RNA–Protein interactions for RNA: ENST00000409284.1

CCDC141-202, Transcript of coiled-coil domain containing 141, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC141, Length 6,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-202ENST00000409284 ZNF165P49910 485 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 ZSCAN23Q3MJ62 389 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 INTS8Q75QN2 995 aaKnown RBP4.09□□□□□ -1.75
CCDC141-202ENST00000409284 LCA5Q86VQ0 697 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 AFAP1L1Q8TED9 768 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 TSNARE1Q96NA8 513 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 SEC62Q99442 399 aaKnown RBP4.09□□□□□ -1.75
CCDC141-202ENST00000409284 ZC4H2Q9NQZ6 224 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 PCDHB8Q9UN66 801 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 SUGT1Q9Y2Z0 365 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 PCDHB13Q9Y5F0 798 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 SMIM23A6NLE4 172 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 CTAGE5O15320 804 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 HCLS1P14317 486 aaPredicted RBP4.09□□□□□ -1.75
CCDC141-202ENST00000409284 GNAI1P63096 354 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 COG7P83436 770 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 KLHL40Q2TBA0 621 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 MAP7D1Q3KQU3 841 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 PRR16Q569H4 304 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 NPAS4Q8IUM7 802 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 RUNDC1Q96C34 613 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 TRIM7Q9C029 511 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.09□□□□□ -1.75
CCDC141-202ENST00000409284 FAF1Q9UNN5 650 aaPredicted RBP4.09□□□□□ -1.75
CCDC141-202ENST00000409284 USH1CQ9Y6N9 552 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 RAPGEF2Q9Y4G8 1499 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 TMEM88BA6NKF7 163 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 BIN1O00499 593 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 CETN3O15182 167 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 PRC1O43663 620 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 MYO1BO43795 1136 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 MAP4K4O95819 1239 aaPredicted RBP4.09□□□□□ -1.75
CCDC141-202ENST00000409284 RECKO95980 971 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 RLBP1P12271 317 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 STX1AQ16623 288 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 NAA16Q6N069 864 aaPredicted RBP4.09□□□□□ -1.75
CCDC141-202ENST00000409284 CCDC170Q8IYT3 715 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 CCDC77Q9BR77 488 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 RABEP2Q9H5N1 569 aa4.09□□□□□ -1.75
CCDC141-202ENST00000409284 DDX19AQ9NUU7 478 aaKnown RBP4.09□□□□□ -1.75
CCDC141-202ENST00000409284 CCDC172P0C7W6 258 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 ARHGAP25P42331 645 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 NOP2P46087 812 aaKnown RBP4.09□□□□□ -1.76
CCDC141-202ENST00000409284 SH3BGRP55822 239 aaPredicted RBP4.09□□□□□ -1.76
CCDC141-202ENST00000409284 HDXQ7Z353 690 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 CNPY4Q8N129 248 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 GSDMBQ8TAX9 411 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 TACO1Q9BSH4 297 aaKnown RBP4.09□□□□□ -1.76
CCDC141-202ENST00000409284 GPHNQ9NQX3 736 aaPredicted RBP4.09□□□□□ -1.76
CCDC141-202ENST00000409284 BAIAP2L1Q9UHR4 511 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 ANKRD33BA6NCL7 494 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 CDKL5O76039 1030 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 RHOXF2BP0C7M4 288 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 VPS41P49754 854 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 MVPQ14764 893 aaKnown RBP4.09□□□□□ -1.76
CCDC141-202ENST00000409284 C1orf141Q5JVX7 400 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 LRSAM1Q6UWE0 723 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 SMC5Q8IY18 1101 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 RHOXF2Q9BQY4 288 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 XAB2Q9HCS7 855 aaKnown RBP4.09□□□□□ -1.76
CCDC141-202ENST00000409284 MRFAP1Q9Y605 127 aa4.09□□□□□ -1.76
CCDC141-202ENST00000409284 CCDC69A6NI79 296 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 TUBB4AP04350 444 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 TTC5Q8N0Z6 440 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 CTCFLQ8NI51 663 aaPredicted RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 ABTB1Q969K4 478 aaPredicted RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 UBAC1Q9BSL1 405 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 UBA5Q9GZZ9 404 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 RUSC2Q8N2Y8 1516 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 AKNAQ7Z591 1439 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 TLDC2A0PJX2 215 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 BICDL2A1A5D9 508 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 TXNDC9O14530 226 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 RAB11FIP4Q86YS3 637 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 RRAGDQ9NQL2 400 aaPredicted RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 PUF60Q9UHX1 559 aaKnown RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 DIAPH1O60610 1272 aaKnown RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 GNAI3P08754 354 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 FECHP22830 423 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 AIMP1Q12904 312 aaKnown RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 SF3B2Q13435 895 aaKnown RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 PDE3AQ14432 1141 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 LRRC23Q53EV4 343 aaPredicted RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 SEPT8Q92599 483 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 DDX12PQ92771 950 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 MGEA5O60502 916 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 TRIM68Q6AZZ1 485 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 TSG101Q99816 390 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 SIL1Q9H173 461 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 VEZTQ9HBM0 779 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 KCNK9Q9NPC2 374 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 EMILIN3Q9NT22 766 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 CTAGE9A4FU28 777 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 SMIM24O75264 130 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 BAG4O95429 457 aaKnown RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 VIMP08670 466 aaKnown RBP4.08□□□□□ -1.76
CCDC141-202ENST00000409284 SOX11P35716 441 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 ISM2Q6H9L7 571 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 CCDC63Q8NA47 563 aa4.08□□□□□ -1.76
CCDC141-202ENST00000409284 CXorf38Q8TB03 319 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms