RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 MORC3Q14149 939 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 DALRD3Q5D0E6 543 aaKnown RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 AXDND1Q5T1B0 1012 aaPredicted RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 ACBD5Q5T8D3 534 aaPredicted RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 ZKSCAN2Q63HK3 967 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 SLC4A10Q6U841 1118 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 HDGFL2Q7Z4V5 671 aaPredicted RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 ENOX1Q8TC92 643 aaKnown RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 EMID1Q96A84 441 aaPredicted RBP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 OCSTAMPQ9BR26 566 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 RBSNQ9H1K0 784 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 AS3MTQ9HBK9 375 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 MCM8Q9UJA3 840 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 PLAAQ9Y263 795 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 PCDHGA4Q9Y5G9 962 aa7.34□□□□□ -1.23
CBX1P3-201ENST00000413296 RPGRIP1LQ68CZ1 1315 aa7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 MYL3P08590 195 aa7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 VDRP11473 427 aa7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 CCDC70Q6NSX1 233 aa7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 GJD3Q8N144 294 aa7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 SECISBP2LQ93073 1101 aaKnown RBP7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 GINM1Q9NU53 330 aa7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 MAP10Q9P2G4 905 aa7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 ZNF69Q9UC07 566 aa7.33□□□□□ -1.24
CBX1P3-201ENST00000413296 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 RAB27AP51159 221 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 RASGRF1Q13972 1273 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 C2orf27AQ580R0 203 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 PACS2Q86VP3 889 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 SYNPOQ8N3V7 929 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 ABTB2Q8N961 1025 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 CPLX3Q8WVH0 158 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 SCG3Q8WXD2 468 aaKnown RBP7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 ANAPC16Q96DE5 110 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 RSPH9Q9H1X1 276 aaPredicted RBP7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 PTPRHQ9HD43 1115 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 KBTBD4Q9NVX7 518 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 TAGLN3Q9UI15 199 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 POLIQ9UNA4 740 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 FRMD4BQ9Y2L6 1034 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 EIF4G1Q04637 1599 aaKnown RBP7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 UNC13AQ9UPW8 1703 aa7.32□□□□□ -1.24
CBX1P3-201ENST00000413296 KDM4FA0A1W2PPD8 638 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 SMAPO00193 183 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 WASLO00401 505 aaPredicted RBP7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 GIPC1O14908 333 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 PDPK1O15530 556 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 ASMTLO95671 621 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 COL9A1P20849 921 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 ATP6V1AP38606 617 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 CASP2P42575 452 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 SOX9P48436 509 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 NFKB2Q00653 900 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 EVX2Q03828 476 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 CT47A1Q5JQC4 288 aaPredicted RBP7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 CREBRFQ8IUR6 639 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 ADAM32Q8TC27 787 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 FBXO41Q8TF61 875 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 GPKOWQ92917 476 aaPredicted RBP eCLIP7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 KCNH8Q96L42 1107 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 ZIM2Q9NZV7 527 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 PPP2R3BQ9Y5P8 575 aa7.31□□□□□ -1.24
CBX1P3-201ENST00000413296 EIF1AYO14602 144 aaKnown RBP7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 OPLAHO14841 1288 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 IFIT2P09913 472 aaKnown RBP7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 STAT3P40763 770 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 USP4Q13107 963 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 ORC1Q13415 861 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 SIM2Q14190 667 aaPredicted RBP7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 ALFQ53S48 1182 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 GET4Q7L5D6 327 aaPredicted RBP7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 THNSL2Q86YJ6 484 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 SMAP1Q8IYB5 467 aaPredicted RBP7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 SPICE1Q8N0Z3 855 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 CCDC89Q8N998 374 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 THAP3Q8WTV1 239 aaPredicted RBP7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 CAAP1Q9H8G2 361 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 CD2APQ9Y5K6 639 aa7.3□□□□□ -1.24
CBX1P3-201ENST00000413296 DYTNA2CJ06 578 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 SLC26A4O43511 780 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 AKAP10O43572 662 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 GALR2O43603 387 aaPredicted RBP7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 MYCLP1P12525 358 aaPredicted RBP7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 COL9A2Q14055 689 aaPredicted RBP7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 CCDC184Q52MB2 194 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 TNNI3KQ59H18 835 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 CELF2-AS1Q8N7Q2 184 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 ARMC2Q8NEN0 867 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 DNAJC25Q9H1X3 360 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 ZNF358Q9NW07 568 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 PCDH10Q9P2E7 1040 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 ADAMTS1Q9UHI8 967 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 PDZRN3Q9UPQ7 1066 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 ATAD2Q6PL18 1390 aa7.29□□□□□ -1.24
CBX1P3-201ENST00000413296 GOLGA6CA6NDK9 693 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 GOLGA6BA6NDN3 693 aa7.28□□□□□ -1.24
CBX1P3-201ENST00000413296 TRIM6-TRIM34B2RNG4 842 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms