RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 DACT1Q9NYF0 836 aa20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 TOB2Q14106 344 aaPredicted RBP20.24■□□□□ 0.83
SNRNP70-202ENST00000401730 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
SNRNP70-202ENST00000401730 ZSCAN31Q96LW9 406 aaPredicted RBP20.24■□□□□ 0.83
SNRNP70-202ENST00000401730 LRRC37A3O60309 1634 aa20.24■□□□□ 0.83
SNRNP70-202ENST00000401730 KDM4AO75164 1064 aa20.24■□□□□ 0.83
SNRNP70-202ENST00000401730 FTOQ9C0B1 505 aaKnown RBP eCLIP20.24■□□□□ 0.839e-16■□□□□ 8.5
SNRNP70-202ENST00000401730 ZBTB3Q9H5J0 574 aa20.24■□□□□ 0.83
SNRNP70-202ENST00000401730 SH2B1Q9NRF2 756 aaPredicted RBP20.24■□□□□ 0.83
SNRNP70-202ENST00000401730 RNF20Q5VTR2 975 aa20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 BRF1Q92994 677 aa20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 ERBB3P21860 1342 aa20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 USP42Q9H9J4 1324 aaKnown RBP20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 GOLIM4O00461 696 aa20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 PSMA5P28066 241 aa20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 KRT85P78386 507 aa20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
SNRNP70-202ENST00000401730 RPS6KB1P23443 525 aa20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 Q6ZUG5 572 aa20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 SPATA32Q96LK8 384 aa20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 SNRKQ9NRH2 765 aa20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 NPHP3Q7Z494 1330 aa20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 TAF5LO75529 589 aa20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 PTPN12Q05209 780 aaKnown RBP20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 TNNI3KQ59H18 835 aa20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 ERCC4Q92889 916 aaPredicted RBP20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 METTL22Q9BUU2 404 aaPredicted RBP20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 FPGT-TNNI3KV9GXZ4 949 aa20.22■□□□□ 0.83
SNRNP70-202ENST00000401730 H3BQV1 296 aa20.21■□□□□ 0.83
SNRNP70-202ENST00000401730 PHKG2P15735 406 aa20.21■□□□□ 0.83
SNRNP70-202ENST00000401730 IFFO2Q5TF58 517 aa20.21■□□□□ 0.83
SNRNP70-202ENST00000401730 DRC7Q8IY82 874 aa20.21■□□□□ 0.83
SNRNP70-202ENST00000401730 CABP4P57796 275 aa20.21■□□□□ 0.83
SNRNP70-202ENST00000401730 NCOA5Q9HCD5 579 aaKnown RBP20.21■□□□□ 0.83
SNRNP70-202ENST00000401730 CYP27B1O15528 508 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 IL17RAQ96F46 866 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 TTLL7Q6ZT98 887 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 TMEM87AQ8NBN3 555 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 COL15A1P39059 1388 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 MARF1Q9Y4F3 1742 aaKnown RBP20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 A1BGP04217 495 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 TM6SF1Q9BZW5 370 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 NUP62CLQ9H1M0 184 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 TUBGCP6Q96RT7 1819 aa20.2■□□□□ 0.82
SNRNP70-202ENST00000401730 NFAT5O94916 1531 aa20.19■□□□□ 0.82
SNRNP70-202ENST00000401730 NOLC1Q14978 699 aaKnown RBP eCLIP20.19■□□□□ 0.82
SNRNP70-202ENST00000401730 NEK1Q96PY6 1258 aa20.19■□□□□ 0.82
SNRNP70-202ENST00000401730 CYP21A2P08686 494 aa20.19■□□□□ 0.82
SNRNP70-202ENST00000401730 TNMDQ9H2S6 317 aa20.19■□□□□ 0.82
SNRNP70-202ENST00000401730 PODXL2Q9NZ53 605 aa20.19■□□□□ 0.82
SNRNP70-202ENST00000401730 CACNA1FO60840 1977 aa20.19■□□□□ 0.82
SNRNP70-202ENST00000401730 PYCARDQ9ULZ3 195 aa20.18■□□□□ 0.82
SNRNP70-202ENST00000401730 FAM184AQ8NB25 1140 aa20.18■□□□□ 0.82
SNRNP70-202ENST00000401730 HIP1O00291 1037 aa20.18■□□□□ 0.82
SNRNP70-202ENST00000401730 NR1I2O75469 434 aa20.18■□□□□ 0.82
SNRNP70-202ENST00000401730 SNRPA1P09661 255 aaKnown RBP20.18■□□□□ 0.82
SNRNP70-202ENST00000401730 HAND2P61296 217 aa20.18■□□□□ 0.82
SNRNP70-202ENST00000401730 APOBRQ0VD83 1088 aa20.18■□□□□ 0.82
SNRNP70-202ENST00000401730 EPB41L2O43491 1005 aaKnown RBP20.17■□□□□ 0.82
SNRNP70-202ENST00000401730 CCDC192P0DO97 292 aa20.17■□□□□ 0.82
SNRNP70-202ENST00000401730 ANO6Q4KMQ2 910 aa20.17■□□□□ 0.82
SNRNP70-202ENST00000401730 IFNL2Q8IZJ0 200 aa20.17■□□□□ 0.82
SNRNP70-202ENST00000401730 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.823e-10■□□□□ 9.7
SNRNP70-202ENST00000401730 CSPP1Q1MSJ5 1256 aa20.17■□□□□ 0.82
SNRNP70-202ENST00000401730 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
SNRNP70-202ENST00000401730 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
SNRNP70-202ENST00000401730 MAP3K11Q16584 847 aa20.16■□□□□ 0.82
SNRNP70-202ENST00000401730 TTLL5Q6EMB2 1281 aa20.16■□□□□ 0.82
SNRNP70-202ENST00000401730 NRBP1Q9UHY1 535 aa20.16■□□□□ 0.82
SNRNP70-202ENST00000401730 TYRO3Q06418 890 aa20.16■□□□□ 0.82
SNRNP70-202ENST00000401730 PTGS1P23219 599 aa20.16■□□□□ 0.82
SNRNP70-202ENST00000401730 STOX1Q6ZVD7 989 aa20.16■□□□□ 0.82
SNRNP70-202ENST00000401730 PUS3Q9BZE2 481 aaKnown RBP20.16■□□□□ 0.82
SNRNP70-202ENST00000401730 DNAJC25Q9H1X3 360 aa20.16■□□□□ 0.82
SNRNP70-202ENST00000401730 FER1L4A9Z1Z3 1794 aa20.15■□□□□ 0.82
SNRNP70-202ENST00000401730 OTUD7BQ6GQQ9 843 aa20.15■□□□□ 0.82
SNRNP70-202ENST00000401730 LRMPQ12912 555 aa20.15■□□□□ 0.82
SNRNP70-202ENST00000401730 LEO1Q8WVC0 666 aaPredicted RBP20.15■□□□□ 0.82
SNRNP70-202ENST00000401730 FUCA2Q9BTY2 467 aa20.15■□□□□ 0.82
SNRNP70-202ENST00000401730 ADGRL3Q9HAR2 1447 aa20.14■□□□□ 0.82
SNRNP70-202ENST00000401730 FMNL2Q96PY5 1086 aa20.14■□□□□ 0.82
SNRNP70-202ENST00000401730 PRDM4Q9UKN5 801 aa20.14■□□□□ 0.82
SNRNP70-202ENST00000401730 LETM1O95202 739 aaPredicted RBP20.14■□□□□ 0.81
SNRNP70-202ENST00000401730 ATF3P18847 181 aa20.14■□□□□ 0.81
SNRNP70-202ENST00000401730 RFX5P48382 616 aaPredicted RBP20.14■□□□□ 0.81
SNRNP70-202ENST00000401730 SASS6Q6UVJ0 657 aa20.14■□□□□ 0.81
SNRNP70-202ENST00000401730 PGBD1Q96JS3 809 aa20.14■□□□□ 0.81
SNRNP70-202ENST00000401730 NPHP4O75161 1426 aaPredicted RBP20.14■□□□□ 0.81
SNRNP70-202ENST00000401730 MAP7D2Q96T17 732 aa20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 TRIM5Q9C035 493 aa20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 MRVI1Q9Y6F6 885 aa20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 KDM6AO15550 1401 aaPredicted RBP20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 HEG1Q9ULI3 1381 aa20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 SCRN1Q12765 414 aa20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 UVSSAQ2YD98 709 aa20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 PDCP20941 246 aa20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 CBX1P83916 185 aa20.13■□□□□ 0.81
SNRNP70-202ENST00000401730 KCNB2Q92953 911 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms