RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 SDF4Q9BRK5 362 aa17.32■□□□□ 0.36
CCNF-202ENST00000397066 PXDNLA1KZ92 1463 aa17.32■□□□□ 0.36
CCNF-202ENST00000397066 UTP14CQ5TAP6 766 aaKnown RBP17.32■□□□□ 0.36
CCNF-202ENST00000397066 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
CCNF-202ENST00000397066 CGNQ9P2M7 1197 aaKnown RBP17.31■□□□□ 0.36
CCNF-202ENST00000397066 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
CCNF-202ENST00000397066 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.31■□□□□ 0.36
CCNF-202ENST00000397066 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCNF-202ENST00000397066 NDUFB9Q9Y6M9 179 aa17.31■□□□□ 0.36
CCNF-202ENST00000397066 V9GYY5 206 aaPredicted RBP17.31■□□□□ 0.36
CCNF-202ENST00000397066 GUCY1B3Q02153 619 aa17.31■□□□□ 0.36
CCNF-202ENST00000397066 KLHL34Q8N239 644 aa17.31■□□□□ 0.36
CCNF-202ENST00000397066 PEAK1Q9H792 1746 aa17.31■□□□□ 0.36
CCNF-202ENST00000397066 ZNF589Q86UQ0 364 aaPredicted RBP17.3■□□□□ 0.36
CCNF-202ENST00000397066 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
CCNF-202ENST00000397066 CACTINQ8WUQ7 758 aaKnown RBP17.3■□□□□ 0.36
CCNF-202ENST00000397066 SPATA31D1Q6ZQQ2 1576 aa17.3■□□□□ 0.36
CCNF-202ENST00000397066 NRDCO43847 1150 aa17.3■□□□□ 0.36
CCNF-202ENST00000397066 SKILP12757 684 aa17.3■□□□□ 0.36
CCNF-202ENST00000397066 TAF6LQ9Y6J9 622 aa17.3■□□□□ 0.36
CCNF-202ENST00000397066 SASH1O94885 1247 aa17.3■□□□□ 0.36
CCNF-202ENST00000397066 STX1AQ16623 288 aa17.3■□□□□ 0.36
CCNF-202ENST00000397066 TDRD7Q8NHU6 1098 aaKnown RBP17.3■□□□□ 0.36
CCNF-202ENST00000397066 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
CCNF-202ENST00000397066 CCT2P78371 535 aaKnown RBP17.29■□□□□ 0.36
CCNF-202ENST00000397066 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
CCNF-202ENST00000397066 CCDC129Q6ZRS4 1044 aa17.29■□□□□ 0.36
CCNF-202ENST00000397066 FEZ1Q99689 392 aa17.29■□□□□ 0.36
CCNF-202ENST00000397066 ZSCAN16Q9H4T2 348 aaPredicted RBP17.29■□□□□ 0.36
CCNF-202ENST00000397066 ADCY9O60503 1353 aa17.29■□□□□ 0.36
CCNF-202ENST00000397066 COL9A3Q14050 684 aaPredicted RBP17.29■□□□□ 0.36
CCNF-202ENST00000397066 TOB2Q14106 344 aaPredicted RBP17.29■□□□□ 0.36
CCNF-202ENST00000397066 CAVIN2O95810 425 aa17.29■□□□□ 0.36
CCNF-202ENST00000397066 NCBP1Q09161 790 aaKnown RBP17.29■□□□□ 0.36
CCNF-202ENST00000397066 NEUROD6Q96NK8 337 aa17.29■□□□□ 0.36
CCNF-202ENST00000397066 OGFRQ9NZT2 677 aa17.29■□□□□ 0.36
CCNF-202ENST00000397066 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
CCNF-202ENST00000397066 MTX1Q13505 466 aa17.28■□□□□ 0.36
CCNF-202ENST00000397066 NAA30Q147X3 362 aaPredicted RBP17.28■□□□□ 0.36
CCNF-202ENST00000397066 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
CCNF-202ENST00000397066 PGBD1Q96JS3 809 aa17.28■□□□□ 0.36
CCNF-202ENST00000397066 NAT10Q9H0A0 1025 aaKnown RBP17.28■□□□□ 0.36
CCNF-202ENST00000397066 CEP57L1Q8IYX8 460 aa17.28■□□□□ 0.36
CCNF-202ENST00000397066 ZNF396Q96N95 335 aaPredicted RBP17.28■□□□□ 0.36
CCNF-202ENST00000397066 USP16Q9Y5T5 823 aa17.28■□□□□ 0.36
CCNF-202ENST00000397066 MYD88Q99836 296 aa17.28■□□□□ 0.36
CCNF-202ENST00000397066 SMC2O95347 1197 aa17.27■□□□□ 0.36
CCNF-202ENST00000397066 GTF3C6Q969F1 213 aa17.27■□□□□ 0.36
CCNF-202ENST00000397066 ANKRD7Q92527 254 aa17.27■□□□□ 0.36
CCNF-202ENST00000397066 IP6K1Q92551 441 aa17.27■□□□□ 0.36
CCNF-202ENST00000397066 ANO10Q9NW15 660 aa17.27■□□□□ 0.36
CCNF-202ENST00000397066 AKAP12Q02952 1782 aa17.27■□□□□ 0.36
CCNF-202ENST00000397066 A0A087WWV3 80 aa17.27■□□□□ 0.35
CCNF-202ENST00000397066 CTAGE5O15320 804 aa17.27■□□□□ 0.35
CCNF-202ENST00000397066 PLA2G4DQ86XP0 818 aa17.27■□□□□ 0.35
CCNF-202ENST00000397066 FSIP1Q8NA03 581 aa17.27■□□□□ 0.35
CCNF-202ENST00000397066 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.35
CCNF-202ENST00000397066 CCDC144BQ3MJ40 725 aa17.27■□□□□ 0.35
CCNF-202ENST00000397066 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.35
CCNF-202ENST00000397066 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.35
CCNF-202ENST00000397066 CCDC69A6NI79 296 aa17.26■□□□□ 0.35
CCNF-202ENST00000397066 KCNB2Q92953 911 aa17.26■□□□□ 0.35
CCNF-202ENST00000397066 NEMFO60524 1076 aa17.26■□□□□ 0.35
CCNF-202ENST00000397066 ARID5BQ14865 1188 aa17.26■□□□□ 0.35
CCNF-202ENST00000397066 ESCO1Q5FWF5 840 aa17.26■□□□□ 0.35
CCNF-202ENST00000397066 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
CCNF-202ENST00000397066 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
CCNF-202ENST00000397066 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
CCNF-202ENST00000397066 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
CCNF-202ENST00000397066 CTIFO43310 598 aaKnown RBP17.26■□□□□ 0.35
CCNF-202ENST00000397066 TPM4P67936 248 aa17.26■□□□□ 0.35
CCNF-202ENST00000397066 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
CCNF-202ENST00000397066 TAF5LO75529 589 aa17.25■□□□□ 0.35
CCNF-202ENST00000397066 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
CCNF-202ENST00000397066 TSPOAP1O95153 1857 aa17.25■□□□□ 0.35
CCNF-202ENST00000397066 KIF20AO95235 890 aa17.25■□□□□ 0.35
CCNF-202ENST00000397066 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
CCNF-202ENST00000397066 PLEKHG1Q9ULL1 1385 aa17.25■□□□□ 0.35
CCNF-202ENST00000397066 LRRC8AQ8IWT6 810 aa17.25■□□□□ 0.35
CCNF-202ENST00000397066 AOPEPQ8N6M6 819 aa17.25■□□□□ 0.35
CCNF-202ENST00000397066 KIF18AQ8NI77 898 aa17.25■□□□□ 0.35
CCNF-202ENST00000397066 SEC62Q99442 399 aaKnown RBP17.25■□□□□ 0.35
CCNF-202ENST00000397066 FTOQ9C0B1 505 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCNF-202ENST00000397066 HOMER1Q86YM7 354 aa17.24■□□□□ 0.35
CCNF-202ENST00000397066 A0A0U1RQG5 324 aaPredicted RBP17.24■□□□□ 0.35
CCNF-202ENST00000397066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.24■□□□□ 0.35
CCNF-202ENST00000397066 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
CCNF-202ENST00000397066 APOBRQ0VD83 1088 aa17.24■□□□□ 0.35
CCNF-202ENST00000397066 TFCP2Q12800 502 aa17.23■□□□□ 0.35
CCNF-202ENST00000397066 RESTQ13127 1097 aa17.23■□□□□ 0.35
CCNF-202ENST00000397066 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
CCNF-202ENST00000397066 STK38Q15208 465 aa17.23■□□□□ 0.35
CCNF-202ENST00000397066 KCNA6P17658 529 aa17.23■□□□□ 0.35
CCNF-202ENST00000397066 MCMDC2Q4G0Z9 681 aa17.23■□□□□ 0.35
CCNF-202ENST00000397066 TBX22Q9Y458 520 aa17.23■□□□□ 0.35
CCNF-202ENST00000397066 PTPDC1A2A3K4 754 aa17.22■□□□□ 0.35
CCNF-202ENST00000397066 GORABQ5T7V8 394 aa17.22■□□□□ 0.35
CCNF-202ENST00000397066 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
CCNF-202ENST00000397066 XAGE3Q8WTP9 111 aa17.22■□□□□ 0.35
CCNF-202ENST00000397066 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms