RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CLCN1P35523 988 aa12.4□□□□□ -0.42
CPSF1P1-201ENST00000397477 Q6ZUG5 572 aa12.4□□□□□ -0.42
CPSF1P1-201ENST00000397477 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
CPSF1P1-201ENST00000397477 NEK1Q96PY6 1258 aa12.4□□□□□ -0.42
CPSF1P1-201ENST00000397477 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
CPSF1P1-201ENST00000397477 CNNM1Q9NRU3 951 aa12.4□□□□□ -0.42
CPSF1P1-201ENST00000397477 KRT85P78386 507 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 AKAP12Q02952 1782 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 SLIT1O75093 1534 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 ZNF445P59923 1031 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 RBM10P98175 930 aaKnown RBP12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 CDC37L1Q7L3B6 337 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 KIAA2012Q0VF49 1180 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 VPS53Q5VIR6 699 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 KIF6Q6ZMV9 814 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 SPATA32Q96LK8 384 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 PIK3C2AO00443 1686 aa12.39□□□□□ -0.43
CPSF1P1-201ENST00000397477 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
CPSF1P1-201ENST00000397477 SH2B1Q9NRF2 756 aaPredicted RBP12.38□□□□□ -0.43
CPSF1P1-201ENST00000397477 ADAMTS2O95450 1211 aa12.38□□□□□ -0.43
CPSF1P1-201ENST00000397477 CCDC158Q5M9N0 1113 aa12.38□□□□□ -0.43
CPSF1P1-201ENST00000397477 SYNE4Q8N205 404 aa12.38□□□□□ -0.43
CPSF1P1-201ENST00000397477 NCOA5Q9HCD5 579 aaKnown RBP12.38□□□□□ -0.43
CPSF1P1-201ENST00000397477 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
CPSF1P1-201ENST00000397477 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 METTL24Q5JXM2 366 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 DNAJC10Q8IXB1 793 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 PLBD2Q8NHP8 589 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 IL2RBP14784 551 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 APOBRQ0VD83 1088 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 GNL2Q13823 731 aaKnown RBP12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 SF3A1Q15459 793 aaKnown RBP12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 ZRSR1Q15695 479 aaKnown RBP12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 PDCP20941 246 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 ANKRD1Q15327 319 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 MCMDC2Q4G0Z9 681 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 PAG1Q9NWQ8 432 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 FAM13BQ9NYF5 915 aa12.37□□□□□ -0.43
CPSF1P1-201ENST00000397477 A0A1B0GUL7 405 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 MTX1Q13505 466 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 TTLL5Q6EMB2 1281 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 NBPF10Q6P3W6 841 aaKnown RBP12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 NBPF15Q8N660 670 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 ASAP1Q9ULH1 1129 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 CPLX1O14810 134 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 UBE2HP62256 183 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 MAP4K1Q92918 833 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 TTC14Q96N46 770 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 MTMR6Q9Y217 621 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 RPS6KB1P23443 525 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 NECTIN1Q15223 517 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 PI16Q6UXB8 463 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 C17orf53Q8N3J3 647 aaPredicted RBP12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 ACSBG1Q96GR2 724 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 C1orf167Q5SNV9 1468 aa12.36□□□□□ -0.43
CPSF1P1-201ENST00000397477 FER1L4A9Z1Z3 1794 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 RALYLQ86SE5 291 aaKnown RBP12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 TRMT112Q9UI30 125 aaKnown RBP12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 NPHP1O15259 732 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 ADCY5O95622 1261 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 CCDC144CPQ8IYA2 1237 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
CPSF1P1-201ENST00000397477 TAF5LO75529 589 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 RRP12Q5JTH9 1297 aaKnown RBP12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 OTUD7BQ6GQQ9 843 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 NUP62CLQ9H1M0 184 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 ADORA1P30542 326 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 DACT1Q9NYF0 836 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 KRT32Q14532 448 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 CLEC17AQ6ZS10 378 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 BRINP3Q76B58 766 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 COPRSQ9NQ92 184 aa12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 IQSEC3Q9UPP2 1182 aaPredicted RBP12.34□□□□□ -0.43
CPSF1P1-201ENST00000397477 A0A0G2JLW4 131 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 CYP21A2P08686 494 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 ATP5JP18859 108 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 STARD3NLO95772 234 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 RXRAP19793 462 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 GTF2E1P29083 439 aaPredicted RBP12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 ME1P48163 572 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 CCDC82Q8N4S0 544 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 EYA2O00167 538 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms