RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 IFIT3O14879 490 aaKnown RBP19.73■□□□□ 0.75
SIN3A-203ENST00000394949 N4BP3O15049 544 aa19.73■□□□□ 0.75
SIN3A-203ENST00000394949 OPA1O60313 960 aa19.73■□□□□ 0.75
SIN3A-203ENST00000394949 MTIF2P46199 727 aaKnown RBP19.73■□□□□ 0.75
SIN3A-203ENST00000394949 TAOK3Q9H2K8 898 aa19.73■□□□□ 0.75
SIN3A-203ENST00000394949 NCOA7Q8NI08 942 aa19.73■□□□□ 0.75
SIN3A-203ENST00000394949 A0A087WZG4 1122 aa19.73■□□□□ 0.75
SIN3A-203ENST00000394949 IQCA1Q86XH1 822 aa19.73■□□□□ 0.75
SIN3A-203ENST00000394949 CCDC113Q9H0I3 377 aa19.73■□□□□ 0.75
SIN3A-203ENST00000394949 JADE2Q9NQC1 790 aa19.73■□□□□ 0.75
SIN3A-203ENST00000394949 CYLC1P35663 651 aaPredicted RBP19.72■□□□□ 0.75
SIN3A-203ENST00000394949 RMND1Q9NWS8 449 aa19.72■□□□□ 0.75
SIN3A-203ENST00000394949 IPO4Q8TEX9 1081 aaKnown RBP19.72■□□□□ 0.75
SIN3A-203ENST00000394949 TRMT112Q9UI30 125 aaKnown RBP19.72■□□□□ 0.75
SIN3A-203ENST00000394949 ARHGEF12Q9NZN5 1544 aa19.72■□□□□ 0.75
SIN3A-203ENST00000394949 AMPD3Q01432 767 aa19.72■□□□□ 0.75
SIN3A-203ENST00000394949 ATL3Q6DD88 541 aa19.72■□□□□ 0.75
SIN3A-203ENST00000394949 IFNL2Q8IZJ0 200 aa19.72■□□□□ 0.75
SIN3A-203ENST00000394949 ANKRD24Q8TF21 1146 aa19.72■□□□□ 0.75
SIN3A-203ENST00000394949 PUS7Q96PZ0 661 aaKnown RBP19.71■□□□□ 0.75
SIN3A-203ENST00000394949 TTC41PQ6P2S7 1318 aa19.71■□□□□ 0.75
SIN3A-203ENST00000394949 ZMYM4Q5VZL5 1548 aa19.71■□□□□ 0.75
SIN3A-203ENST00000394949 CTAGE9A4FU28 777 aa19.71■□□□□ 0.75
SIN3A-203ENST00000394949 METAP2P50579 478 aaKnown RBP eCLIP19.71■□□□□ 0.75
SIN3A-203ENST00000394949 FANCAO15360 1455 aa19.71■□□□□ 0.75
SIN3A-203ENST00000394949 MAATS1Q7Z4T9 603 aa19.71■□□□□ 0.75
SIN3A-203ENST00000394949 SPINK5Q9NQ38 1064 aaPredicted RBP19.71■□□□□ 0.75
SIN3A-203ENST00000394949 BCCIPQ9P287 314 aaKnown RBP eCLIP19.71■□□□□ 0.75
SIN3A-203ENST00000394949 SLC5A1P13866 664 aa19.71■□□□□ 0.75
SIN3A-203ENST00000394949 HSPA4P34932 840 aa19.71■□□□□ 0.75
SIN3A-203ENST00000394949 KRT28Q7Z3Y7 464 aa19.71■□□□□ 0.75
SIN3A-203ENST00000394949 EIF2AK4Q9P2K8 1649 aaKnown RBP19.71■□□□□ 0.74
SIN3A-203ENST00000394949 ANKRD18BA2A2Z9 1011 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 EXOC5O00471 708 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 ZNF76P36508 570 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 USP5P45974 858 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.7■□□□□ 0.74
SIN3A-203ENST00000394949 CEBPAP49715 358 aaPredicted RBP19.7■□□□□ 0.74
SIN3A-203ENST00000394949 AK2P54819 239 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 NBPF11Q86T75 865 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 MKNK2Q9HBH9 465 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 CCDC194A0A1B0GVG4 234 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 MINDY4BA8MYZ0 360 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 TTF1Q15361 905 aaPredicted RBP19.7■□□□□ 0.74
SIN3A-203ENST00000394949 TESK2Q96S53 571 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 RASSF4Q9H2L5 321 aa19.7■□□□□ 0.74
SIN3A-203ENST00000394949 RTL1A6NKG5 1358 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 PER1O15534 1290 aaPredicted RBP19.69■□□□□ 0.74
SIN3A-203ENST00000394949 LIG1P18858 919 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 NF2P35240 595 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 TMEM266Q2M3C6 531 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 CEP85Q6P2H3 762 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 EBAG9O00559 213 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 SEC63Q9UGP8 760 aaKnown RBP19.69■□□□□ 0.74
SIN3A-203ENST00000394949 IFI16Q16666 785 aaKnown RBP19.69■□□□□ 0.74
SIN3A-203ENST00000394949 CADPS2Q86UW7 1296 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 POTEJP0CG39 1038 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 ISM2Q6H9L7 571 aa19.69■□□□□ 0.74
SIN3A-203ENST00000394949 TTC31Q49AM3 519 aaPredicted RBP19.68■□□□□ 0.74
SIN3A-203ENST00000394949 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
SIN3A-203ENST00000394949 CATIPQ7Z7H3 387 aa19.68■□□□□ 0.74
SIN3A-203ENST00000394949 DHX37Q8IY37 1157 aaKnown RBP19.68■□□□□ 0.74
SIN3A-203ENST00000394949 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
SIN3A-203ENST00000394949 TCOF1Q13428 1488 aaKnown RBP19.68■□□□□ 0.74
SIN3A-203ENST00000394949 NLRP5P59047 1200 aa19.68■□□□□ 0.74
SIN3A-203ENST00000394949 MAP3K2Q9Y2U5 619 aa19.68■□□□□ 0.74
SIN3A-203ENST00000394949 PI4KAP2A4QPH2 592 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 FAM83GA6ND36 823 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 VAMP4O75379 141 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 TMEM67Q5HYA8 995 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 SYT10Q6XYQ8 523 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 TICAM2Q86XR7 235 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 PI4KAP1Q8N8J0 262 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 GOPCQ9HD26 462 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 ACEP12821 1306 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 ZNF500O60304 480 aaPredicted RBP19.67■□□□□ 0.74
SIN3A-203ENST00000394949 DZIP1Q86YF9 867 aaKnown RBP19.67■□□□□ 0.74
SIN3A-203ENST00000394949 PPP1R9BQ96SB3 815 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 TCP11L1Q9NUJ3 509 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■■□□□ 14
SIN3A-203ENST00000394949 RAD50Q92878 1312 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 CHMLP26374 656 aa19.67■□□□□ 0.74
SIN3A-203ENST00000394949 RIOK3O14730 519 aaKnown RBP19.66■□□□□ 0.74
SIN3A-203ENST00000394949 SPTLC2O15270 562 aa19.66■□□□□ 0.74
SIN3A-203ENST00000394949 ZFYP08048 801 aaPredicted RBP19.66■□□□□ 0.74
SIN3A-203ENST00000394949 IBSPP21815 317 aaPredicted RBP19.66■□□□□ 0.74
SIN3A-203ENST00000394949 AKR1B10O60218 316 aa19.66■□□□□ 0.74
SIN3A-203ENST00000394949 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
SIN3A-203ENST00000394949 KLF18A0A0U1RQI7 1052 aa19.66■□□□□ 0.74
SIN3A-203ENST00000394949 ALDH1L1O75891 902 aa19.66■□□□□ 0.74
SIN3A-203ENST00000394949 KRT83P78385 493 aa19.65■□□□□ 0.74
SIN3A-203ENST00000394949 HDXQ7Z353 690 aa19.65■□□□□ 0.74
SIN3A-203ENST00000394949 GSTTP1A0A1W2PQM5 241 aa19.65■□□□□ 0.74
SIN3A-203ENST00000394949 SLF2Q8IX21 1173 aa19.65■□□□□ 0.74
SIN3A-203ENST00000394949 TRIM21P19474 475 aaKnown RBP19.65■□□□□ 0.74
SIN3A-203ENST00000394949 LMOD1P29536 600 aaPredicted RBP19.65■□□□□ 0.74
SIN3A-203ENST00000394949 IRX3P78415 501 aaPredicted RBP19.65■□□□□ 0.74
SIN3A-203ENST00000394949 TUBB2AQ13885 445 aa19.65■□□□□ 0.74
SIN3A-203ENST00000394949 CRACR2BQ8N4Y2 399 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms