RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TMEM67Q5HYA8 995 aa19.53■□□□□ 0.72
PCDHA13-202ENST00000409494 MPHOSPH6Q99547 160 aaKnown RBP19.53■□□□□ 0.72
PCDHA13-202ENST00000409494 DNAI2Q9GZS0 605 aa19.53■□□□□ 0.72
PCDHA13-202ENST00000409494 USP21Q9UK80 565 aa19.53■□□□□ 0.72
PCDHA13-202ENST00000409494 IARSP41252 1262 aaKnown RBP19.53■□□□□ 0.72
PCDHA13-202ENST00000409494 ZSCAN30Q86W11 494 aa19.53■□□□□ 0.72
PCDHA13-202ENST00000409494 SNRKQ9NRH2 765 aa19.53■□□□□ 0.72
PCDHA13-202ENST00000409494 CTAGE5O15320 804 aa19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 CYP7A1P22680 504 aa19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 NAP1L1P55209 391 aaKnown RBP19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 ZNF771Q7L3S4 317 aaPredicted RBP19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 BMP15O95972 392 aa19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 CEP85Q6P2H3 762 aa19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 METP08581 1390 aa19.52■□□□□ 0.72
PCDHA13-202ENST00000409494 PDILTQ8N807 584 aa19.52■□□□□ 0.71
PCDHA13-202ENST00000409494 GNPATO15228 680 aa19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 BAG4O95429 457 aaKnown RBP19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 FEZ1Q99689 392 aa19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 ANKARQ7Z5J8 1434 aa19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 PDE8AO60658 829 aa19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 SMC5Q8IY18 1101 aa19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 TSPYL6Q8N831 410 aa19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 PPP1R12BO60237 982 aaPredicted RBP19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 PPFIBP1Q86W92 1011 aa19.51■□□□□ 0.71
PCDHA13-202ENST00000409494 CNBD1Q8NA66 436 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 SSFA2P28290 1259 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 JDP2Q8WYK2 163 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 MYO6Q9UM54 1294 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 CLASP1Q7Z460 1538 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 SERPINC1P01008 464 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 TSPOAP1O95153 1857 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 DENND2AQ9ULE3 1009 aa19.5■□□□□ 0.71
PCDHA13-202ENST00000409494 ACBD3Q9H3P7 528 aa19.49■□□□□ 0.71
PCDHA13-202ENST00000409494 PAG1Q9NWQ8 432 aa19.49■□□□□ 0.71
PCDHA13-202ENST00000409494 CALM1P0DP23 149 aa19.49■□□□□ 0.71
PCDHA13-202ENST00000409494 CALM2P0DP24 149 aa19.49■□□□□ 0.71
PCDHA13-202ENST00000409494 CALM3P0DP25 149 aa19.49■□□□□ 0.71
PCDHA13-202ENST00000409494 NLRP5P59047 1200 aa19.49■□□□□ 0.71
PCDHA13-202ENST00000409494 CDR1P51861 262 aa19.49■□□□□ 0.71
PCDHA13-202ENST00000409494 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
PCDHA13-202ENST00000409494 FGFR1OPO95684 399 aaKnown RBP19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 SDSP20132 328 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 TTLL12Q14166 644 aaPredicted RBP19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 ZHX3Q9H4I2 956 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 ARGLU1Q9NWB6 273 aaPredicted RBP19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 AOX1Q06278 1338 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 PPP4R3AQ6IN85 833 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 MNS1Q8NEH6 495 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 SYNMO15061 1565 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 SYCE3A1L190 88 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 EYA2O00167 538 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 CARD10Q9BWT7 1032 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 LRRC27Q9C0I9 530 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 KDM6BO15054 1643 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 NBPF7P0C2Y1 421 aaPredicted RBP19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 TRIM21P19474 475 aaKnown RBP19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 MAP3K11Q16584 847 aa19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 ZSCAN16Q9H4T2 348 aaPredicted RBP19.48■□□□□ 0.71
PCDHA13-202ENST00000409494 WTAPQ15007 396 aa19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 ZNF219Q9P2Y4 722 aaPredicted RBP19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 KAT6BQ8WYB5 2073 aa19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 ZMYM4Q5VZL5 1548 aa19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 SSBP05455 408 aaKnown RBP eCLIP19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 CCDC148Q8NFR7 591 aa19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 METAP2P50579 478 aaKnown RBP eCLIP19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 SLC9C2Q5TAH2 1124 aa19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 SPC24Q8NBT2 197 aa19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 ESYT1Q9BSJ8 1104 aa19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 MAST3O60307 1309 aa19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 RNF113AO15541 343 aaKnown RBP19.47■□□□□ 0.71
PCDHA13-202ENST00000409494 IQGAP3Q86VI3 1631 aa19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 RBM10P98175 930 aaKnown RBP19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 SUPT20HQ8NEM7 779 aa19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 TRIM35Q9UPQ4 493 aa19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 SLC4A4Q9Y6R1 1079 aa19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 PRDM15P57071 1507 aaPredicted RBP19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 NF2P35240 595 aa19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 PRIM1P49642 420 aaKnown RBP19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 PRM3Q9NNZ6 103 aa19.46■□□□□ 0.71
PCDHA13-202ENST00000409494 BAG6P46379 1132 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 NSFL1CQ9UNZ2 370 aaKnown RBP19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 ERCC6L2Q5T890 1561 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 EIF4A1P60842 406 aaKnown RBP19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 ARHGEF25Q86VW2 580 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 TRPC5Q9UL62 973 aaPredicted RBP19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 AMPD3Q01432 767 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 MPNDQ8N594 471 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 ORC3Q9UBD5 711 aaPredicted RBP19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 USP6P35125 1406 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 MAGEB6P1A0A0J9YX57 407 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 PHKG2P15735 406 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 PDE4CQ08493 712 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 KANK3Q6NY19 840 aa19.45■□□□□ 0.7
PCDHA13-202ENST00000409494 B4DLN1 442 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms