RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 C9orf78Q9NZ63 289 aaPredicted RBP25.2■■□□□ 1.62
SNCA-203ENST00000394986 PPEF1O14829 653 aaPredicted RBP25.19■■□□□ 1.62
SNCA-203ENST00000394986 TRIM27P14373 513 aa25.19■■□□□ 1.62
SNCA-203ENST00000394986 SEC31BQ9NQW1 1179 aa25.19■■□□□ 1.62
SNCA-203ENST00000394986 NFKBIEO00221 500 aa25.18■■□□□ 1.62
SNCA-203ENST00000394986 GRAPQ13588 217 aa25.18■■□□□ 1.62
SNCA-203ENST00000394986 ATF7IPQ6VMQ6 1270 aa25.18■■□□□ 1.62
SNCA-203ENST00000394986 GRAPLQ8TC17 118 aaPredicted RBP25.18■■□□□ 1.62
SNCA-203ENST00000394986 CLUAP1Q96AJ1 413 aa25.18■■□□□ 1.62
SNCA-203ENST00000394986 IPO8O15397 1037 aaKnown RBP25.17■■□□□ 1.62
SNCA-203ENST00000394986 NBPF7P0C2Y1 421 aaPredicted RBP25.17■■□□□ 1.62
SNCA-203ENST00000394986 CCDC152Q4G0S7 254 aa25.17■■□□□ 1.62
SNCA-203ENST00000394986 TTLL11Q8NHH1 800 aa25.17■■□□□ 1.62
SNCA-203ENST00000394986 CELF1Q92879 486 aaKnown RBP25.17■■□□□ 1.62
SNCA-203ENST00000394986 PLA2G12BQ9BX93 195 aa25.16■■□□□ 1.62
SNCA-203ENST00000394986 CCT4P50991 539 aaKnown RBP25.15■■□□□ 1.62
SNCA-203ENST00000394986 CCDC93Q567U6 631 aa25.15■■□□□ 1.62
SNCA-203ENST00000394986 EPHA10Q5JZY3 1008 aa25.15■■□□□ 1.62
SNCA-203ENST00000394986 ZKSCAN2Q63HK3 967 aa25.15■■□□□ 1.62
SNCA-203ENST00000394986 GREM2Q9H772 168 aa25.15■■□□□ 1.62
SNCA-203ENST00000394986 PRELPP51888 382 aa25.14■■□□□ 1.62
SNCA-203ENST00000394986 SUCLG2Q96I99 432 aa25.14■■□□□ 1.62
SNCA-203ENST00000394986 RCAN3Q9UKA8 241 aa25.14■■□□□ 1.62
SNCA-203ENST00000394986 TAF1P21675 1872 aa25.13■■□□□ 1.61
SNCA-203ENST00000394986 FOXO4P98177 505 aa25.13■■□□□ 1.61
SNCA-203ENST00000394986 SOGA3Q5TF21 947 aa25.13■■□□□ 1.61
SNCA-203ENST00000394986 USP44Q9H0E7 712 aa25.13■■□□□ 1.61
SNCA-203ENST00000394986 UTYO14607 1347 aa25.13■■□□□ 1.61
SNCA-203ENST00000394986 FAM161AQ3B820 660 aa25.12■■□□□ 1.61
SNCA-203ENST00000394986 KAZALD1Q96I82 304 aa25.12■■□□□ 1.61
SNCA-203ENST00000394986 SNED1Q8TER0 1413 aa25.12■■□□□ 1.61
SNCA-203ENST00000394986 BBOX1O75936 387 aa25.12■■□□□ 1.61
SNCA-203ENST00000394986 ATP6V0A2Q9Y487 856 aa25.12■■□□□ 1.61
SNCA-203ENST00000394986 CSF1RP07333 972 aa25.11■■□□□ 1.61
SNCA-203ENST00000394986 YY1P25490 414 aa25.11■■□□□ 1.61
SNCA-203ENST00000394986 INTS3Q68E01 1043 aaKnown RBP25.11■■□□□ 1.61
SNCA-203ENST00000394986 TAOK3Q9H2K8 898 aa25.11■■□□□ 1.61
SNCA-203ENST00000394986 RPS8P62241 208 aaKnown RBP25.1■■□□□ 1.61
SNCA-203ENST00000394986 C9orf131Q5VYM1 1079 aa25.1■■□□□ 1.61
SNCA-203ENST00000394986 LMBR1LQ6UX01 489 aa25.1■■□□□ 1.61
SNCA-203ENST00000394986 RTL9Q8NET4 1388 aa25.09■■□□□ 1.61
SNCA-203ENST00000394986 RLBP1P12271 317 aa25.09■■□□□ 1.61
SNCA-203ENST00000394986 ITGA6P23229 1130 aa25.09■■□□□ 1.61
SNCA-203ENST00000394986 TMEM57Q8N5G2 664 aa25.09■■□□□ 1.61
SNCA-203ENST00000394986 RNF181Q9P0P0 153 aa25.09■■□□□ 1.61
SNCA-203ENST00000394986 CHMP3Q9Y3E7 222 aa25.09■■□□□ 1.61
SNCA-203ENST00000394986 FKBP4Q02790 459 aaKnown RBP eCLIP25.08■■□□□ 1.61
SNCA-203ENST00000394986 CC2D2BQ6DHV5 1058 aa25.08■■□□□ 1.61
SNCA-203ENST00000394986 SP8Q8IXZ3 490 aa25.08■■□□□ 1.61
SNCA-203ENST00000394986 RTKN2Q8IZC4 609 aa25.08■■□□□ 1.61
SNCA-203ENST00000394986 MEIS3Q99687 375 aa25.08■■□□□ 1.61
SNCA-203ENST00000394986 BICC1Q9H694 974 aaKnown RBP25.08■■□□□ 1.61
SNCA-203ENST00000394986 FER1L6Q2WGJ9 1857 aa25.08■■□□□ 1.61
SNCA-203ENST00000394986 LTBP3Q9NS15 1303 aa25.07■■□□□ 1.6
SNCA-203ENST00000394986 PLIN1O60240 522 aa25.07■■□□□ 1.6
SNCA-203ENST00000394986 FTSJ3Q8IY81 847 aaKnown RBP25.07■■□□□ 1.6
SNCA-203ENST00000394986 MYH3P11055 1940 aa25.07■■□□□ 1.6
SNCA-203ENST00000394986 CHD4Q14839 1912 aa25.06■■□□□ 1.6
SNCA-203ENST00000394986 LMNB1P20700 586 aa25.06■■□□□ 1.6
SNCA-203ENST00000394986 ANKRD18AQ8IVF6 992 aa25.06■■□□□ 1.6
SNCA-203ENST00000394986 DZIP1LQ8IYY4 767 aaKnown RBP25.06■■□□□ 1.6
SNCA-203ENST00000394986 CDC5LQ99459 802 aaKnown RBP25.06■■□□□ 1.6
SNCA-203ENST00000394986 TMX4Q9H1E5 349 aaPredicted RBP25.06■■□□□ 1.6
SNCA-203ENST00000394986 ZNF277Q9NRM2 450 aaPredicted RBP25.06■■□□□ 1.6
SNCA-203ENST00000394986 UBTFL1P0CB47 393 aaPredicted RBP25.05■■□□□ 1.6
SNCA-203ENST00000394986 TMC4Q7Z404 712 aa25.05■■□□□ 1.6
SNCA-203ENST00000394986 ANKRD44Q8N8A2 993 aa25.05■■□□□ 1.6
SNCA-203ENST00000394986 PANK1Q8TE04 598 aa25.03■■□□□ 1.6
SNCA-203ENST00000394986 PSMD1Q99460 953 aa25.03■■□□□ 1.6
SNCA-203ENST00000394986 LRRC37AA6NMS7 1700 aa25.03■■□□□ 1.6
SNCA-203ENST00000394986 ANKRD18BA2A2Z9 1011 aa25.03■■□□□ 1.6
SNCA-203ENST00000394986 GPSM2P81274 684 aa25.03■■□□□ 1.6
SNCA-203ENST00000394986 DPP8Q6V1X1 898 aaPredicted RBP25.03■■□□□ 1.6
SNCA-203ENST00000394986 MPNDQ8N594 471 aa25.03■■□□□ 1.6
SNCA-203ENST00000394986 IFIT5Q13325 482 aaKnown RBP25.02■■□□□ 1.6
SNCA-203ENST00000394986 RABL6Q3YEC7 729 aaPredicted RBP25.02■■□□□ 1.6
SNCA-203ENST00000394986 ZNF594Q96JF6 807 aaPredicted RBP25.02■■□□□ 1.6
SNCA-203ENST00000394986 IGHMBP2P38935 993 aaKnown RBP25.01■■□□□ 1.59
SNCA-203ENST00000394986 ITPRIPQ8IWB1 547 aa25.01■■□□□ 1.59
SNCA-203ENST00000394986 NSFL1CQ9UNZ2 370 aaKnown RBP25.01■■□□□ 1.59
SNCA-203ENST00000394986 LRRFIP2Q9Y608 721 aaKnown RBP25.01■■□□□ 1.59
SNCA-203ENST00000394986 DUOX1Q9NRD9 1551 aa25■■□□□ 1.59
SNCA-203ENST00000394986 SBF1O95248 1867 aa25■■□□□ 1.59
SNCA-203ENST00000394986 CCDC57Q2TAC2 916 aa25■■□□□ 1.59
SNCA-203ENST00000394986 GRIPAP1Q4V328 841 aa25■■□□□ 1.59
SNCA-203ENST00000394986 BSDC1Q9NW68 430 aaPredicted RBP25■■□□□ 1.59
SNCA-203ENST00000394986 IARSP41252 1262 aaKnown RBP24.99■■□□□ 1.59
SNCA-203ENST00000394986 SPEF2Q9C093 1822 aa24.98■■□□□ 1.59
SNCA-203ENST00000394986 GNAI3P08754 354 aa24.98■■□□□ 1.59
SNCA-203ENST00000394986 TAF7LQ5H9L4 462 aa24.98■■□□□ 1.59
SNCA-203ENST00000394986 GPR101Q96P66 508 aaPredicted RBP24.98■■□□□ 1.59
SNCA-203ENST00000394986 MPHOSPH8Q99549 860 aa24.98■■□□□ 1.59
SNCA-203ENST00000394986 RTFDC1Q9BY42 306 aaPredicted RBP24.98■■□□□ 1.59
SNCA-203ENST00000394986 COL4A5P29400 1685 aa24.97■■□□□ 1.59
SNCA-203ENST00000394986 POLLQ9UGP5 575 aa24.97■■□□□ 1.59
SNCA-203ENST00000394986 MINPP1Q9UNW1 487 aa24.97■■□□□ 1.59
SNCA-203ENST00000394986 AOC3Q16853 763 aa24.96■■□□□ 1.59
SNCA-203ENST00000394986 C20orf194Q5TEA3 1177 aa24.96■■□□□ 1.59
SNCA-203ENST00000394986 ZNF526Q8TF50 670 aaPredicted RBP24.96■■□□□ 1.59
SNCA-203ENST00000394986 ANKIB1Q9P2G1 1089 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms