RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 USHBP1Q8N6Y0 703 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 VAT1LQ9HCJ6 419 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 KLF18A0A0U1RQI7 1052 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 TACC1O75410 805 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 KRBA2Q6ZNG9 492 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 FEZ1Q99689 392 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 HMG20BQ9P0W2 317 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 CPLX4Q7Z7G2 160 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 DZIP1Q86YF9 867 aaKnown RBP18.4■□□□□ 0.54
ITSN1-209ENST00000399352 SMIM23A6NLE4 172 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 KCNG4Q8TDN1 519 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 COMMD10Q9Y6G5 202 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 GUCA1BQ9UMX6 200 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 CEP83Q9Y592 693 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 EMILIN1Q9Y6C2 1016 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 NCOA7Q8NI08 942 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 PTPRCP08575 1304 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 RAB3GAP1Q15042 981 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 DAAM2Q86T65 1068 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.53
ITSN1-209ENST00000399352 ZC3H6P61129 1189 aaKnown RBP18.39■□□□□ 0.53
ITSN1-209ENST00000399352 NAA25Q14CX7 972 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 ZNF569Q5MCW4 686 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 PSMD1Q99460 953 aa18.39■□□□□ 0.53
ITSN1-209ENST00000399352 PYM1Q9BRP8 204 aaKnown RBP18.39■□□□□ 0.53
ITSN1-209ENST00000399352 IQCGQ9H095 443 aaKnown RBP18.39■□□□□ 0.53
ITSN1-209ENST00000399352 CHMP4BP1P59074 171 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 SNX21Q969T3 373 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 PPP4R3AQ6IN85 833 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 CCDC129Q6ZRS4 1044 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 RMND1Q9NWS8 449 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 ZBTB16Q05516 673 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 TUBB4AP04350 444 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 KRT13P13646 458 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 FERP16591 822 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 ACTN2P35609 894 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 IFT81Q8WYA0 676 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
ITSN1-209ENST00000399352 SELENOOQ9BVL4 669 aa18.38■□□□□ 0.53
ITSN1-209ENST00000399352 HDAC1Q13547 482 aaPredicted RBP18.37■□□□□ 0.53
ITSN1-209ENST00000399352 SYCP3Q8IZU3 236 aa18.37■□□□□ 0.53
ITSN1-209ENST00000399352 IFNKQ9P0W0 207 aa18.37■□□□□ 0.53
ITSN1-209ENST00000399352 ZGPATQ8N5A5 531 aaKnown RBP18.37■□□□□ 0.53
ITSN1-209ENST00000399352 ALG1Q9BT22 464 aa18.37■□□□□ 0.53
ITSN1-209ENST00000399352 TLDC2A0PJX2 215 aa18.37■□□□□ 0.53
ITSN1-209ENST00000399352 ESYT1Q9BSJ8 1104 aa18.37■□□□□ 0.53
ITSN1-209ENST00000399352 STARD3NLO95772 234 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 ARID5AQ03989 594 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 SPAG1Q07617 926 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 APBB1IPQ7Z5R6 666 aaPredicted RBP18.36■□□□□ 0.53
ITSN1-209ENST00000399352 PRDM11Q9NQV5 511 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 KIF5AQ12840 1032 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 GRIPAP1Q4V328 841 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 CUL5Q93034 780 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 TERF1P54274 439 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 FERMT2Q96AC1 680 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 SLC5A1P13866 664 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
ITSN1-209ENST00000399352 RGS22Q8NE09 1264 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 FAM76AQ8TAV0 307 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 KRT86O43790 486 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 MPRIPQ6WCQ1 1025 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 NME9Q86XW9 330 aa18.36■□□□□ 0.53
ITSN1-209ENST00000399352 RBM8AQ9Y5S9 174 aaKnown RBP18.36■□□□□ 0.53
ITSN1-209ENST00000399352 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 SLC4A8Q2Y0W8 1093 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 A0A1B0GUL7 405 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 STAT6P42226 847 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 RASAL2Q9UJF2 1139 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 EVCP57679 992 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 SMC6Q96SB8 1091 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 CCDC61Q9Y6R9 512 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 STX17P56962 302 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 RHPN1Q8TCX5 695 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 RSRC1Q96IZ7 334 aaKnown RBP18.35■□□□□ 0.53
ITSN1-209ENST00000399352 TSNARE1Q96NA8 513 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 CCDC77Q9BR77 488 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 UTP14AQ9BVJ6 771 aaKnown RBP18.35■□□□□ 0.53
ITSN1-209ENST00000399352 MAP3K2Q9Y2U5 619 aa18.35■□□□□ 0.53
ITSN1-209ENST00000399352 PDE1AP54750 535 aa18.34■□□□□ 0.53
ITSN1-209ENST00000399352 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
ITSN1-209ENST00000399352 DBF4Q9UBU7 674 aaPredicted RBP18.34■□□□□ 0.53
ITSN1-209ENST00000399352 PPP2R3AQ06190 1150 aa18.34■□□□□ 0.53
ITSN1-209ENST00000399352 KRT83P78385 493 aa18.34■□□□□ 0.53
ITSN1-209ENST00000399352 PLVAPQ9BX97 442 aa18.34■□□□□ 0.53
ITSN1-209ENST00000399352 TMOD2Q9NZR1 351 aa18.34■□□□□ 0.53
ITSN1-209ENST00000399352 KIF5BP33176 963 aa18.34■□□□□ 0.53
ITSN1-209ENST00000399352 TSPY2A6NKD2 308 aa18.33■□□□□ 0.53
ITSN1-209ENST00000399352 HDXQ7Z353 690 aa18.33■□□□□ 0.53
ITSN1-209ENST00000399352 C16orf71Q8IYS4 520 aaPredicted RBP18.33■□□□□ 0.53
ITSN1-209ENST00000399352 FAM83GA6ND36 823 aa18.33■□□□□ 0.53
ITSN1-209ENST00000399352 FAM160A1Q05DH4 1040 aa18.33■□□□□ 0.53
ITSN1-209ENST00000399352 Q6ZUG5 572 aa18.33■□□□□ 0.53
ITSN1-209ENST00000399352 DHX58Q96C10 678 aa18.33■□□□□ 0.53
ITSN1-209ENST00000399352 CCDC42Q96M95 316 aa18.33■□□□□ 0.53
ITSN1-209ENST00000399352 SMC5Q8IY18 1101 aa18.33■□□□□ 0.52
ITSN1-209ENST00000399352 TTC14Q96N46 770 aa18.33■□□□□ 0.52
ITSN1-209ENST00000399352 MEIS3Q99687 375 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms