RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 KSR2Q6VAB6 950 aa15.78■□□□□ 0.12
SMARCA4-202ENST00000413806 BMP15O95972 392 aa15.77■□□□□ 0.12
SMARCA4-202ENST00000413806 LDHCP07864 332 aa15.77■□□□□ 0.12
SMARCA4-202ENST00000413806 SNW1Q13573 536 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-202ENST00000413806 KCNG4Q8TDN1 519 aa15.77■□□□□ 0.12
SMARCA4-202ENST00000413806 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-202ENST00000413806 PDE4BQ07343 736 aa15.77■□□□□ 0.12
SMARCA4-202ENST00000413806 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.12
SMARCA4-202ENST00000413806 WDR7Q9Y4E6 1490 aa15.77■□□□□ 0.12
SMARCA4-202ENST00000413806 NPC1L1Q9UHC9 1359 aa15.77■□□□□ 0.11
SMARCA4-202ENST00000413806 ATP5J2-PTCD1G3V325 749 aa15.77■□□□□ 0.11
SMARCA4-202ENST00000413806 POLKQ9UBT6 870 aa15.77■□□□□ 0.11
SMARCA4-202ENST00000413806 XRCC6P12956 609 aaKnown RBP eCLIP15.77■□□□□ 0.11
SMARCA4-202ENST00000413806 CALML4Q96GE6 196 aa15.77■□□□□ 0.11
SMARCA4-202ENST00000413806 KRT23Q9C075 422 aa15.77■□□□□ 0.11
SMARCA4-202ENST00000413806 EHMT1Q9H9B1 1298 aa15.77■□□□□ 0.11
SMARCA4-202ENST00000413806 FLT4P35916 1363 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 PAFAH1B1P43034 410 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 SF3B2Q13435 895 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 SPTY2D1Q68D10 685 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 CCDC82Q8N4S0 544 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 CUL5Q93034 780 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 TCP11L1Q9NUJ3 509 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 ASXL2Q76L83 1435 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 GRM8O00222 908 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 EXOC5O00471 708 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 MCMDC2Q4G0Z9 681 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 ZNF526Q8TF50 670 aaPredicted RBP15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 F13A1P00488 732 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 RAB3GAP1Q15042 981 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 LUZP1Q86V48 1076 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 BRF1Q92994 677 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 LRRC27Q9C0I9 530 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 ZBTB40Q9NUA8 1239 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 RSPH14Q9UHP6 348 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 NPATQ14207 1427 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 INSRP06213 1382 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 VAMP4O75379 141 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 USP48Q86UV5 1035 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
SMARCA4-202ENST00000413806 CEP85Q6P2H3 762 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 ABCC10Q5T3U5 1492 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 GPTP24298 496 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 TMTC2Q8N394 836 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 FAM200AQ8TCP9 573 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 ALS2CR12Q96Q35 445 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 CNNM2Q9H8M5 875 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 RMND1Q9NWS8 449 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 BIN1O00499 593 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 HCLS1P14317 486 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 CCDC96Q2M329 555 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 MICU3Q86XE3 530 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 SLC26A6Q9BXS9 759 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 CNPY2Q9Y2B0 182 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■■■■■ 30.1
SMARCA4-202ENST00000413806 CCDC178Q5BJE1 867 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 KAT14Q9H8E8 782 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 SNRKQ9NRH2 765 aa15.75■□□□□ 0.11
SMARCA4-202ENST00000413806 ZMYM4Q5VZL5 1548 aa15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 KLF18A0A0U1RQI7 1052 aa15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 IL15P40933 162 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 HAND2P61296 217 aa15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 GIMAP6Q6P9H5 292 aa15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 TRAPPC8Q9Y2L5 1435 aa15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 BAG3O95817 575 aa15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 SYKP43405 635 aa15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 CCDC91Q7Z6B0 441 aa15.74■□□□□ 0.11
SMARCA4-202ENST00000413806 PZPP20742 1482 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 CEBPAP49715 358 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 DDX46Q7L014 1031 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 NECAB1Q8N987 351 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 XAGE3Q8WTP9 111 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 INTS4Q96HW7 963 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 RAD50Q92878 1312 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 MICALL1Q8N3F8 863 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 EHBP1Q8NDI1 1231 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 CPLX3Q8WVH0 158 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 MRPS27Q92552 414 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 CCDC113Q9H0I3 377 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 NOLC1Q14978 699 aaKnown RBP eCLIP15.73■□□□□ 0.117e-6■□□□□ 9
SMARCA4-202ENST00000413806 RASSF4Q9H2L5 321 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 NAA15Q9BXJ9 866 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 TMX1Q9H3N1 280 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 MAP3K5Q99683 1374 aa15.73■□□□□ 0.11
SMARCA4-202ENST00000413806 TUBB4AP04350 444 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 CCDC175P0C221 793 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 WTAPQ15007 396 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 CTAGE1Q96RT6 745 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 ZBTB43O43298 467 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 RLBP1P12271 317 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 SMC1AQ14683 1233 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 CCDC152Q4G0S7 254 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 CRNKL1Q9BZJ0 848 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 FBLN1P23142 703 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 GSTO1P78417 241 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 MAST1Q9Y2H9 1570 aa15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 MTHFSDQ2M296 383 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-202ENST00000413806 ANO6Q4KMQ2 910 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms