RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 RPGRQ92834 1020 aaKnown RBP14.18□□□□□ -0.14
ATN1-202ENST00000396684 IMMTQ16891 758 aaKnown RBP14.18□□□□□ -0.14
ATN1-202ENST00000396684 OSBPL3Q9H4L5 887 aa14.18□□□□□ -0.14
ATN1-202ENST00000396684 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
ATN1-202ENST00000396684 PDCP20941 246 aa14.18□□□□□ -0.14
ATN1-202ENST00000396684 EAF2Q96CJ1 260 aaPredicted RBP14.18□□□□□ -0.14
ATN1-202ENST00000396684 PEAK1Q9H792 1746 aa14.17□□□□□ -0.14
ATN1-202ENST00000396684 NMIQ13287 307 aaPredicted RBP14.17□□□□□ -0.14
ATN1-202ENST00000396684 SNX21Q969T3 373 aa14.17□□□□□ -0.14
ATN1-202ENST00000396684 ANKIB1Q9P2G1 1089 aa14.17□□□□□ -0.14
ATN1-202ENST00000396684 STAP2Q9UGK3 403 aa14.17□□□□□ -0.14
ATN1-202ENST00000396684 NWD1Q149M9 1564 aa14.17□□□□□ -0.14
ATN1-202ENST00000396684 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
ATN1-202ENST00000396684 SART3Q15020 963 aaKnown RBP14.17□□□□□ -0.14
ATN1-202ENST00000396684 NKX1-1Q15270 411 aaPredicted RBP14.17□□□□□ -0.14
ATN1-202ENST00000396684 TRAPPC3LQ5T215 181 aa14.17□□□□□ -0.14
ATN1-202ENST00000396684 HELBQ8NG08 1087 aaPredicted RBP14.17□□□□□ -0.14
ATN1-202ENST00000396684 COL5A2P05997 1499 aaPredicted RBP14.16□□□□□ -0.14
ATN1-202ENST00000396684 ZFYP08048 801 aaPredicted RBP14.16□□□□□ -0.14
ATN1-202ENST00000396684 CHAF1AQ13111 956 aaPredicted RBP14.16□□□□□ -0.14
ATN1-202ENST00000396684 SLIT3O75094 1523 aa14.16□□□□□ -0.14
ATN1-202ENST00000396684 STK3Q13188 491 aa14.16□□□□□ -0.14
ATN1-202ENST00000396684 TDO2P48775 406 aa14.16□□□□□ -0.14
ATN1-202ENST00000396684 PLCB2Q00722 1185 aa14.16□□□□□ -0.14
ATN1-202ENST00000396684 MTX1Q13505 466 aa14.16□□□□□ -0.14
ATN1-202ENST00000396684 RRP12Q5JTH9 1297 aaKnown RBP14.16□□□□□ -0.14
ATN1-202ENST00000396684 RBM8AQ9Y5S9 174 aaKnown RBP14.16□□□□□ -0.14
ATN1-202ENST00000396684 NBPF26B4DH59 902 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 MCMDC2Q4G0Z9 681 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 NBPF14Q5TI25 921 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 NBPF10Q6P3W6 841 aaKnown RBP14.15□□□□□ -0.14
ATN1-202ENST00000396684 NBPF15Q8N660 670 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 SPATA31A1Q5TZJ5 1347 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 PXDNLA1KZ92 1463 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 HMG20BQ9P0W2 317 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 IL27Q8NEV9 243 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
ATN1-202ENST00000396684 QTRT2Q9H974 415 aaKnown RBP14.15□□□□□ -0.14
ATN1-202ENST00000396684 LIMCH1Q9UPQ0 1083 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 RAD50Q92878 1312 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
ATN1-202ENST00000396684 CTSWP56202 376 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 TRIM29Q14134 588 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 SF3A1Q15459 793 aaKnown RBP14.15□□□□□ -0.14
ATN1-202ENST00000396684 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
ATN1-202ENST00000396684 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
ATN1-202ENST00000396684 ST5P78524 1137 aa14.14□□□□□ -0.15
ATN1-202ENST00000396684 FAM182BQ5T319 152 aa14.14□□□□□ -0.15
ATN1-202ENST00000396684 ATP10DQ9P241 1426 aa14.14□□□□□ -0.15
ATN1-202ENST00000396684 WDR33Q9C0J8 1336 aaKnown RBP14.14□□□□□ -0.15
ATN1-202ENST00000396684 SGSM2O43147 1006 aa14.14□□□□□ -0.15
ATN1-202ENST00000396684 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
ATN1-202ENST00000396684 HMGB1P09429 215 aaKnown RBP14.13□□□□□ -0.15
ATN1-202ENST00000396684 LTN1O94822 1766 aa14.13□□□□□ -0.15
ATN1-202ENST00000396684 ERVV-1B6SEH8 477 aa14.13□□□□□ -0.15
ATN1-202ENST00000396684 H7C1W4 665 aa14.13□□□□□ -0.15
ATN1-202ENST00000396684 FOSBP53539 338 aa14.13□□□□□ -0.15
ATN1-202ENST00000396684 SH2B1Q9NRF2 756 aaPredicted RBP14.13□□□□□ -0.15
ATN1-202ENST00000396684 TRAK2O60296 914 aa14.13□□□□□ -0.15
ATN1-202ENST00000396684 ATP5JP18859 108 aa14.13□□□□□ -0.15
ATN1-202ENST00000396684 MCM4P33991 863 aa14.13□□□□□ -0.15
ATN1-202ENST00000396684 SLC3A2P08195 630 aaKnown RBP14.12□□□□□ -0.15
ATN1-202ENST00000396684 NLRP10Q86W26 655 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 XAGE2Q96GT9 111 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 NAPBQ9H115 298 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 CCDC83Q8IWF9 413 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 ZNF213O14771 459 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 CYP19A1P11511 503 aaPredicted RBP14.12□□□□□ -0.15
ATN1-202ENST00000396684 PDIA6Q15084 440 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 CCDC171Q6TFL3 1326 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 EPHA10Q5JZY3 1008 aa14.12□□□□□ -0.15
ATN1-202ENST00000396684 AFF2P51816 1311 aa14.11□□□□□ -0.15
ATN1-202ENST00000396684 SPATA31A6Q5VVP1 1343 aa14.11□□□□□ -0.15
ATN1-202ENST00000396684 PTPN12Q05209 780 aaKnown RBP14.11□□□□□ -0.15
ATN1-202ENST00000396684 PUM3Q15397 648 aaKnown RBP14.11□□□□□ -0.15
ATN1-202ENST00000396684 LRRC24Q50LG9 513 aa14.11□□□□□ -0.15
ATN1-202ENST00000396684 RNF113AO15541 343 aaKnown RBP14.11□□□□□ -0.15
ATN1-202ENST00000396684 SLC9C2Q5TAH2 1124 aa14.11□□□□□ -0.15
ATN1-202ENST00000396684 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
ATN1-202ENST00000396684 VPS72Q15906 364 aa14.11□□□□□ -0.15
ATN1-202ENST00000396684 LARP1BQ659C4 914 aaKnown RBP14.11□□□□□ -0.15
ATN1-202ENST00000396684 TMX3Q96JJ7 454 aa14.11□□□□□ -0.15
ATN1-202ENST00000396684 NEK1Q96PY6 1258 aa14.11□□□□□ -0.15
ATN1-202ENST00000396684 LARP6Q9BRS8 491 aaKnown RBP14.11□□□□□ -0.15
ATN1-202ENST00000396684 IQSEC3Q9UPP2 1182 aaPredicted RBP14.11□□□□□ -0.15
ATN1-202ENST00000396684 PLEKHG2Q9H7P9 1386 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 KCNQ4P56696 695 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 SPATA31A5Q5VU36 1347 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 SPATA31A7Q8IWB4 1347 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 KBTBD3Q8NAB2 608 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 FAM227BQ96M60 508 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 SASH1O94885 1247 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 SEPT12Q8IYM1 358 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 CNBD1Q8NA66 436 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 GREM2Q9H772 168 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 NDUFB9Q9Y6M9 179 aa14.1□□□□□ -0.15
ATN1-202ENST00000396684 HLFQ16534 295 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms