RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 GRNP28799 593 aaKnown RBP6.9□□□□□ -1.3
BRCA1-204ENST00000412061 ITGAEP38570 1179 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 KCNQ4P56696 695 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-204ENST00000412061 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 FBF1Q8TES7 1133 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 GMCL1Q96IK5 515 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 ELP3Q9H9T3 547 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 WWC3Q9ULE0 1092 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 KCNH4Q9UQ05 1017 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 TNFRSF21O75509 655 aa6.89□□□□□ -1.31
BRCA1-204ENST00000412061 THBS1P07996 1170 aa6.89□□□□□ -1.31
BRCA1-204ENST00000412061 LAMC2Q13753 1193 aa6.89□□□□□ -1.31
BRCA1-204ENST00000412061 TRIM22Q8IYM9 498 aa6.89□□□□□ -1.31
BRCA1-204ENST00000412061 FAM177A1Q8N128 213 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-204ENST00000412061 DUSP9Q99956 384 aaKnown RBP6.89□□□□□ -1.31
BRCA1-204ENST00000412061 DCDC2BA2VCK2 349 aa6.88□□□□□ -1.31
BRCA1-204ENST00000412061 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
BRCA1-204ENST00000412061 EFSO43281 561 aa6.88□□□□□ -1.31
BRCA1-204ENST00000412061 PHACTR2O75167 634 aa6.88□□□□□ -1.31
BRCA1-204ENST00000412061 DBN1Q16643 649 aa6.88□□□□□ -1.31
BRCA1-204ENST00000412061 NLRP13Q86W25 1043 aa6.88□□□□□ -1.31
BRCA1-204ENST00000412061 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
BRCA1-204ENST00000412061 FOXD3Q9UJU5 478 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-204ENST00000412061 VSIG8P0DPA2 414 aa6.87□□□□□ -1.31
BRCA1-204ENST00000412061 MAPTP10636 758 aaKnown RBP6.87□□□□□ -1.31
BRCA1-204ENST00000412061 ITGA6P23229 1130 aa6.87□□□□□ -1.31
BRCA1-204ENST00000412061 TNP2Q05952 138 aa6.87□□□□□ -1.31
BRCA1-204ENST00000412061 SFSWAPQ12872 951 aaKnown RBP6.87□□□□□ -1.31
BRCA1-204ENST00000412061 UBAP2LQ14157 1087 aaKnown RBP6.87□□□□□ -1.31
BRCA1-204ENST00000412061 SETDB2Q96T68 719 aa6.87□□□□□ -1.31
BRCA1-204ENST00000412061 MRS2Q9HD23 443 aa6.87□□□□□ -1.31
BRCA1-204ENST00000412061 CUEDC1Q9NWM3 386 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-204ENST00000412061 TMEM63CQ9P1W3 806 aa6.87□□□□□ -1.31
BRCA1-204ENST00000412061 DAB2P98082 770 aa6.86□□□□□ -1.31
BRCA1-204ENST00000412061 PSMD2Q13200 908 aa6.86□□□□□ -1.31
BRCA1-204ENST00000412061 CCINQ13939 588 aa6.86□□□□□ -1.31
BRCA1-204ENST00000412061 TTC39BQ5VTQ0 682 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-204ENST00000412061 TMC4Q7Z404 712 aa6.86□□□□□ -1.31
BRCA1-204ENST00000412061 ZNF837Q96EG3 531 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-204ENST00000412061 ZFYVE28Q9HCC9 887 aa6.86□□□□□ -1.31
BRCA1-204ENST00000412061 NDFIP2Q9NV92 336 aa6.86□□□□□ -1.31
BRCA1-204ENST00000412061 ABI2Q9NYB9 513 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-204ENST00000412061 MARK1Q9P0L2 795 aa6.86□□□□□ -1.31
BRCA1-204ENST00000412061 BNIP3LO60238 219 aa6.85□□□□□ -1.31
BRCA1-204ENST00000412061 MRPL58Q14197 206 aaKnown RBP6.85□□□□□ -1.31
BRCA1-204ENST00000412061 PMEPA1Q969W9 287 aa6.85□□□□□ -1.31
BRCA1-204ENST00000412061 FRMD6Q96NE9 622 aa6.85□□□□□ -1.31
BRCA1-204ENST00000412061 CFHR5Q9BXR6 569 aa6.85□□□□□ -1.31
BRCA1-204ENST00000412061 GSX2Q9BZM3 304 aa6.85□□□□□ -1.31
BRCA1-204ENST00000412061 ATXN7L1Q9ULK2 861 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-204ENST00000412061 PHF24Q9UPV7 400 aa6.85□□□□□ -1.31
BRCA1-204ENST00000412061 SORBS3O60504 671 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 SASH3O75995 380 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 GNA15P30679 374 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 TSNAXIP1Q2TAA8 658 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 USPL1Q5W0Q7 1092 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 FOXR1Q6PIV2 292 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 GTPBP3Q969Y2 492 aaKnown RBP6.84□□□□□ -1.31
BRCA1-204ENST00000412061 CCDC74AQ96AQ1 378 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 ABHD17AQ96GS6 310 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 FAM161BQ96MY7 647 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 PNMA5Q96PV4 448 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 EFCC1Q9HA90 598 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 STRN4Q9NRL3 753 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 SPG7Q9UQ90 795 aa6.84□□□□□ -1.31
BRCA1-204ENST00000412061 RECKO95980 971 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 RARAP10276 462 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 TCF3P15923 654 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 TARSP26639 723 aaKnown RBP6.83□□□□□ -1.32
BRCA1-204ENST00000412061 GSK3AP49840 483 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 KRT25Q7Z3Z0 450 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 C1orf127Q8N9H9 656 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 TRERF1Q96PN7 1200 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 CHRDQ9H2X0 955 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 RNF19AQ9NV58 838 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 NLRP2Q9NX02 1062 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 CNTN3Q9P232 1028 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 VTI1BQ9UEU0 232 aa6.83□□□□□ -1.32
BRCA1-204ENST00000412061 PPFIA3O75145 1194 aa6.82□□□□□ -1.32
BRCA1-204ENST00000412061 CD33P20138 364 aa6.82□□□□□ -1.32
BRCA1-204ENST00000412061 CES1P23141 567 aa6.82□□□□□ -1.32
BRCA1-204ENST00000412061 SPEM2Q0P670 501 aa6.82□□□□□ -1.32
BRCA1-204ENST00000412061 SUZ12Q15022 739 aaKnown RBP6.82□□□□□ -1.32
BRCA1-204ENST00000412061 GALNT12Q8IXK2 581 aa6.82□□□□□ -1.32
BRCA1-204ENST00000412061 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-204ENST00000412061 CDC14CA4D256 554 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 PHF20L1A8MW92 1017 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 GIPC1O14908 333 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 EREGO14944 169 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 MMP20O60882 483 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 NFKB1P19838 968 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 FGFR3P22607 806 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 NEUROD1Q13562 356 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.81□□□□□ -1.32
BRCA1-204ENST00000412061 FAM182BQ5T319 152 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 OR13H1Q8NG92 308 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 SLC30A3Q99726 388 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 BACH2Q9BYV9 841 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 NPHS2Q9NP85 383 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms