RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 HSP90AB4PQ58FF6 505 aa25.16■■□□□ 1.62
PTPA-208ENST00000411917 SYNE4Q8N205 404 aa25.16■■□□□ 1.62
PTPA-208ENST00000411917 NLRP3Q96P20 1036 aa25.16■■□□□ 1.62
PTPA-208ENST00000411917 PDZRN3Q9UPQ7 1066 aa25.16■■□□□ 1.62
PTPA-208ENST00000411917 RFX5P48382 616 aaPredicted RBP25.15■■□□□ 1.62
PTPA-208ENST00000411917 CRY2Q49AN0 593 aa25.15■■□□□ 1.62
PTPA-208ENST00000411917 RTL5Q5HYW3 569 aaPredicted RBP25.15■■□□□ 1.62
PTPA-208ENST00000411917 JARID2Q92833 1246 aaPredicted RBP25.15■■□□□ 1.62
PTPA-208ENST00000411917 BRIP1Q9BX63 1249 aa25.15■■□□□ 1.62
PTPA-208ENST00000411917 B4GALNT3Q6L9W6 998 aa25.14■■□□□ 1.62
PTPA-208ENST00000411917 HCLS1P14317 486 aaPredicted RBP25.13■■□□□ 1.61
PTPA-208ENST00000411917 R3HDM1Q15032 1099 aaKnown RBP25.13■■□□□ 1.61
PTPA-208ENST00000411917 FAM177BA6PVY3 158 aa25.12■■□□□ 1.61
PTPA-208ENST00000411917 RAB11FIP3O75154 756 aa25.12■■□□□ 1.61
PTPA-208ENST00000411917 IFIT5Q13325 482 aaKnown RBP25.12■■□□□ 1.61
PTPA-208ENST00000411917 CCDC57Q2TAC2 916 aa25.12■■□□□ 1.61
PTPA-208ENST00000411917 PDGFDQ9GZP0 370 aaPredicted RBP25.12■■□□□ 1.61
PTPA-208ENST00000411917 LRP5O75197 1615 aa25.12■■□□□ 1.61
PTPA-208ENST00000411917 NPHP1O15259 732 aa25.11■■□□□ 1.61
PTPA-208ENST00000411917 PTPN12Q05209 780 aaKnown RBP25.11■■□□□ 1.61
PTPA-208ENST00000411917 ANKRD18BA2A2Z9 1011 aa25.1■■□□□ 1.61
PTPA-208ENST00000411917 CIAO1O76071 339 aa25.1■■□□□ 1.61
PTPA-208ENST00000411917 ERC1Q8IUD2 1116 aa25.1■■□□□ 1.61
PTPA-208ENST00000411917 C10orf71Q711Q0 1435 aa25.1■■□□□ 1.61
PTPA-208ENST00000411917 ITGA6P23229 1130 aa25.09■■□□□ 1.61
PTPA-208ENST00000411917 HOXA10P31260 410 aaPredicted RBP25.09■■□□□ 1.61
PTPA-208ENST00000411917 PDE6BP35913 854 aa25.09■■□□□ 1.61
PTPA-208ENST00000411917 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
PTPA-208ENST00000411917 MSL1Q68DK7 614 aa25.09■■□□□ 1.61
PTPA-208ENST00000411917 GREM2Q9H772 168 aa25.09■■□□□ 1.61
PTPA-208ENST00000411917 CDC5LQ99459 802 aaKnown RBP25.08■■□□□ 1.61
PTPA-208ENST00000411917 SGIP1Q9BQI5 828 aa25.08■■□□□ 1.61
PTPA-208ENST00000411917 TNRC6CQ9HCJ0 1690 aaKnown RBP25.07■■□□□ 1.6
PTPA-208ENST00000411917 POLD1P28340 1107 aa25.07■■□□□ 1.6
PTPA-208ENST00000411917 SURF6O75683 361 aaKnown RBP25.05■■□□□ 1.6
PTPA-208ENST00000411917 IL15P40933 162 aaPredicted RBP25.05■■□□□ 1.6
PTPA-208ENST00000411917 C3orf67Q6ZVT6 689 aa25.05■■□□□ 1.6
PTPA-208ENST00000411917 CHMP3Q9Y3E7 222 aa25.05■■□□□ 1.6
PTPA-208ENST00000411917 EYA2O00167 538 aa25.04■■□□□ 1.6
PTPA-208ENST00000411917 SOCS7O14512 581 aa25.04■■□□□ 1.6
PTPA-208ENST00000411917 NUCB1Q02818 461 aa25.04■■□□□ 1.6
PTPA-208ENST00000411917 KIF1BPQ96EK5 621 aa25.04■■□□□ 1.6
PTPA-208ENST00000411917 CRAMP1Q96RY5 1269 aa25.04■■□□□ 1.6
PTPA-208ENST00000411917 G3BP1Q13283 466 aaKnown RBP eCLIP25.03■■□□□ 1.6
PTPA-208ENST00000411917 DDX46Q7L014 1031 aaKnown RBP25.03■■□□□ 1.6
PTPA-208ENST00000411917 TMC4Q7Z404 712 aa25.03■■□□□ 1.6
PTPA-208ENST00000411917 KIF13BQ9NQT8 1826 aa25.02■■□□□ 1.6
PTPA-208ENST00000411917 ANKRD31Q8N7Z5 1873 aa25.02■■□□□ 1.6
PTPA-208ENST00000411917 ZBTB7AO95365 584 aa25.01■■□□□ 1.59
PTPA-208ENST00000411917 SRGNP10124 158 aa25.01■■□□□ 1.59
PTPA-208ENST00000411917 NPR1P16066 1061 aa25.01■■□□□ 1.59
PTPA-208ENST00000411917 IGHMBP2P38935 993 aaKnown RBP25.01■■□□□ 1.59
PTPA-208ENST00000411917 GRAPQ13588 217 aa25.01■■□□□ 1.59
PTPA-208ENST00000411917 TAF7LQ5H9L4 462 aa25.01■■□□□ 1.59
PTPA-208ENST00000411917 GRAPLQ8TC17 118 aaPredicted RBP25.01■■□□□ 1.59
PTPA-208ENST00000411917 RBM17Q96I25 401 aaKnown RBP25.01■■□□□ 1.59
PTPA-208ENST00000411917 LRRCC1Q9C099 1032 aa25.01■■□□□ 1.59
PTPA-208ENST00000411917 GPR108Q9NPR9 543 aa25.01■■□□□ 1.59
PTPA-208ENST00000411917 BSDC1Q9NW68 430 aaPredicted RBP25.01■■□□□ 1.59
PTPA-208ENST00000411917 EXOC6BQ9Y2D4 811 aa25.01■■□□□ 1.59
PTPA-208ENST00000411917 ATG9AQ7Z3C6 839 aa25■■□□□ 1.59
PTPA-208ENST00000411917 ANKRD18AQ8IVF6 992 aa25■■□□□ 1.59
PTPA-208ENST00000411917 RHPN1Q8TCX5 695 aa25■■□□□ 1.59
PTPA-208ENST00000411917 RPGRQ92834 1020 aaKnown RBP25■■□□□ 1.59
PTPA-208ENST00000411917 PA2G4Q9UQ80 394 aaKnown RBP25■■□□□ 1.59
PTPA-208ENST00000411917 RIPOR2Q9Y4F9 1068 aa25■■□□□ 1.59
PTPA-208ENST00000411917 PSDA5PKW4 1024 aaPredicted RBP24.99■■□□□ 1.59
PTPA-208ENST00000411917 PTGER2P43116 358 aa24.99■■□□□ 1.59
PTPA-208ENST00000411917 STYK1Q6J9G0 422 aa24.99■■□□□ 1.59
PTPA-208ENST00000411917 LDHAL6AQ6ZMR3 332 aa24.99■■□□□ 1.59
PTPA-208ENST00000411917 MROH5Q6ZUA9 1318 aa24.99■■□□□ 1.59
PTPA-208ENST00000411917 CHD1LQ86WJ1 897 aa24.99■■□□□ 1.59
PTPA-208ENST00000411917 MASTLQ96GX5 879 aa24.99■■□□□ 1.59
PTPA-208ENST00000411917 BBOX1O75936 387 aa24.98■■□□□ 1.59
PTPA-208ENST00000411917 RPS8P62241 208 aaKnown RBP24.98■■□□□ 1.59
PTPA-208ENST00000411917 SEC31BQ9NQW1 1179 aa24.98■■□□□ 1.59
PTPA-208ENST00000411917 ALDH1B1P30837 517 aa24.97■■□□□ 1.59
PTPA-208ENST00000411917 TGFB2P61812 414 aa24.97■■□□□ 1.59
PTPA-208ENST00000411917 KLHDC4Q8TBB5 520 aa24.97■■□□□ 1.59
PTPA-208ENST00000411917 MPHOSPH8Q99549 860 aa24.97■■□□□ 1.59
PTPA-208ENST00000411917 SPON1Q9HCB6 807 aa24.97■■□□□ 1.59
PTPA-208ENST00000411917 ZBTB47Q9UFB7 747 aaPredicted RBP24.97■■□□□ 1.59
PTPA-208ENST00000411917 CD2APQ9Y5K6 639 aa24.97■■□□□ 1.59
PTPA-208ENST00000411917 SASH1O94885 1247 aa24.96■■□□□ 1.59
PTPA-208ENST00000411917 CCDC24Q8N4L8 307 aa24.96■■□□□ 1.59
PTPA-208ENST00000411917 CCDC85AQ96PX6 553 aaPredicted RBP24.96■■□□□ 1.59
PTPA-208ENST00000411917 H0YIN7 160 aa24.95■■□□□ 1.58
PTPA-208ENST00000411917 OS9Q13438 667 aaPredicted RBP24.95■■□□□ 1.58
PTPA-208ENST00000411917 ANKRD45Q5TZF3 282 aa24.95■■□□□ 1.58
PTPA-208ENST00000411917 ZNF594Q96JF6 807 aaPredicted RBP24.95■■□□□ 1.58
PTPA-208ENST00000411917 ATF5Q9Y2D1 282 aaPredicted RBP24.95■■□□□ 1.58
PTPA-208ENST00000411917 VGLL2Q8N8G2 317 aa24.94■■□□□ 1.58
PTPA-208ENST00000411917 CELF1Q92879 486 aaKnown RBP24.94■■□□□ 1.58
PTPA-208ENST00000411917 SIL1Q9H173 461 aa24.94■■□□□ 1.58
PTPA-208ENST00000411917 CNNM1Q9NRU3 951 aa24.94■■□□□ 1.58
PTPA-208ENST00000411917 COL11A2P13942 1736 aaPredicted RBP24.93■■□□□ 1.58
PTPA-208ENST00000411917 LRRC24Q50LG9 513 aa24.93■■□□□ 1.58
PTPA-208ENST00000411917 CLASRPQ8N2M8 674 aaKnown RBP24.93■■□□□ 1.58
PTPA-208ENST00000411917 CNKSR1Q969H4 720 aa24.93■■□□□ 1.58
PTPA-208ENST00000411917 CEP126Q9P2H0 1117 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms