RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 JMYQ8N9B5 988 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 ZNF592Q92610 1267 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 USP21Q9UK80 565 aa19.4■□□□□ 0.7
SNX9-201ENST00000392185 ITGA6P23229 1130 aa19.39■□□□□ 0.69
SNX9-201ENST00000392185 C8orf76Q96K31 380 aa19.39■□□□□ 0.69
SNX9-201ENST00000392185 CDCA7Q9BWT1 371 aaPredicted RBP19.39■□□□□ 0.69
SNX9-201ENST00000392185 EDC3Q96F86 508 aaKnown RBP19.39■□□□□ 0.69
SNX9-201ENST00000392185 CFAP45Q9UL16 551 aa19.39■□□□□ 0.69
SNX9-201ENST00000392185 IQCA1Q86XH1 822 aa19.38■□□□□ 0.69
SNX9-201ENST00000392185 USP26Q9BXU7 913 aa19.38■□□□□ 0.69
SNX9-201ENST00000392185 MPHOSPH10O00566 681 aaKnown RBP19.38■□□□□ 0.69
SNX9-201ENST00000392185 CAMK4Q16566 473 aa19.38■□□□□ 0.69
SNX9-201ENST00000392185 BEND3Q5T5X7 828 aa19.38■□□□□ 0.69
SNX9-201ENST00000392185 SLC12A7Q9Y666 1083 aa19.38■□□□□ 0.69
SNX9-201ENST00000392185 TSR1Q2NL82 804 aaKnown RBP19.37■□□□□ 0.69
SNX9-201ENST00000392185 TNNI3KQ59H18 835 aa19.37■□□□□ 0.69
SNX9-201ENST00000392185 CCDC129Q6ZRS4 1044 aa19.37■□□□□ 0.69
SNX9-201ENST00000392185 FPGT-TNNI3KV9GXZ4 949 aa19.37■□□□□ 0.69
SNX9-201ENST00000392185 F8W031 263 aaPredicted RBP19.36■□□□□ 0.69
SNX9-201ENST00000392185 STX6O43752 255 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 TMEM67Q5HYA8 995 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 MIGA1Q8NAN2 632 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 CARD10Q9BWT7 1032 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 CDK12Q9NYV4 1490 aaPredicted RBP19.36■□□□□ 0.69
SNX9-201ENST00000392185 BAG4O95429 457 aaKnown RBP19.36■□□□□ 0.69
SNX9-201ENST00000392185 OLFM4Q6UX06 510 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 ZGPATQ8N5A5 531 aaKnown RBP19.36■□□□□ 0.69
SNX9-201ENST00000392185 GRPEL1Q9HAV7 217 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 CCDC87Q9NVE4 849 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 GOLGA8AA7E2F4 631 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 KCNQ4P56696 695 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 WDR17Q8IZU2 1322 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 ZFYP08048 801 aaPredicted RBP19.36■□□□□ 0.69
SNX9-201ENST00000392185 SOGA3Q5TF21 947 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 ZNF444Q8N0Y2 327 aaPredicted RBP19.36■□□□□ 0.69
SNX9-201ENST00000392185 FAM227BQ96M60 508 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 HMG20BQ9P0W2 317 aa19.36■□□□□ 0.69
SNX9-201ENST00000392185 TAF5LO75529 589 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 TPM3P06753 285 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 TPM1P09493 284 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 CRACR2BQ8N4Y2 399 aaPredicted RBP19.35■□□□□ 0.69
SNX9-201ENST00000392185 SPC24Q8NBT2 197 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 ANKRD20A12PQ8NF67 263 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 ST5P78524 1137 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 NCOA7Q8NI08 942 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 ORC3Q9UBD5 711 aaPredicted RBP19.35■□□□□ 0.69
SNX9-201ENST00000392185 CCDC192P0DO97 292 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 MFSD6Q6ZSS7 791 aa19.35■□□□□ 0.69
SNX9-201ENST00000392185 CCDC43Q96MW1 224 aaKnown RBP19.35■□□□□ 0.69
SNX9-201ENST00000392185 CTCFLQ8NI51 663 aaPredicted RBP19.34■□□□□ 0.69
SNX9-201ENST00000392185 SSH3Q8TE77 659 aa19.34■□□□□ 0.69
SNX9-201ENST00000392185 NAT10Q9H0A0 1025 aaKnown RBP19.34■□□□□ 0.69
SNX9-201ENST00000392185 NUP62CLQ9H1M0 184 aa19.34■□□□□ 0.69
SNX9-201ENST00000392185 CAMSAP1Q5T5Y3 1602 aa19.34■□□□□ 0.69
SNX9-201ENST00000392185 TULP4Q9NRJ4 1543 aa19.34■□□□□ 0.69
SNX9-201ENST00000392185 KLF18A0A0U1RQI7 1052 aa19.34■□□□□ 0.69
SNX9-201ENST00000392185 RNF41Q9H4P4 317 aaPredicted RBP19.34■□□□□ 0.69
SNX9-201ENST00000392185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.34■□□□□ 0.692e-7■■□□□ 11.4
SNX9-201ENST00000392185 SLC4A4Q9Y6R1 1079 aa19.34■□□□□ 0.69
SNX9-201ENST00000392185 TCIRG1Q13488 830 aa19.34■□□□□ 0.69
SNX9-201ENST00000392185 ANO8Q9HCE9 1232 aaPredicted RBP19.34■□□□□ 0.69
SNX9-201ENST00000392185 CLTCQ00610 1675 aaKnown RBP19.34■□□□□ 0.69
SNX9-201ENST00000392185 PDE4CQ08493 712 aa19.33■□□□□ 0.69
SNX9-201ENST00000392185 TRAPPC3LQ5T215 181 aa19.33■□□□□ 0.69
SNX9-201ENST00000392185 SPATA31A3Q5VYP0 1347 aa19.33■□□□□ 0.69
SNX9-201ENST00000392185 ANAPC15P60006 121 aa19.33■□□□□ 0.69
SNX9-201ENST00000392185 CREB3L3Q68CJ9 461 aa19.33■□□□□ 0.69
SNX9-201ENST00000392185 TMOD2Q9NZR1 351 aa19.33■□□□□ 0.69
SNX9-201ENST00000392185 CYP27B1O15528 508 aa19.33■□□□□ 0.68
SNX9-201ENST00000392185 LETM1O95202 739 aaPredicted RBP19.33■□□□□ 0.68
SNX9-201ENST00000392185 HMGN5P82970 282 aaKnown RBP19.33■□□□□ 0.68
SNX9-201ENST00000392185 TSPY2A6NKD2 308 aa19.33■□□□□ 0.68
SNX9-201ENST00000392185 GSPT1P15170 499 aaKnown RBP19.33■□□□□ 0.68
SNX9-201ENST00000392185 HMGB2P26583 209 aaKnown RBP19.33■□□□□ 0.68
SNX9-201ENST00000392185 NAA16Q6N069 864 aaPredicted RBP19.33■□□□□ 0.68
SNX9-201ENST00000392185 EAF2Q96CJ1 260 aaPredicted RBP19.33■□□□□ 0.68
SNX9-201ENST00000392185 AK2P54819 239 aa19.32■□□□□ 0.68
SNX9-201ENST00000392185 RNF113AO15541 343 aaKnown RBP19.32■□□□□ 0.68
SNX9-201ENST00000392185 MCM5P33992 734 aa19.32■□□□□ 0.68
SNX9-201ENST00000392185 Q6ZUG5 572 aa19.32■□□□□ 0.68
SNX9-201ENST00000392185 CCAR2Q8N163 923 aaKnown RBP19.32■□□□□ 0.68
SNX9-201ENST00000392185 TPM2P07951 284 aa19.32■□□□□ 0.68
SNX9-201ENST00000392185 TXLNAP40222 546 aa19.32■□□□□ 0.68
SNX9-201ENST00000392185 SMC2O95347 1197 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 ADGRL3Q9HAR2 1447 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 PDE8AO60658 829 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 MAGEB6Q8N7X4 407 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 XAGE2Q96GT9 111 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 STX8Q9UNK0 236 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 CCDC196A0A1B0GTZ2 297 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 PDILTQ8N807 584 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 ZBTB1Q9Y2K1 713 aa19.31■□□□□ 0.68
SNX9-201ENST00000392185 CCDC171Q6TFL3 1326 aa19.3■□□□□ 0.68
SNX9-201ENST00000392185 LDHCP07864 332 aa19.3■□□□□ 0.68
SNX9-201ENST00000392185 BRPF1P55201 1214 aaPredicted RBP19.3■□□□□ 0.68
SNX9-201ENST00000392185 NYXQ9GZU5 481 aa19.3■□□□□ 0.68
SNX9-201ENST00000392185 IARSP41252 1262 aaKnown RBP19.3■□□□□ 0.68
SNX9-201ENST00000392185 CDK5RAP3Q96JB5 506 aa19.3■□□□□ 0.68
SNX9-201ENST00000392185 SCAND2PQ9GZW5 306 aaPredicted RBP19.3■□□□□ 0.68
SNX9-201ENST00000392185 NOL7Q9UMY1 257 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms