RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SLC10A5Q5PT55 438 aa30.15■■■□□ 2.42
LRFN4-202ENST00000393952 SKAP1Q86WV1 359 aa30.15■■■□□ 2.42
LRFN4-202ENST00000393952 CNBD1Q8NA66 436 aa30.15■■■□□ 2.42
LRFN4-202ENST00000393952 KLHDC4Q8TBB5 520 aa30.15■■■□□ 2.42
LRFN4-202ENST00000393952 APBB1O00213 710 aa30.14■■■□□ 2.42
LRFN4-202ENST00000393952 NPHP1O15259 732 aa30.14■■■□□ 2.42
LRFN4-202ENST00000393952 PRR5LQ6MZQ0 368 aa30.13■■■□□ 2.41
LRFN4-202ENST00000393952 GREM2Q9H772 168 aa30.13■■■□□ 2.41
LRFN4-202ENST00000393952 MMP10P09238 476 aa30.12■■■□□ 2.41
LRFN4-202ENST00000393952 PTPN12Q05209 780 aaKnown RBP30.12■■■□□ 2.41
LRFN4-202ENST00000393952 ANKRD45Q5TZF3 282 aa30.12■■■□□ 2.41
LRFN4-202ENST00000393952 C3orf67Q6ZVT6 689 aa30.12■■■□□ 2.41
LRFN4-202ENST00000393952 NOP58Q9Y2X3 529 aaKnown RBP30.12■■■□□ 2.41
LRFN4-202ENST00000393952 NUCB1Q02818 461 aa30.11■■■□□ 2.41
LRFN4-202ENST00000393952 COPRSQ9NQ92 184 aa30.11■■■□□ 2.41
LRFN4-202ENST00000393952 TNRC6CQ9HCJ0 1690 aaKnown RBP30.11■■■□□ 2.41
LRFN4-202ENST00000393952 CCDC57Q2TAC2 916 aa30.11■■■□□ 2.41
LRFN4-202ENST00000393952 SIL1Q9H173 461 aa30.1■■■□□ 2.41
LRFN4-202ENST00000393952 NRXN2Q9P2S2 1712 aa30.1■■■□□ 2.41
LRFN4-202ENST00000393952 IFIT5Q13325 482 aaKnown RBP30.09■■■□□ 2.41
LRFN4-202ENST00000393952 ITGA6P23229 1130 aa30.08■■■□□ 2.41
LRFN4-202ENST00000393952 CCDC152Q4G0S7 254 aa30.08■■■□□ 2.41
LRFN4-202ENST00000393952 ZNF594Q96JF6 807 aaPredicted RBP30.08■■■□□ 2.41
LRFN4-202ENST00000393952 LNPKQ9C0E8 428 aa30.08■■■□□ 2.41
LRFN4-202ENST00000393952 SMARCA5O60264 1052 aaPredicted RBP30.07■■■□□ 2.4
LRFN4-202ENST00000393952 OS9Q13438 667 aaPredicted RBP30.07■■■□□ 2.4
LRFN4-202ENST00000393952 SF3B3Q15393 1217 aaKnown RBP30.07■■■□□ 2.4
LRFN4-202ENST00000393952 HSP90AB4PQ58FF6 505 aa30.07■■■□□ 2.4
LRFN4-202ENST00000393952 CHD1LQ86WJ1 897 aa30.07■■■□□ 2.4
LRFN4-202ENST00000393952 PARP3Q9Y6F1 533 aa30.07■■■□□ 2.4
LRFN4-202ENST00000393952 RIC1Q4ADV7 1423 aa30.07■■■□□ 2.4
LRFN4-202ENST00000393952 RAB11FIP3O75154 756 aa30.07■■■□□ 2.4
LRFN4-202ENST00000393952 ST5P78524 1137 aa30.07■■■□□ 2.4
LRFN4-202ENST00000393952 NLRP3Q96P20 1036 aa30.07■■■□□ 2.4
LRFN4-202ENST00000393952 ANKRD18BA2A2Z9 1011 aa30.06■■■□□ 2.4
LRFN4-202ENST00000393952 G3BP1Q13283 466 aaKnown RBP eCLIP30.06■■■□□ 2.4
LRFN4-202ENST00000393952 RTL9Q8NET4 1388 aa30.06■■■□□ 2.4
LRFN4-202ENST00000393952 R3HDM1Q15032 1099 aaKnown RBP30.05■■■□□ 2.4
LRFN4-202ENST00000393952 SLC16A10Q8TF71 515 aa30.05■■■□□ 2.4
LRFN4-202ENST00000393952 LRRCC1Q9C099 1032 aa30.05■■■□□ 2.4
LRFN4-202ENST00000393952 TAF7LQ5H9L4 462 aa30.04■■■□□ 2.4
LRFN4-202ENST00000393952 BCL11AQ9H165 835 aa30.04■■■□□ 2.4
LRFN4-202ENST00000393952 SEC31BQ9NQW1 1179 aa30.04■■■□□ 2.4
LRFN4-202ENST00000393952 RHPN1Q8TCX5 695 aa30.03■■■□□ 2.4
LRFN4-202ENST00000393952 ZBTB47Q9UFB7 747 aaPredicted RBP30.03■■■□□ 2.4
LRFN4-202ENST00000393952 PDE4AP27815 886 aa30.03■■■□□ 2.4
LRFN4-202ENST00000393952 ANKRD31Q8N7Z5 1873 aa30.02■■■□□ 2.4
LRFN4-202ENST00000393952 ERC1Q8IUD2 1116 aa30.02■■■□□ 2.4
LRFN4-202ENST00000393952 KIF1BPQ96EK5 621 aa30.02■■■□□ 2.4
LRFN4-202ENST00000393952 PUS3Q9BZE2 481 aaKnown RBP30.02■■■□□ 2.4
LRFN4-202ENST00000393952 TAF1P21675 1872 aa30.01■■■□□ 2.39
LRFN4-202ENST00000393952 SASH1O94885 1247 aa30.01■■■□□ 2.39
LRFN4-202ENST00000393952 RGS3P49796 1198 aa30.01■■■□□ 2.39
LRFN4-202ENST00000393952 IL1RAPL2Q9NP60 686 aa30.01■■■□□ 2.39
LRFN4-202ENST00000393952 COL4A1P02462 1669 aa30■■■□□ 2.39
LRFN4-202ENST00000393952 EYA2O00167 538 aa30■■■□□ 2.39
LRFN4-202ENST00000393952 LRRC24Q50LG9 513 aa30■■■□□ 2.39
LRFN4-202ENST00000393952 ATG9AQ7Z3C6 839 aa30■■■□□ 2.39
LRFN4-202ENST00000393952 LRP5O75197 1615 aa30■■■□□ 2.39
LRFN4-202ENST00000393952 SPEF2Q9C093 1822 aa30■■■□□ 2.39
LRFN4-202ENST00000393952 CIAO1O76071 339 aa29.98■■■□□ 2.39
LRFN4-202ENST00000393952 PSDA5PKW4 1024 aaPredicted RBP29.98■■■□□ 2.39
LRFN4-202ENST00000393952 C16orf71Q8IYS4 520 aaPredicted RBP29.98■■■□□ 2.39
LRFN4-202ENST00000393952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.98■■■□□ 2.39
LRFN4-202ENST00000393952 ZBTB7AO95365 584 aa29.97■■■□□ 2.39
LRFN4-202ENST00000393952 BRIP1Q9BX63 1249 aa29.97■■■□□ 2.39
LRFN4-202ENST00000393952 FBXO3Q9UK99 471 aa29.97■■■□□ 2.39
LRFN4-202ENST00000393952 IL15P40933 162 aaPredicted RBP29.96■■■□□ 2.39
LRFN4-202ENST00000393952 LDHAL6AQ6ZMR3 332 aa29.96■■■□□ 2.39
LRFN4-202ENST00000393952 CDC5LQ99459 802 aaKnown RBP29.95■■■□□ 2.39
LRFN4-202ENST00000393952 TFCP2Q12800 502 aa29.94■■■□□ 2.38
LRFN4-202ENST00000393952 CRY2Q49AN0 593 aa29.94■■■□□ 2.38
LRFN4-202ENST00000393952 OTUD7AQ8TE49 926 aaPredicted RBP29.94■■■□□ 2.38
LRFN4-202ENST00000393952 CNNM1Q9NRU3 951 aa29.94■■■□□ 2.38
LRFN4-202ENST00000393952 IGHMBP2P38935 993 aaKnown RBP29.94■■■□□ 2.38
LRFN4-202ENST00000393952 DDX46Q7L014 1031 aaKnown RBP29.94■■■□□ 2.38
LRFN4-202ENST00000393952 RIPOR2Q9Y4F9 1068 aa29.94■■■□□ 2.38
LRFN4-202ENST00000393952 KLRG2A4D1S0 409 aaPredicted RBP29.93■■■□□ 2.38
LRFN4-202ENST00000393952 CELF1Q92879 486 aaKnown RBP29.93■■■□□ 2.38
LRFN4-202ENST00000393952 ANKRD18AQ8IVF6 992 aa29.92■■■□□ 2.38
LRFN4-202ENST00000393952 RPGRQ92834 1020 aaKnown RBP29.92■■■□□ 2.38
LRFN4-202ENST00000393952 MPHOSPH8Q99549 860 aa29.92■■■□□ 2.38
LRFN4-202ENST00000393952 MTFR1LQ9H019 292 aa29.92■■■□□ 2.38
LRFN4-202ENST00000393952 ATF5Q9Y2D1 282 aaPredicted RBP29.92■■■□□ 2.38
LRFN4-202ENST00000393952 CLASRPQ8N2M8 674 aaKnown RBP29.91■■■□□ 2.38
LRFN4-202ENST00000393952 COL11A2P13942 1736 aaPredicted RBP29.9■■■□□ 2.38
LRFN4-202ENST00000393952 PDE6BP35913 854 aa29.89■■■□□ 2.38
LRFN4-202ENST00000393952 RPS8P62241 208 aaKnown RBP29.89■■■□□ 2.38
LRFN4-202ENST00000393952 PLEKHM2Q8IWE5 1019 aa29.89■■■□□ 2.38
LRFN4-202ENST00000393952 CEP126Q9P2H0 1117 aa29.89■■■□□ 2.38
LRFN4-202ENST00000393952 METTL24Q5JXM2 366 aa29.88■■■□□ 2.37
LRFN4-202ENST00000393952 AACSQ86V21 672 aa29.88■■■□□ 2.37
LRFN4-202ENST00000393952 EAF2Q96CJ1 260 aaPredicted RBP29.88■■■□□ 2.37
LRFN4-202ENST00000393952 SALL3Q9BXA9 1300 aa29.87■■■□□ 2.37
LRFN4-202ENST00000393952 HOXA10P31260 410 aaPredicted RBP29.87■■■□□ 2.37
LRFN4-202ENST00000393952 GRAPQ13588 217 aa29.87■■■□□ 2.37
LRFN4-202ENST00000393952 TNNI3KQ59H18 835 aa29.87■■■□□ 2.37
LRFN4-202ENST00000393952 GRAPLQ8TC17 118 aaPredicted RBP29.87■■■□□ 2.37
LRFN4-202ENST00000393952 RBM17Q96I25 401 aaKnown RBP29.87■■■□□ 2.37
LRFN4-202ENST00000393952 FPGT-TNNI3KV9GXZ4 949 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms