IGHA2P01877 340 aa7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 RARAP10276 462 aa7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 IRX6P78412 446 aaPredicted RBP7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 COL25A1Q9BXS0 654 aaPredicted RBP7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 ELP3Q9H9T3 547 aa7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 TMEM63CQ9P1W3 806 aa7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 NSFL1CQ9UNZ2 370 aaKnown RBP7.55□□□□□ -1.2
TTC39DP-201ENST00000416781 TARSP26639 723 aaKnown RBP7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 ZEB1P37275 1124 aaPredicted RBP7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 XKR5Q6UX68 686 aa7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 NPAS4Q8IUM7 802 aa7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 SNX29Q8TEQ0 813 aa7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 ALKBH8Q96BT7 664 aaKnown RBP7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 NIF3L1Q9GZT8 377 aa7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 EFCC1Q9HA90 598 aa7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 CWC22Q9HCG8 908 aaKnown RBP7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 ABI2Q9NYB9 513 aaPredicted RBP7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 C2CD2LO14523 706 aa7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 CENPBP07199 599 aaPredicted RBP7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 RNFT1Q5M7Z0 435 aa7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 ZSCAN1Q8NBB4 408 aa7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 NAP1L5Q96NT1 182 aaPredicted RBP7.54□□□□□ -1.2
TTC39DP-201ENST00000416781 TNFRSF21O75509 655 aa7.53□□□□□ -1.2
TTC39DP-201ENST00000416781 MAP2K3P46734 347 aa7.53□□□□□ -1.2
TTC39DP-201ENST00000416781 ZNF468Q5VIY5 522 aaPredicted RBP7.53□□□□□ -1.2
TTC39DP-201ENST00000416781 TTC39BQ5VTQ0 682 aaPredicted RBP7.53□□□□□ -1.2
TTC39DP-201ENST00000416781 TMED8Q6PL24 325 aaPredicted RBP7.53□□□□□ -1.2
TTC39DP-201ENST00000416781 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
TTC39DP-201ENST00000416781 FOXD3Q9UJU5 478 aaPredicted RBP7.53□□□□□ -1.2
TTC39DP-201ENST00000416781 PHACTR2O75167 634 aa7.52□□□□□ -1.21
TTC39DP-201ENST00000416781 MAPK8P45983 427 aa7.52□□□□□ -1.21
TTC39DP-201ENST00000416781 PLCB3Q01970 1234 aa7.52□□□□□ -1.21
TTC39DP-201ENST00000416781 FMR1Q06787 632 aaKnown RBP eCLIP7.52□□□□□ -1.21
TTC39DP-201ENST00000416781 ORC1Q13415 861 aa7.52□□□□□ -1.21
TTC39DP-201ENST00000416781 DSC3Q14574 896 aa7.52□□□□□ -1.21
TTC39DP-201ENST00000416781 SYT9Q86SS6 491 aa7.52□□□□□ -1.21
TTC39DP-201ENST00000416781 IGF1RP08069 1367 aa7.52□□□□□ -1.21
TTC39DP-201ENST00000416781 MMP20O60882 483 aa7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 P4HBP07237 508 aaKnown RBP7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 PCBP4P57723 403 aaKnown RBP7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 AVENQ9NQS1 362 aaPredicted RBP7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 USP35Q9P2H5 1018 aa7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 MAP3K6O95382 1288 aa7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 PSAPP07602 524 aa7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 KRT76Q01546 638 aa7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 CNTNAP3BQ96NU0 1288 aa7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
TTC39DP-201ENST00000416781 PNMA6FA0A0J9YX94 578 aa7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 PHF20L1A8MW92 1017 aa7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 E9PSI1 815 aa7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 EIF1AYO14602 144 aaKnown RBP7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 ARAFP10398 606 aa7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 ADH6P28332 368 aa7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 TBC1D8BQ0IIM8 1120 aa7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 COL19A1Q14993 1142 aa7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 EAPPQ56P03 285 aaPredicted RBP7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 DHX32Q7L7V1 743 aaKnown RBP7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 TLR7Q9NYK1 1049 aaKnown RBP7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 CNTN3Q9P232 1028 aa7.5□□□□□ -1.21
TTC39DP-201ENST00000416781 CPNE3O75131 537 aaKnown RBP7.49□□□□□ -1.21
TTC39DP-201ENST00000416781 SIN3BO75182 1162 aa7.49□□□□□ -1.21
TTC39DP-201ENST00000416781 CES1P23141 567 aa7.49□□□□□ -1.21
TTC39DP-201ENST00000416781 PLAURQ03405 335 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms