RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 GRM8O00222 908 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 OFD1O75665 1012 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 SYAP1Q96A49 352 aaPredicted RBP11.11□□□□□ -0.63
NDE1-201ENST00000396354 FSD1Q9BTV5 496 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 ZKSCAN5Q9Y2L8 839 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 TOGARAM1Q9Y4F4 1720 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 ABCC6O95255 1503 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 WDR33Q9C0J8 1336 aaKnown RBP11.11□□□□□ -0.63
NDE1-201ENST00000396354 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 RRP9O43818 475 aaKnown RBP11.11□□□□□ -0.63
NDE1-201ENST00000396354 CCDC85AQ96PX6 553 aaPredicted RBP11.11□□□□□ -0.63
NDE1-201ENST00000396354 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 HYPKQ9NX55 129 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 AFDNP55196 1824 aaKnown RBP11.11□□□□□ -0.63
NDE1-201ENST00000396354 NBPF26B4DH59 902 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 HSP90B1P14625 803 aaKnown RBP11.11□□□□□ -0.63
NDE1-201ENST00000396354 NBPF14Q5TI25 921 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 NBPF10Q6P3W6 841 aaKnown RBP11.11□□□□□ -0.63
NDE1-201ENST00000396354 NBPF15Q8N660 670 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 MYD88Q99836 296 aa11.11□□□□□ -0.63
NDE1-201ENST00000396354 UTYO14607 1347 aa11.1□□□□□ -0.63
NDE1-201ENST00000396354 PARP4Q9UKK3 1724 aaKnown RBP11.1□□□□□ -0.63
NDE1-201ENST00000396354 ALDH1L1O75891 902 aa11.1□□□□□ -0.63
NDE1-201ENST00000396354 KIAA2012Q0VF49 1180 aa11.1□□□□□ -0.63
NDE1-201ENST00000396354 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
NDE1-201ENST00000396354 NOL7Q9UMY1 257 aaKnown RBP11.1□□□□□ -0.63
NDE1-201ENST00000396354 ATP5J2-PTCD1G3V325 749 aa11.1□□□□□ -0.63
NDE1-201ENST00000396354 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
NDE1-201ENST00000396354 RAB11FIP3O75154 756 aa11.1□□□□□ -0.63
NDE1-201ENST00000396354 CCDC39Q9UFE4 941 aa11.1□□□□□ -0.63
NDE1-201ENST00000396354 CCDC129Q6ZRS4 1044 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 RAB11FIP4Q86YS3 637 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 ERCC4Q92889 916 aaPredicted RBP11.09□□□□□ -0.63
NDE1-201ENST00000396354 EAF2Q96CJ1 260 aaPredicted RBP11.09□□□□□ -0.63
NDE1-201ENST00000396354 DCAF5Q96JK2 942 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
NDE1-201ENST00000396354 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 UBR2Q8IWV8 1755 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 SGSM2O43147 1006 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 GUCY1B3Q02153 619 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 LARP1BQ659C4 914 aaKnown RBP11.09□□□□□ -0.63
NDE1-201ENST00000396354 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
NDE1-201ENST00000396354 PRDM11Q9NQV5 511 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.631e-8■□□□□ 10
NDE1-201ENST00000396354 LIMCH1Q9UPQ0 1083 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 LAMB4A4D0S4 1761 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 AOX1Q06278 1338 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 IGSF3O75054 1194 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
NDE1-201ENST00000396354 HSPA4P34932 840 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 GCKRQ14397 625 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 RIC3Q7Z5B4 369 aa11.09□□□□□ -0.63
NDE1-201ENST00000396354 WDR17Q8IZU2 1322 aa11.08□□□□□ -0.64
NDE1-201ENST00000396354 USP42Q9H9J4 1324 aaKnown RBP11.08□□□□□ -0.64
NDE1-201ENST00000396354 CHST3Q7LGC8 479 aa11.08□□□□□ -0.64
NDE1-201ENST00000396354 TJP1Q07157 1748 aa11.08□□□□□ -0.64
NDE1-201ENST00000396354 TPM2P07951 284 aa11.08□□□□□ -0.64
NDE1-201ENST00000396354 TTLL7Q6ZT98 887 aa11.08□□□□□ -0.64
NDE1-201ENST00000396354 LSG1Q9H089 658 aaKnown RBP11.08□□□□□ -0.64
NDE1-201ENST00000396354 CYP46A1Q9Y6A2 500 aa11.08□□□□□ -0.64
NDE1-201ENST00000396354 PAPPAQ13219 1627 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 MCM2P49736 904 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 G3BP1Q13283 466 aaKnown RBP eCLIP11.07□□□□□ -0.64
NDE1-201ENST00000396354 NMIQ13287 307 aaPredicted RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 ME3Q16798 604 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 SEC62Q99442 399 aaKnown RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 METTL22Q9BUU2 404 aaPredicted RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 RBM8AQ9Y5S9 174 aaKnown RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 NUP188Q5SRE5 1749 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 COL16A1Q07092 1604 aaPredicted RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 ZKSCAN1P17029 563 aaPredicted RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 LUZP1Q86V48 1076 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 BICD2Q8TD16 824 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 STRN4Q9NRL3 753 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 RAD50Q92878 1312 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 A0A0G2JS52 829 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 F13A1P00488 732 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 SNRPA1P09661 255 aaKnown RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 RFX5P48382 616 aaPredicted RBP11.07□□□□□ -0.64
NDE1-201ENST00000396354 CABP4P57796 275 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 NEUROD6Q96NK8 337 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
NDE1-201ENST00000396354 A0A0D9SFI3 127 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 NUTM2BA6NNL0 878 aaPredicted RBP11.06□□□□□ -0.64
NDE1-201ENST00000396354 NUTM2EB1AL46 878 aaPredicted RBP11.06□□□□□ -0.64
NDE1-201ENST00000396354 A1BGP04217 495 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 CASP7P55210 303 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 NUTM2AQ8IVF1 878 aaPredicted RBP11.06□□□□□ -0.64
NDE1-201ENST00000396354 TCHHQ07283 1943 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 PHF14O94880 888 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 CUL4AQ13619 759 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms