RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 SMC5Q8IY18 1101 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 DHX38Q92620 1227 aaKnown RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 MED4Q9NPJ6 270 aa6□□□□□ -1.45
R3HDM1-204ENST00000410054 TRMT1Q9NXH9 659 aaKnown RBP6□□□□□ -1.45
R3HDM1-204ENST00000410054 TRIM64A6NGJ6 449 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 TRIM64BA6NI03 449 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 PHLDB2Q86SQ0 1253 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 HS6ST3Q8IZP7 471 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 EHBP1Q8NDI1 1231 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 HELBQ8NG08 1087 aaPredicted RBP5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 HELLSQ9NRZ9 838 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 ETAA1Q9NY74 926 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 MAP3K20Q9NYL2 800 aaKnown RBP5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 TACC1O75410 805 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 CETN2P41208 172 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 OLR1P78380 273 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 IQCF2Q8IXL9 164 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 ZNF189O75820 626 aaPredicted RBP5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 LDHAP00338 332 aaKnown RBP5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 CCDC38Q502W7 563 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 DPH6Q7L8W6 267 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 TNIP2Q8NFZ5 429 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 BICD2Q8TD16 824 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 CCT6BQ92526 530 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 PMM1Q92871 262 aa5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 TACO1Q9BSH4 297 aaKnown RBP5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 DHX36Q9H2U1 1008 aaKnown RBP5.99□□□□□ -1.45
R3HDM1-204ENST00000410054 GOLGA8QA0A0J9YX86 632 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 GOLGA8OA6NCC3 632 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 GOLGA8NF8WBI6 632 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 DIAPH2O60879 1101 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 MAN1A1P33908 653 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 NEK2P51955 445 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 TUBA1BP68363 451 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 PPP2R5CQ13362 524 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 PLS1Q14651 629 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 TUBA1AQ71U36 451 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 STX12Q86Y82 276 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 KIF18AQ8NI77 898 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 NINLQ9Y2I6 1382 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 CPLX1O14810 134 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 ABL1P00519 1130 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 ECE1P42892 770 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 ASPHQ12797 758 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 CETN1Q12798 172 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 LAMB3Q13751 1172 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 HLTFQ14527 1009 aaKnown RBP eCLIP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 ODR4Q5SWX8 454 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 SPATS2Q86XZ4 545 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 DTNBP1Q96EV8 351 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 MAGED1Q9Y5V3 778 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 HNRNPCL2B2RXH8 293 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 HNRNPCL1O60812 293 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 E2F4Q16254 413 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 BBOF1Q8ND07 529 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 ALS2CR12Q96Q35 445 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 TTC1Q99614 292 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 HSPA1AP0DMV8 641 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 HSPA1BP0DMV9 641 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 HPDP32754 393 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 NOP2P46087 812 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 IRF5Q13568 498 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 MUM1Q2TAK8 710 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 KAZNQ674X7 775 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 ZNF662Q6ZS27 426 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 APLFQ8IW19 511 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 SYNPO2Q9UMS6 1093 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 SNX5Q9Y5X3 404 aa5.98□□□□□ -1.45
R3HDM1-204ENST00000410054 FAM170AA1A519 330 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 PDHA1P08559 390 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 CCDC159P0C7I6 412 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 GUCY2CP25092 1073 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 HSPA1LP34931 641 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 LMAN1P49257 510 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 ARPC4P59998 168 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 SOGA3Q5TF21 947 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 OTUD6AQ7L8S5 288 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 CCDC50Q8IVM0 306 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 NACA2Q9H009 215 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 DRC3Q9H069 523 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 TNMDQ9H2S6 317 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 TMEM165Q9HC07 324 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 CNGB3Q9NQW8 809 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 CARD8Q9Y2G2 431 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 THRAP3Q9Y2W1 955 aaKnown RBP5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 RPGRIP1LQ68CZ1 1315 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 B3GALNT1O75752 331 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 WASHC5Q12768 1159 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 KIAA0753Q2KHM9 967 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 KIF6Q6ZMV9 814 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 JMYQ8N9B5 988 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 AP1M1Q9BXS5 423 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 PFDN4Q9NQP4 134 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 RYDENQ9NUL5 291 aaKnown RBP5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 MIS18AQ9NYP9 233 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 SUGT1Q9Y2Z0 365 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 CARNS1A5YM72 827 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 TBC1D8O95759 1140 aa5.97□□□□□ -1.45
R3HDM1-204ENST00000410054 SFSWAPQ12872 951 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms