RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 CCDC146Q8IYE0 955 aa15.46■□□□□ 0.07
SMIM11A-201ENST00000399292 C10orf71Q711Q0 1435 aa15.45■□□□□ 0.06
SMIM11A-201ENST00000399292 SERPINB2P05120 415 aa15.45■□□□□ 0.06
SMIM11A-201ENST00000399292 BCAMP50895 628 aa15.45■□□□□ 0.06
SMIM11A-201ENST00000399292 BICDL1Q6ZP65 573 aa15.45■□□□□ 0.06
SMIM11A-201ENST00000399292 ZNF784Q8NCA9 323 aaPredicted RBP15.45■□□□□ 0.06
SMIM11A-201ENST00000399292 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
SMIM11A-201ENST00000399292 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
SMIM11A-201ENST00000399292 PIP4K2AP48426 406 aaPredicted RBP15.44■□□□□ 0.06
SMIM11A-201ENST00000399292 EIF4A1P60842 406 aaKnown RBP15.44■□□□□ 0.06
SMIM11A-201ENST00000399292 DZIP3Q86Y13 1208 aaKnown RBP15.44■□□□□ 0.06
SMIM11A-201ENST00000399292 BCS1LQ9Y276 419 aa15.44■□□□□ 0.06
SMIM11A-201ENST00000399292 RRP7AQ9Y3A4 280 aaKnown RBP15.44■□□□□ 0.06
SMIM11A-201ENST00000399292 PXDNLA1KZ92 1463 aa15.44■□□□□ 0.06
SMIM11A-201ENST00000399292 KCNA3P22001 575 aa15.43■□□□□ 0.06
SMIM11A-201ENST00000399292 TBC1D9BQ66K14 1250 aa15.43■□□□□ 0.06
SMIM11A-201ENST00000399292 BABAM1Q9NWV8 329 aa15.43■□□□□ 0.06
SMIM11A-201ENST00000399292 PIM2Q9P1W9 311 aa15.43■□□□□ 0.06
SMIM11A-201ENST00000399292 TSPYL4Q9UJ04 414 aa15.43■□□□□ 0.06
SMIM11A-201ENST00000399292 NBPF26B4DH59 902 aa15.42■□□□□ 0.06
SMIM11A-201ENST00000399292 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
SMIM11A-201ENST00000399292 NBPF10Q6P3W6 841 aaKnown RBP15.42■□□□□ 0.06
SMIM11A-201ENST00000399292 NBPF15Q8N660 670 aa15.42■□□□□ 0.06
SMIM11A-201ENST00000399292 SETDB2Q96T68 719 aa15.42■□□□□ 0.06
SMIM11A-201ENST00000399292 TSKSQ9UJT2 592 aa15.41■□□□□ 0.06
SMIM11A-201ENST00000399292 CHRNA5P30532 468 aa15.4■□□□□ 0.06
SMIM11A-201ENST00000399292 DALRD3Q5D0E6 543 aaKnown RBP15.4■□□□□ 0.06
SMIM11A-201ENST00000399292 CLEC4GQ6UXB4 293 aa15.4■□□□□ 0.06
SMIM11A-201ENST00000399292 PACS2Q86VP3 889 aa15.4■□□□□ 0.06
SMIM11A-201ENST00000399292 ZNF652Q9Y2D9 606 aa15.4■□□□□ 0.06
SMIM11A-201ENST00000399292 GRXCR2A6NFK2 248 aa15.39■□□□□ 0.05
SMIM11A-201ENST00000399292 ARHGAP27Q6ZUM4 889 aa15.39■□□□□ 0.05
SMIM11A-201ENST00000399292 H0YIN7 160 aa15.38■□□□□ 0.05
SMIM11A-201ENST00000399292 NPHP1O15259 732 aa15.38■□□□□ 0.05
SMIM11A-201ENST00000399292 NYAP1Q6ZVC0 841 aa15.38■□□□□ 0.05
SMIM11A-201ENST00000399292 NGEFQ8N5V2 710 aa15.38■□□□□ 0.05
SMIM11A-201ENST00000399292 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
SMIM11A-201ENST00000399292 CHD4Q14839 1912 aa15.38■□□□□ 0.05
SMIM11A-201ENST00000399292 KIF13BQ9NQT8 1826 aa15.38■□□□□ 0.05
SMIM11A-201ENST00000399292 CARMIL3Q8ND23 1372 aa15.37■□□□□ 0.05
SMIM11A-201ENST00000399292 DLG5Q8TDM6 1919 aa15.37■□□□□ 0.05
SMIM11A-201ENST00000399292 CHL1O00533 1208 aa15.37■□□□□ 0.05
SMIM11A-201ENST00000399292 ANP32CO43423 234 aa15.37■□□□□ 0.05
SMIM11A-201ENST00000399292 BRIP1Q9BX63 1249 aa15.37■□□□□ 0.05
SMIM11A-201ENST00000399292 APAF1O14727 1248 aa15.36■□□□□ 0.05
SMIM11A-201ENST00000399292 MYL6BP14649 208 aa15.36■□□□□ 0.05
SMIM11A-201ENST00000399292 EIF2S2P20042 333 aaKnown RBP15.36■□□□□ 0.05
SMIM11A-201ENST00000399292 PDE6BP35913 854 aa15.36■□□□□ 0.05
SMIM11A-201ENST00000399292 PRR5LQ6MZQ0 368 aa15.36■□□□□ 0.05
SMIM11A-201ENST00000399292 C2CD5Q86YS7 1000 aa15.36■□□□□ 0.05
SMIM11A-201ENST00000399292 PDZRN3Q9UPQ7 1066 aa15.36■□□□□ 0.05
SMIM11A-201ENST00000399292 RGS20O76081 388 aa15.35■□□□□ 0.05
SMIM11A-201ENST00000399292 ITGBL1O95965 494 aaPredicted RBP15.35■□□□□ 0.05
SMIM11A-201ENST00000399292 NBPF5PQ86XG9 351 aaPredicted RBP15.35■□□□□ 0.05
SMIM11A-201ENST00000399292 CCDC24Q8N4L8 307 aa15.35■□□□□ 0.05
SMIM11A-201ENST00000399292 CNBD1Q8NA66 436 aa15.35■□□□□ 0.05
SMIM11A-201ENST00000399292 CDCA7LQ96GN5 454 aa15.35■□□□□ 0.05
SMIM11A-201ENST00000399292 WBP1LQ9NX94 342 aa15.35■□□□□ 0.05
SMIM11A-201ENST00000399292 N4BP2Q86UW6 1770 aaPredicted RBP15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 ERVV-1B6SEH8 477 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 PRSS12P56730 875 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 ST5P78524 1137 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 HLFQ16534 295 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 CCDC184Q52MB2 194 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 TPTE2Q6XPS3 522 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 KIF6Q6ZMV9 814 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 NIP7Q9Y221 180 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 ERBB4Q15303 1308 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 CEP350Q5VT06 3117 aa15.34■□□□□ 0.05
SMIM11A-201ENST00000399292 OSBPP22059 807 aa15.33■□□□□ 0.04
SMIM11A-201ENST00000399292 TTLL7Q6ZT98 887 aa15.33■□□□□ 0.04
SMIM11A-201ENST00000399292 ZNF622Q969S3 477 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMIM11A-201ENST00000399292 LRCH3Q96II8 777 aa15.33■□□□□ 0.04
SMIM11A-201ENST00000399292 KIAA1551Q9HCM1 1747 aa15.33■□□□□ 0.04
SMIM11A-201ENST00000399292 KDM3BQ7LBC6 1761 aa15.32■□□□□ 0.04
SMIM11A-201ENST00000399292 C1QTNF8P60827 252 aa15.32■□□□□ 0.04
SMIM11A-201ENST00000399292 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
SMIM11A-201ENST00000399292 MAP3K15Q6ZN16 1313 aa15.32■□□□□ 0.04
SMIM11A-201ENST00000399292 FAM177BA6PVY3 158 aa15.31■□□□□ 0.04
SMIM11A-201ENST00000399292 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
SMIM11A-201ENST00000399292 MRS2Q9HD23 443 aa15.31■□□□□ 0.04
SMIM11A-201ENST00000399292 TSR3Q9UJK0 312 aaKnown RBP15.31■□□□□ 0.04
SMIM11A-201ENST00000399292 NRXN2Q9P2S2 1712 aa15.31■□□□□ 0.04
SMIM11A-201ENST00000399292 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
SMIM11A-201ENST00000399292 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
SMIM11A-201ENST00000399292 NECTIN2Q92692 538 aa15.3■□□□□ 0.04
SMIM11A-201ENST00000399292 ZBTB3Q9H5J0 574 aa15.3■□□□□ 0.04
SMIM11A-201ENST00000399292 GPBP1L1Q9HC44 474 aaPredicted RBP15.3■□□□□ 0.04
SMIM11A-201ENST00000399292 ATP10DQ9P241 1426 aa15.3■□□□□ 0.04
SMIM11A-201ENST00000399292 FAM198AQ9UFP1 575 aa15.3■□□□□ 0.04
SMIM11A-201ENST00000399292 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
SMIM11A-201ENST00000399292 ZNF853P0CG23 659 aa15.29■□□□□ 0.04
SMIM11A-201ENST00000399292 GNAI1P63096 354 aa15.29■□□□□ 0.04
SMIM11A-201ENST00000399292 C9orf131Q5VYM1 1079 aa15.29■□□□□ 0.04
SMIM11A-201ENST00000399292 ZNF526Q8TF50 670 aaPredicted RBP15.29■□□□□ 0.04
SMIM11A-201ENST00000399292 IFT57Q9NWB7 429 aa15.29■□□□□ 0.04
SMIM11A-201ENST00000399292 HPS5Q9UPZ3 1129 aa15.29■□□□□ 0.04
SMIM11A-201ENST00000399292 ADCY9O60503 1353 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms