RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 GSPT1P15170 499 aaKnown RBP30.22■■■□□ 2.43
CTF1-202ENST00000395019 SUSD4Q5VX71 490 aa30.22■■■□□ 2.43
CTF1-202ENST00000395019 IL1RAPL2Q9NP60 686 aa30.22■■■□□ 2.43
CTF1-202ENST00000395019 G3BP1Q13283 466 aaKnown RBP eCLIP30.22■■■□□ 2.43
CTF1-202ENST00000395019 LMBR1LQ6UX01 489 aa30.22■■■□□ 2.43
CTF1-202ENST00000395019 NLGN1Q8N2Q7 840 aa30.22■■■□□ 2.43
CTF1-202ENST00000395019 NRXN2Q9P2S2 1712 aa30.21■■■□□ 2.43
CTF1-202ENST00000395019 RTL5Q5HYW3 569 aaPredicted RBP30.21■■■□□ 2.43
CTF1-202ENST00000395019 SETDB2Q96T68 719 aa30.21■■■□□ 2.43
CTF1-202ENST00000395019 PLA2G12BQ9BX93 195 aa30.21■■■□□ 2.43
CTF1-202ENST00000395019 STAP2Q9UGK3 403 aa30.21■■■□□ 2.43
CTF1-202ENST00000395019 CDHR2Q9BYE9 1310 aa30.2■■■□□ 2.43
CTF1-202ENST00000395019 SLC16A10Q8TF71 515 aa30.2■■■□□ 2.43
CTF1-202ENST00000395019 ATF5Q9Y2D1 282 aaPredicted RBP30.2■■■□□ 2.43
CTF1-202ENST00000395019 MMP10P09238 476 aa30.19■■■□□ 2.42
CTF1-202ENST00000395019 MX1P20591 662 aa30.19■■■□□ 2.42
CTF1-202ENST00000395019 SYNE4Q8N205 404 aa30.19■■■□□ 2.42
CTF1-202ENST00000395019 DDX60Q8IY21 1712 aaKnown RBP30.19■■■□□ 2.42
CTF1-202ENST00000395019 POLRMTO00411 1230 aaKnown RBP30.18■■■□□ 2.42
CTF1-202ENST00000395019 SEC24BO95487 1268 aa30.18■■■□□ 2.42
CTF1-202ENST00000395019 PTPN12Q05209 780 aaKnown RBP30.18■■■□□ 2.42
CTF1-202ENST00000395019 CARMIL3Q8ND23 1372 aa30.18■■■□□ 2.42
CTF1-202ENST00000395019 AOX1Q06278 1338 aa30.18■■■□□ 2.42
CTF1-202ENST00000395019 FAM89AQ96GI7 184 aa30.18■■■□□ 2.42
CTF1-202ENST00000395019 NTSR2O95665 410 aa30.17■■■□□ 2.42
CTF1-202ENST00000395019 CLASRPQ8N2M8 674 aaKnown RBP30.16■■■□□ 2.42
CTF1-202ENST00000395019 CCDC24Q8N4L8 307 aa30.16■■■□□ 2.42
CTF1-202ENST00000395019 KLHDC4Q8TBB5 520 aa30.16■■■□□ 2.42
CTF1-202ENST00000395019 MTFR1LQ9H019 292 aa30.16■■■□□ 2.42
CTF1-202ENST00000395019 SASH1O94885 1247 aa30.15■■■□□ 2.42
CTF1-202ENST00000395019 PARP10Q53GL7 1025 aa30.15■■■□□ 2.42
CTF1-202ENST00000395019 NUTM1Q86Y26 1132 aa30.15■■■□□ 2.42
CTF1-202ENST00000395019 LAMB2P55268 1798 aa30.15■■■□□ 2.42
CTF1-202ENST00000395019 ANP32AP39687 249 aaKnown RBP30.14■■■□□ 2.42
CTF1-202ENST00000395019 ANKRD31Q8N7Z5 1873 aa30.14■■■□□ 2.42
CTF1-202ENST00000395019 SIL1Q9H173 461 aa30.14■■■□□ 2.41
CTF1-202ENST00000395019 TRMT112Q9UI30 125 aaKnown RBP30.14■■■□□ 2.41
CTF1-202ENST00000395019 TNRC6CQ9HCJ0 1690 aaKnown RBP30.14■■■□□ 2.41
CTF1-202ENST00000395019 SERPINB2P05120 415 aa30.13■■■□□ 2.41
CTF1-202ENST00000395019 UTP14AQ9BVJ6 771 aaKnown RBP30.13■■■□□ 2.41
CTF1-202ENST00000395019 CHMP3Q9Y3E7 222 aa30.13■■■□□ 2.41
CTF1-202ENST00000395019 CSF1RP07333 972 aa30.12■■■□□ 2.41
CTF1-202ENST00000395019 NBPF5PQ86XG9 351 aaPredicted RBP30.12■■■□□ 2.41
CTF1-202ENST00000395019 ABCC12Q96J65 1359 aa30.12■■■□□ 2.41
CTF1-202ENST00000395019 SRCAPQ6ZRS2 3230 aa30.12■■■□□ 2.41
CTF1-202ENST00000395019 MYH3P11055 1940 aa30.12■■■□□ 2.41
CTF1-202ENST00000395019 CDC45O75419 566 aa30.11■■■□□ 2.41
CTF1-202ENST00000395019 SDSP20132 328 aa30.11■■■□□ 2.41
CTF1-202ENST00000395019 ERFEQ4G0M1 354 aa30.11■■■□□ 2.41
CTF1-202ENST00000395019 SGIP1Q9BQI5 828 aa30.11■■■□□ 2.41
CTF1-202ENST00000395019 PRR5LQ6MZQ0 368 aa30.1■■■□□ 2.41
CTF1-202ENST00000395019 UPF2Q9HAU5 1272 aaKnown RBP30.1■■■□□ 2.41
CTF1-202ENST00000395019 PARP3Q9Y6F1 533 aa30.1■■■□□ 2.41
CTF1-202ENST00000395019 PTGER2P43116 358 aa30.09■■■□□ 2.41
CTF1-202ENST00000395019 TSHZ3Q63HK5 1081 aa30.09■■■□□ 2.41
CTF1-202ENST00000395019 IRS4O14654 1257 aaPredicted RBP30.08■■■□□ 2.41
CTF1-202ENST00000395019 TBC1D9Q6ZT07 1266 aa30.08■■■□□ 2.41
CTF1-202ENST00000395019 TTC41PQ6P2S7 1318 aa30.08■■■□□ 2.41
CTF1-202ENST00000395019 SH3TC1Q8TE82 1336 aa30.07■■■□□ 2.4
CTF1-202ENST00000395019 IFIT2P09913 472 aaKnown RBP30.07■■■□□ 2.4
CTF1-202ENST00000395019 CNBD1Q8NA66 436 aa30.07■■■□□ 2.4
CTF1-202ENST00000395019 PDE8AO60658 829 aa30.06■■■□□ 2.4
CTF1-202ENST00000395019 HCLS1P14317 486 aaPredicted RBP30.06■■■□□ 2.4
CTF1-202ENST00000395019 CCDC57Q2TAC2 916 aa30.06■■■□□ 2.4
CTF1-202ENST00000395019 AACSQ86V21 672 aa30.06■■■□□ 2.4
CTF1-202ENST00000395019 NYXQ9GZU5 481 aa30.06■■■□□ 2.4
CTF1-202ENST00000395019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.06■■■□□ 2.4
CTF1-202ENST00000395019 CTSWP56202 376 aa30.05■■■□□ 2.4
CTF1-202ENST00000395019 TPTE2Q6XPS3 522 aa30.05■■■□□ 2.4
CTF1-202ENST00000395019 PI4K2BQ8TCG2 481 aa30.05■■■□□ 2.4
CTF1-202ENST00000395019 EAF2Q96CJ1 260 aaPredicted RBP30.05■■■□□ 2.4
CTF1-202ENST00000395019 CIAO1O76071 339 aa30.04■■■□□ 2.4
CTF1-202ENST00000395019 C3orf67Q6ZVT6 689 aa30.04■■■□□ 2.4
CTF1-202ENST00000395019 TTLL11Q8NHH1 800 aa30.04■■■□□ 2.4
CTF1-202ENST00000395019 FBXO3Q9UK99 471 aa30.04■■■□□ 2.4
CTF1-202ENST00000395019 KIF13BQ9NQT8 1826 aa30.04■■■□□ 2.4
CTF1-202ENST00000395019 GPATCH3Q96I76 525 aa30.04■■■□□ 2.4
CTF1-202ENST00000395019 COL11A2P13942 1736 aaPredicted RBP30.03■■■□□ 2.4
CTF1-202ENST00000395019 TAF1P21675 1872 aa30.03■■■□□ 2.4
CTF1-202ENST00000395019 EYA2O00167 538 aa30.03■■■□□ 2.4
CTF1-202ENST00000395019 EIF5BO60841 1220 aaKnown RBP30.03■■■□□ 2.4
CTF1-202ENST00000395019 GTF2E1P29083 439 aaPredicted RBP30.03■■■□□ 2.4
CTF1-202ENST00000395019 IL15P40933 162 aaPredicted RBP30.03■■■□□ 2.4
CTF1-202ENST00000395019 MFAP1P55081 439 aaKnown RBP30.03■■■□□ 2.4
CTF1-202ENST00000395019 ATG9AQ7Z3C6 839 aa30.03■■■□□ 2.4
CTF1-202ENST00000395019 ECHDC1Q9NTX5 307 aa30.03■■■□□ 2.4
CTF1-202ENST00000395019 NPHP1O15259 732 aa30.02■■■□□ 2.4
CTF1-202ENST00000395019 TFCP2Q12800 502 aa30.02■■■□□ 2.4
CTF1-202ENST00000395019 IFIT5Q13325 482 aaKnown RBP30.02■■■□□ 2.4
CTF1-202ENST00000395019 GLRX3O76003 335 aaKnown RBP30.01■■■□□ 2.39
CTF1-202ENST00000395019 TBC1D32Q96NH3 1257 aa30.01■■■□□ 2.39
CTF1-202ENST00000395019 ERC2O15083 957 aa30■■■□□ 2.39
CTF1-202ENST00000395019 HSP90B1P14625 803 aaKnown RBP30■■■□□ 2.39
CTF1-202ENST00000395019 TNNI3KQ59H18 835 aa30■■■□□ 2.39
CTF1-202ENST00000395019 ZNF594Q96JF6 807 aaPredicted RBP30■■■□□ 2.39
CTF1-202ENST00000395019 FPGT-TNNI3KV9GXZ4 949 aa30■■■□□ 2.39
CTF1-202ENST00000395019 POLD1P28340 1107 aa30■■■□□ 2.39
CTF1-202ENST00000395019 SPON1Q9HCB6 807 aa30■■■□□ 2.39
CTF1-202ENST00000395019 C10orf71Q711Q0 1435 aa29.99■■■□□ 2.39
CTF1-202ENST00000395019 KIAA1551Q9HCM1 1747 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms