RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 TRAK1Q9UPV9 953 aa9.82□□□□□ -0.84
CEACAM1-208ENST00000403461 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
CEACAM1-208ENST00000403461 EMILIN1Q9Y6C2 1016 aa9.82□□□□□ -0.84
CEACAM1-208ENST00000403461 DISP2A7MBM2 1401 aa9.82□□□□□ -0.84
CEACAM1-208ENST00000403461 PARD3Q8TEW0 1356 aa9.81□□□□□ -0.84
CEACAM1-208ENST00000403461 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
CEACAM1-208ENST00000403461 WASLO00401 505 aaPredicted RBP9.81□□□□□ -0.84
CEACAM1-208ENST00000403461 NFX1Q12986 1120 aaKnown RBP9.81□□□□□ -0.84
CEACAM1-208ENST00000403461 PDE3BQ13370 1112 aa9.81□□□□□ -0.84
CEACAM1-208ENST00000403461 NBPF8Q3BBV2 869 aa9.81□□□□□ -0.84
CEACAM1-208ENST00000403461 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
CEACAM1-208ENST00000403461 NWD2Q9ULI1 1742 aa9.81□□□□□ -0.84
CEACAM1-208ENST00000403461 APBA3O96018 575 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 LMOD1P29536 600 aaPredicted RBP9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 EVA1CP58658 441 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 FAM182BQ5T319 152 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 ARID3AQ99856 593 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 CDCA7Q9BWT1 371 aaPredicted RBP9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 KLF16Q9BXK1 252 aaPredicted RBP9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 STRN4Q9NRL3 753 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 PGPEP1Q9NXJ5 209 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 SPATA31A1Q5TZJ5 1347 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 ADGRB2O60241 1585 aa9.8□□□□□ -0.84
CEACAM1-208ENST00000403461 TULP4Q9NRJ4 1543 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 USP17L3A6NCW0 530 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 USP17L4A6NCW7 530 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 TRIM37O94972 964 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 USP4Q13107 963 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 EZH2Q15910 746 aaKnown RBP9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 USP17L2Q6R6M4 530 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 USP17L1Q7RTZ2 530 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 TMPRSS4Q9NRS4 437 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 PLCH1Q4KWH8 1693 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 PRR36Q9H6K5 1346 aa9.79□□□□□ -0.84
CEACAM1-208ENST00000403461 KIAA0232Q92628 1395 aa9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 NCOA4Q13772 614 aa9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 EML3Q32P44 896 aa9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 OXLD1Q5BKU9 147 aa9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 DEPDC4Q8N2C3 294 aa9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 ZNF784Q8NCA9 323 aaPredicted RBP9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 DCAF11Q8TEB1 546 aa9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 USP35Q9P2H5 1018 aa9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 COL14A1Q05707 1796 aaKnown RBP9.78□□□□□ -0.84
CEACAM1-208ENST00000403461 WDR4P57081 412 aaKnown RBP9.77□□□□□ -0.85
CEACAM1-208ENST00000403461 ERVK-9P63128 1117 aa9.77□□□□□ -0.85
CEACAM1-208ENST00000403461 CHRNA2Q15822 529 aa9.77□□□□□ -0.85
CEACAM1-208ENST00000403461 KIFC2Q96AC6 838 aa9.77□□□□□ -0.85
CEACAM1-208ENST00000403461 NUDT16Q96DE0 195 aaKnown RBP9.77□□□□□ -0.85
CEACAM1-208ENST00000403461 CAMKK2Q96RR4 588 aa9.77□□□□□ -0.85
CEACAM1-208ENST00000403461 PPP1R1BQ9UD71 204 aaPredicted RBP9.77□□□□□ -0.85
CEACAM1-208ENST00000403461 ATP7BP35670 1465 aa9.77□□□□□ -0.85
CEACAM1-208ENST00000403461 IFT172Q9UG01 1749 aa9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 LILRA1O75019 489 aa9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 ZIC2O95409 532 aaPredicted RBP9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 MYCP01106 439 aaPredicted RBP9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 TIMP2P16035 220 aa9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 RFX1P22670 979 aa9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 ZC3H6P61129 1189 aaKnown RBP9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 CC2D2BQ6DHV5 1058 aa9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 TCP11L2Q8N4U5 519 aa9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 ITPKCQ96DU7 683 aa9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 CYLDQ9NQC7 956 aa9.76□□□□□ -0.85
CEACAM1-208ENST00000403461 ADGRB1O14514 1584 aa9.75□□□□□ -0.85
CEACAM1-208ENST00000403461 TERTO14746 1132 aaKnown RBP9.75□□□□□ -0.85
CEACAM1-208ENST00000403461 YY1P25490 414 aa9.75□□□□□ -0.85
CEACAM1-208ENST00000403461 SCTRP47872 440 aa9.75□□□□□ -0.85
CEACAM1-208ENST00000403461 NUTM2GQ5VZR2 741 aa9.75□□□□□ -0.85
CEACAM1-208ENST00000403461 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
CEACAM1-208ENST00000403461 THRAP3Q9Y2W1 955 aaKnown RBP9.75□□□□□ -0.85
CEACAM1-208ENST00000403461 ABCA3Q99758 1704 aa9.74□□□□□ -0.85
CEACAM1-208ENST00000403461 INSM1Q01101 510 aaPredicted RBP9.74□□□□□ -0.85
CEACAM1-208ENST00000403461 ABTB2Q8N961 1025 aa9.74□□□□□ -0.85
CEACAM1-208ENST00000403461 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
CEACAM1-208ENST00000403461 VRTNQ9H8Y1 702 aa9.74□□□□□ -0.85
CEACAM1-208ENST00000403461 SPON1Q9HCB6 807 aa9.74□□□□□ -0.85
CEACAM1-208ENST00000403461 MKRN1Q9UHC7 482 aaKnown RBP9.74□□□□□ -0.85
CEACAM1-208ENST00000403461 BRWD3Q6RI45 1802 aa9.74□□□□□ -0.85
CEACAM1-208ENST00000403461 SSH2Q76I76 1423 aa9.73□□□□□ -0.85
CEACAM1-208ENST00000403461 RGPD1P0DJD0 1748 aa9.73□□□□□ -0.85
CEACAM1-208ENST00000403461 NRAPQ86VF7 1730 aa9.73□□□□□ -0.85
CEACAM1-208ENST00000403461 ADD1P35611 737 aaKnown RBP9.73□□□□□ -0.85
CEACAM1-208ENST00000403461 CDK19Q9BWU1 502 aa9.73□□□□□ -0.85
CEACAM1-208ENST00000403461 ACEP12821 1306 aa9.73□□□□□ -0.85
CEACAM1-208ENST00000403461 THSD7AQ9UPZ6 1657 aa9.73□□□□□ -0.85
CEACAM1-208ENST00000403461 ATP5J2-PTCD1G3V325 749 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 WIPF1O43516 503 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 Q6ZVU0 165 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 NLRP13Q86W25 1043 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 TRIM50Q86XT4 487 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 PBXIP1Q96AQ6 731 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 STK17AQ9UEE5 414 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 TRPM3Q9HCF6 1732 aaPredicted RBP9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 POLR3AO14802 1390 aaPredicted RBP9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 CPDO75976 1380 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 RAB3GAP2Q9H2M9 1393 aa9.72□□□□□ -0.85
CEACAM1-208ENST00000403461 CAPN5O15484 640 aaPredicted RBP9.71□□□□□ -0.86
CEACAM1-208ENST00000403461 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms