RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SEC62Q99442 399 aaKnown RBP23.37■■□□□ 1.33
RCCD1-201ENST00000394258 ARID3AQ99856 593 aa23.37■■□□□ 1.33
RCCD1-201ENST00000394258 ZCRB1Q8TBF4 217 aaKnown RBP23.37■■□□□ 1.33
RCCD1-201ENST00000394258 RABL6Q3YEC7 729 aaPredicted RBP23.36■■□□□ 1.33
RCCD1-201ENST00000394258 BRINP3Q76B58 766 aa23.36■■□□□ 1.33
RCCD1-201ENST00000394258 DDX46Q7L014 1031 aaKnown RBP23.36■■□□□ 1.33
RCCD1-201ENST00000394258 ZSCAN31Q96LW9 406 aaPredicted RBP23.36■■□□□ 1.33
RCCD1-201ENST00000394258 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
RCCD1-201ENST00000394258 BLOC1S2Q6QNY1 142 aa23.36■■□□□ 1.33
RCCD1-201ENST00000394258 SYAP1Q96A49 352 aaPredicted RBP23.36■■□□□ 1.33
RCCD1-201ENST00000394258 NEUROD6Q96NK8 337 aa23.36■■□□□ 1.33
RCCD1-201ENST00000394258 SH2B1Q9NRF2 756 aaPredicted RBP23.36■■□□□ 1.33
RCCD1-201ENST00000394258 STRN4Q9NRL3 753 aa23.36■■□□□ 1.33
RCCD1-201ENST00000394258 ATP5JP18859 108 aa23.36■■□□□ 1.33
RCCD1-201ENST00000394258 DNM1Q05193 864 aaKnown RBP23.36■■□□□ 1.33
RCCD1-201ENST00000394258 STK3Q13188 491 aa23.36■■□□□ 1.33
RCCD1-201ENST00000394258 RNF20Q5VTR2 975 aa23.36■■□□□ 1.33
RCCD1-201ENST00000394258 MPNDQ8N594 471 aa23.36■■□□□ 1.33
RCCD1-201ENST00000394258 MTMR6Q9Y217 621 aa23.35■■□□□ 1.33
RCCD1-201ENST00000394258 TAF5LO75529 589 aa23.35■■□□□ 1.33
RCCD1-201ENST00000394258 PSMA5P28066 241 aa23.35■■□□□ 1.33
RCCD1-201ENST00000394258 CASP7P55210 303 aa23.35■■□□□ 1.33
RCCD1-201ENST00000394258 SLFNL1Q499Z3 407 aa23.35■■□□□ 1.33
RCCD1-201ENST00000394258 NOL7Q9UMY1 257 aaKnown RBP23.34■■□□□ 1.33
RCCD1-201ENST00000394258 FERMT3Q86UX7 667 aa23.34■■□□□ 1.33
RCCD1-201ENST00000394258 MED23Q9ULK4 1368 aa23.34■■□□□ 1.33
RCCD1-201ENST00000394258 AFDNP55196 1824 aaKnown RBP23.33■■□□□ 1.33
RCCD1-201ENST00000394258 TIMM10P62072 90 aa23.33■■□□□ 1.33
RCCD1-201ENST00000394258 DCCP43146 1447 aa23.33■■□□□ 1.32
RCCD1-201ENST00000394258 ZNF594Q96JF6 807 aaPredicted RBP23.33■■□□□ 1.32
RCCD1-201ENST00000394258 COL15A1P39059 1388 aa23.32■■□□□ 1.32
RCCD1-201ENST00000394258 FOXO4P98177 505 aa23.32■■□□□ 1.32
RCCD1-201ENST00000394258 TMEM87AQ8NBN3 555 aa23.32■■□□□ 1.32
RCCD1-201ENST00000394258 SNRKQ9NRH2 765 aa23.32■■□□□ 1.32
RCCD1-201ENST00000394258 TPM2P07951 284 aa23.32■■□□□ 1.32
RCCD1-201ENST00000394258 LARP1BQ659C4 914 aaKnown RBP23.32■■□□□ 1.32
RCCD1-201ENST00000394258 MRC1P22897 1456 aa23.32■■□□□ 1.32
RCCD1-201ENST00000394258 WDR17Q8IZU2 1322 aa23.31■■□□□ 1.32
RCCD1-201ENST00000394258 PCDH11XQ9BZA7 1347 aa23.31■■□□□ 1.32
RCCD1-201ENST00000394258 PCDH11YQ9BZA8 1340 aa23.31■■□□□ 1.32
RCCD1-201ENST00000394258 RPS6KB1P23443 525 aa23.31■■□□□ 1.32
RCCD1-201ENST00000394258 FAM173BQ6P4H8 233 aa23.31■■□□□ 1.32
RCCD1-201ENST00000394258 ATP6V1DQ9Y5K8 247 aa23.31■■□□□ 1.32
RCCD1-201ENST00000394258 CPDO75976 1380 aa23.31■■□□□ 1.32
RCCD1-201ENST00000394258 CWC25Q9NXE8 425 aaPredicted RBP23.31■■□□□ 1.32
RCCD1-201ENST00000394258 H7C1W4 665 aa23.3■■□□□ 1.32
RCCD1-201ENST00000394258 HS1BP3Q53T59 392 aa23.3■■□□□ 1.32
RCCD1-201ENST00000394258 TOB2Q14106 344 aaPredicted RBP23.3■■□□□ 1.32
RCCD1-201ENST00000394258 PDCL3Q9H2J4 239 aa23.3■■□□□ 1.32
RCCD1-201ENST00000394258 FAM13BQ9NYF5 915 aa23.3■■□□□ 1.32
RCCD1-201ENST00000394258 OFD1O75665 1012 aa23.29■■□□□ 1.32
RCCD1-201ENST00000394258 UBE2HP62256 183 aa23.29■■□□□ 1.32
RCCD1-201ENST00000394258 LRRC24Q50LG9 513 aa23.29■■□□□ 1.32
RCCD1-201ENST00000394258 CCDC183Q5T5S1 534 aa23.29■■□□□ 1.32
RCCD1-201ENST00000394258 R3HCC1Q9Y3T6 440 aaKnown RBP23.29■■□□□ 1.32
RCCD1-201ENST00000394258 ARFGEF2Q9Y6D5 1785 aa23.29■■□□□ 1.32
RCCD1-201ENST00000394258 GOLIM4O00461 696 aa23.28■■□□□ 1.32
RCCD1-201ENST00000394258 CDC37L1Q7L3B6 337 aa23.28■■□□□ 1.32
RCCD1-201ENST00000394258 ATG9AQ7Z3C6 839 aa23.28■■□□□ 1.32
RCCD1-201ENST00000394258 HAUS7Q99871 368 aa23.28■■□□□ 1.32
RCCD1-201ENST00000394258 PHF14O94880 888 aa23.28■■□□□ 1.32
RCCD1-201ENST00000394258 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
RCCD1-201ENST00000394258 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
RCCD1-201ENST00000394258 ZKSCAN5Q9Y2L8 839 aa23.28■■□□□ 1.32
RCCD1-201ENST00000394258 ZNF609O15014 1411 aa23.28■■□□□ 1.32
RCCD1-201ENST00000394258 HCLS1P14317 486 aaPredicted RBP23.27■■□□□ 1.32
RCCD1-201ENST00000394258 GIMAP6Q6P9H5 292 aa23.27■■□□□ 1.32
RCCD1-201ENST00000394258 IL2RBP14784 551 aa23.26■■□□□ 1.31
RCCD1-201ENST00000394258 EVA1CP58658 441 aa23.26■■□□□ 1.31
RCCD1-201ENST00000394258 PKD1L3Q7Z443 1732 aa23.26■■□□□ 1.31
RCCD1-201ENST00000394258 MCMDC2Q4G0Z9 681 aa23.26■■□□□ 1.31
RCCD1-201ENST00000394258 USP25Q9UHP3 1055 aa23.26■■□□□ 1.31
RCCD1-201ENST00000394258 ERVV-2B6SEH9 535 aa23.26■■□□□ 1.31
RCCD1-201ENST00000394258 PUS3Q9BZE2 481 aaKnown RBP23.26■■□□□ 1.31
RCCD1-201ENST00000394258 HMG20BQ9P0W2 317 aa23.26■■□□□ 1.31
RCCD1-201ENST00000394258 CYP21A2P08686 494 aa23.25■■□□□ 1.31
RCCD1-201ENST00000394258 ANKRD1Q15327 319 aa23.25■■□□□ 1.31
RCCD1-201ENST00000394258 NEK1Q96PY6 1258 aa23.25■■□□□ 1.31
RCCD1-201ENST00000394258 PTMAP06454 111 aaKnown RBP23.25■■□□□ 1.31
RCCD1-201ENST00000394258 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
RCCD1-201ENST00000394258 CCDC39Q9UFE4 941 aa23.25■■□□□ 1.31
RCCD1-201ENST00000394258 USPL1Q5W0Q7 1092 aa23.24■■□□□ 1.31
RCCD1-201ENST00000394258 ZNF500O60304 480 aaPredicted RBP23.24■■□□□ 1.31
RCCD1-201ENST00000394258 KBTBD3Q8NAB2 608 aa23.24■■□□□ 1.31
RCCD1-201ENST00000394258 ZNF830Q96NB3 372 aaPredicted RBP23.24■■□□□ 1.31
RCCD1-201ENST00000394258 HSP90B1P14625 803 aaKnown RBP23.23■■□□□ 1.31
RCCD1-201ENST00000394258 JAK2O60674 1132 aa23.23■■□□□ 1.31
RCCD1-201ENST00000394258 Q6ZUG5 572 aa23.23■■□□□ 1.31
RCCD1-201ENST00000394258 PAG1Q9NWQ8 432 aa23.23■■□□□ 1.31
RCCD1-201ENST00000394258 TFIP11Q9UBB9 837 aaKnown RBP23.23■■□□□ 1.31
RCCD1-201ENST00000394258 FGD1P98174 961 aa23.22■■□□□ 1.31
RCCD1-201ENST00000394258 GLI3P10071 1580 aa23.22■■□□□ 1.31
RCCD1-201ENST00000394258 TSGA10IPQ3SY00 556 aa23.22■■□□□ 1.31
RCCD1-201ENST00000394258 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
RCCD1-201ENST00000394258 ABCC6O95255 1503 aa23.21■■□□□ 1.31
RCCD1-201ENST00000394258 A0A0G2JLW4 131 aa23.21■■□□□ 1.31
RCCD1-201ENST00000394258 CCDC191Q8NCU4 936 aa23.21■■□□□ 1.31
RCCD1-201ENST00000394258 U3KPZ7 1027 aaPredicted RBP23.21■■□□□ 1.31
RCCD1-201ENST00000394258 JCADQ9P266 1359 aa23.21■■□□□ 1.31
RCCD1-201ENST00000394258 EYA2O00167 538 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms