RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TRPM4Q8TD43 1214 aa8.64□□□□□ -1.03
CLK1-203ENST00000409769 TTC9Q92623 222 aa8.64□□□□□ -1.03
CLK1-203ENST00000409769 RFX1P22670 979 aa8.63□□□□□ -1.03
CLK1-203ENST00000409769 ITGB7P26010 798 aa8.63□□□□□ -1.03
CLK1-203ENST00000409769 GPLD1P80108 840 aa8.63□□□□□ -1.03
CLK1-203ENST00000409769 ZMYM1Q5SVZ6 1142 aa8.63□□□□□ -1.03
CLK1-203ENST00000409769 ILDR2Q71H61 639 aa8.63□□□□□ -1.03
CLK1-203ENST00000409769 DHX32Q7L7V1 743 aaKnown RBP8.63□□□□□ -1.03
CLK1-203ENST00000409769 TXNRD3Q86VQ6 643 aa8.63□□□□□ -1.03
CLK1-203ENST00000409769 NAGPAQ9UK23 515 aa8.63□□□□□ -1.03
CLK1-203ENST00000409769 DYRK3O43781 588 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 LGR5O75473 907 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 EGFRP00533 1210 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 H2AFB2P0C5Z0 115 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 RARAP10276 462 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 SELPP16109 830 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 MBTPS1Q14703 1052 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 MSL1Q68DK7 614 aa8.62□□□□□ -1.03
CLK1-203ENST00000409769 FMR1NBQ8N0W7 255 aaPredicted RBP8.62□□□□□ -1.03
CLK1-203ENST00000409769 GRNP28799 593 aaKnown RBP8.61□□□□□ -1.03
CLK1-203ENST00000409769 ELMSAN1Q6PJG2 1045 aa8.61□□□□□ -1.03
CLK1-203ENST00000409769 ACIN1Q9UKV3 1341 aaKnown RBP8.6□□□□□ -1.03
CLK1-203ENST00000409769 CPB1P15086 417 aa8.6□□□□□ -1.03
CLK1-203ENST00000409769 NRLP54845 237 aa8.6□□□□□ -1.03
CLK1-203ENST00000409769 ELOAQ14241 798 aaKnown RBP8.6□□□□□ -1.03
CLK1-203ENST00000409769 DMRTC2Q8IXT2 367 aaPredicted RBP8.6□□□□□ -1.03
CLK1-203ENST00000409769 IFT43Q96FT9 208 aa8.6□□□□□ -1.03
CLK1-203ENST00000409769 LPIN3Q9BQK8 851 aa8.6□□□□□ -1.03
CLK1-203ENST00000409769 NOVA2Q9UNW9 492 aaKnown RBP8.6□□□□□ -1.03
CLK1-203ENST00000409769 KRT25Q7Z3Z0 450 aa8.59□□□□□ -1.03
CLK1-203ENST00000409769 ZFATQ9P243 1243 aa8.59□□□□□ -1.03
CLK1-203ENST00000409769 TARSP26639 723 aaKnown RBP8.58□□□□□ -1.04
CLK1-203ENST00000409769 PERM1Q5SV97 790 aa8.58□□□□□ -1.04
CLK1-203ENST00000409769 WFDC8Q8IUA0 241 aa8.58□□□□□ -1.04
CLK1-203ENST00000409769 COL26A1Q96A83 441 aa8.58□□□□□ -1.04
CLK1-203ENST00000409769 TLR7Q9NYK1 1049 aaKnown RBP8.58□□□□□ -1.04
CLK1-203ENST00000409769 USP21Q9UK80 565 aa8.58□□□□□ -1.04
CLK1-203ENST00000409769 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
CLK1-203ENST00000409769 SASH3O75995 380 aa8.57□□□□□ -1.04
CLK1-203ENST00000409769 GRIK5Q16478 980 aa8.57□□□□□ -1.04
CLK1-203ENST00000409769 FBXO11Q86XK2 927 aa8.57□□□□□ -1.04
CLK1-203ENST00000409769 TREML1Q86YW5 311 aa8.57□□□□□ -1.04
CLK1-203ENST00000409769 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
CLK1-203ENST00000409769 SERPINA10Q9UK55 444 aa8.57□□□□□ -1.04
CLK1-203ENST00000409769 LRFN2Q9ULH4 789 aa8.57□□□□□ -1.04
CLK1-203ENST00000409769 ZBTB42B2RXF5 422 aa8.56□□□□□ -1.04
CLK1-203ENST00000409769 OPLAHO14841 1288 aa8.56□□□□□ -1.04
CLK1-203ENST00000409769 XYLBO75191 536 aa8.56□□□□□ -1.04
CLK1-203ENST00000409769 PSAPP07602 524 aa8.56□□□□□ -1.04
CLK1-203ENST00000409769 SOX18P35713 384 aa8.56□□□□□ -1.04
CLK1-203ENST00000409769 PLAURQ03405 335 aa8.56□□□□□ -1.04
CLK1-203ENST00000409769 RBSNQ9H1K0 784 aa8.56□□□□□ -1.04
CLK1-203ENST00000409769 FAM13BQ9NYF5 915 aa8.56□□□□□ -1.04
CLK1-203ENST00000409769 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
CLK1-203ENST00000409769 BRD2P25440 801 aaKnown RBP8.55□□□□□ -1.04
CLK1-203ENST00000409769 FKBP5Q13451 457 aaPredicted RBP8.55□□□□□ -1.04
CLK1-203ENST00000409769 IGF2-ASQ6U949 168 aa8.55□□□□□ -1.04
CLK1-203ENST00000409769 SHISA2Q6UWI4 295 aa8.55□□□□□ -1.04
CLK1-203ENST00000409769 CACTIN-AS1Q8N1I8 211 aa8.55□□□□□ -1.04
CLK1-203ENST00000409769 SRA1Q9HD15 236 aaKnown RBP8.55□□□□□ -1.04
CLK1-203ENST00000409769 EIF2AK2P19525 551 aaKnown RBP8.54□□□□□ -1.04
CLK1-203ENST00000409769 PRSS36Q5K4E3 855 aa8.54□□□□□ -1.04
CLK1-203ENST00000409769 COX20Q5RI15 118 aa8.54□□□□□ -1.04
CLK1-203ENST00000409769 C16orf46Q6P387 395 aa8.54□□□□□ -1.04
CLK1-203ENST00000409769 RGL4Q8IZJ4 473 aa8.54□□□□□ -1.04
CLK1-203ENST00000409769 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
CLK1-203ENST00000409769 SMG9Q9H0W8 520 aaKnown RBP8.54□□□□□ -1.04
CLK1-203ENST00000409769 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
CLK1-203ENST00000409769 SCO2A0A1W2PP80 73 aa8.53□□□□□ -1.04
CLK1-203ENST00000409769 PTCD1O75127 700 aaKnown RBP8.53□□□□□ -1.04
CLK1-203ENST00000409769 GHRHP01286 108 aa8.53□□□□□ -1.04
CLK1-203ENST00000409769 MAP4K3Q8IVH8 894 aa8.53□□□□□ -1.04
CLK1-203ENST00000409769 TP53INP1Q96A56 240 aa8.53□□□□□ -1.04
CLK1-203ENST00000409769 SSBP4Q9BWG4 385 aaPredicted RBP8.53□□□□□ -1.04
CLK1-203ENST00000409769 LOC102724428A0A0B4J2F2 783 aa8.52□□□□□ -1.05
CLK1-203ENST00000409769 ARID3CA6NKF2 412 aa8.52□□□□□ -1.05
CLK1-203ENST00000409769 SIK1P57059 783 aa8.52□□□□□ -1.05
CLK1-203ENST00000409769 MLLT1Q03111 559 aaPredicted RBP8.52□□□□□ -1.05
CLK1-203ENST00000409769 OCLNQ16625 522 aa8.52□□□□□ -1.05
CLK1-203ENST00000409769 CDCA8Q53HL2 280 aa8.52□□□□□ -1.05
CLK1-203ENST00000409769 CCDC97Q96F63 343 aaPredicted RBP8.52□□□□□ -1.05
CLK1-203ENST00000409769 KCNMB2Q9Y691 235 aa8.52□□□□□ -1.05
CLK1-203ENST00000409769 NLRP13Q86W25 1043 aa8.51□□□□□ -1.05
CLK1-203ENST00000409769 WFDC12Q8WWY7 111 aa8.51□□□□□ -1.05
CLK1-203ENST00000409769 PLD4Q96BZ4 506 aa8.51□□□□□ -1.05
CLK1-203ENST00000409769 PRIMPOLQ96LW4 560 aa8.51□□□□□ -1.05
CLK1-203ENST00000409769 ZMIZ1Q9ULJ6 1067 aa8.51□□□□□ -1.05
CLK1-203ENST00000409769 PRMT3O60678 531 aa8.5□□□□□ -1.05
CLK1-203ENST00000409769 MMP20O60882 483 aa8.5□□□□□ -1.05
CLK1-203ENST00000409769 ATG7O95352 703 aa8.5□□□□□ -1.05
CLK1-203ENST00000409769 SRPK2P78362 688 aaKnown RBP8.5□□□□□ -1.05
CLK1-203ENST00000409769 ARTNQ5T4W7 220 aa8.5□□□□□ -1.05
CLK1-203ENST00000409769 PIK3R5Q8WYR1 880 aa8.5□□□□□ -1.05
CLK1-203ENST00000409769 MUC3BQ9H195 1237 aa8.5□□□□□ -1.05
CLK1-203ENST00000409769 ZFP64Q9NPA5 681 aa8.5□□□□□ -1.05
CLK1-203ENST00000409769 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
CLK1-203ENST00000409769 HFE2Q6ZVN8 426 aa8.49□□□□□ -1.05
CLK1-203ENST00000409769 CXXC1Q9P0U4 656 aaPredicted RBP8.49□□□□□ -1.05
CLK1-203ENST00000409769 FNDC3AQ9Y2H6 1198 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms