RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SMC1AQ14683 1233 aaKnown RBP22.64■■□□□ 1.21
SHANK1-203ENST00000391813 ZSWIM4Q9H7M6 989 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 MIS18AQ9NYP9 233 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 INSRP06213 1382 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 ASXL1Q8IXJ9 1541 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 YEATS2Q9ULM3 1422 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 EZRP15311 586 aaKnown RBP22.64■■□□□ 1.21
SHANK1-203ENST00000391813 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.64■■□□□ 1.21
SHANK1-203ENST00000391813 NF2P35240 595 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 DNM1Q05193 864 aaKnown RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 KCNG4Q8TDN1 519 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 ZBTB40Q9NUA8 1239 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 ABCC1P33527 1531 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 SNRPA1P09661 255 aaKnown RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 NEK1Q96PY6 1258 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 POLR3AO14802 1390 aaPredicted RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 EBAG9O00559 213 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 IL2RBP14784 551 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 ZGPATQ8N5A5 531 aaKnown RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 MRPS27Q92552 414 aaKnown RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 MYO5CQ9NQX4 1742 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 FGFR1OPO95684 399 aaKnown RBP22.62■■□□□ 1.21
SHANK1-203ENST00000391813 PZPP20742 1482 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 RLBP1P12271 317 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 FLIIQ13045 1269 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 SOGA3Q5TF21 947 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 SPECC1LQ69YQ0 1117 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 DCTPP1Q9H773 170 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 AKAP2Q9Y2D5 859 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 RIOK3O14730 519 aaKnown RBP22.61■■□□□ 1.21
SHANK1-203ENST00000391813 SYT1P21579 422 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 PYM1Q9BRP8 204 aaKnown RBP22.61■■□□□ 1.21
SHANK1-203ENST00000391813 PIK3C2GO75747 1445 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 SPECC1Q5M775 1068 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 TDO2P48775 406 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 TMX1Q9H3N1 280 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 MTMR7Q9Y216 660 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 GCOM1H8Y6P7 765 aaPredicted RBP22.6■■□□□ 1.21
SHANK1-203ENST00000391813 MYZAPP0CAP1 466 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 HSPA4P34932 840 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 CACNA2D4Q7Z3S7 1137 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 USP26Q9BXU7 913 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 MBIPQ9NS73 344 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 VPS36Q86VN1 386 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 OPA1O60313 960 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 HSF2BPO75031 334 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 GIGYF2Q6Y7W6 1299 aaKnown RBP22.6■■□□□ 1.21
SHANK1-203ENST00000391813 NBPF11Q86T75 865 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 IBSPP21815 317 aaPredicted RBP22.59■■□□□ 1.21
SHANK1-203ENST00000391813 TICAM2Q86XR7 235 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 AOPEPQ8N6M6 819 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 CTAGE1Q96RT6 745 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 AKAP4Q5JQC9 854 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 C10orf67Q8IYJ2 551 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 GOLGA8BA8MQT2 603 aa22.58■■□□□ 1.21
SHANK1-203ENST00000391813 SYKP43405 635 aa22.58■■□□□ 1.21
SHANK1-203ENST00000391813 TRMT112Q9UI30 125 aaKnown RBP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 IFIT1P09914 478 aaKnown RBP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 ORC3Q9UBD5 711 aaPredicted RBP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 A0A1B0GUL7 405 aa22.58■■□□□ 1.21
SHANK1-203ENST00000391813 GBP2P32456 591 aaPredicted RBP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 HLTFQ14527 1009 aaKnown RBP eCLIP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 MICALL1Q8N3F8 863 aa22.58■■□□□ 1.21
SHANK1-203ENST00000391813 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 CCT2P78371 535 aaKnown RBP22.58■■□□□ 1.2
SHANK1-203ENST00000391813 SPAG1Q07617 926 aa22.58■■□□□ 1.2
SHANK1-203ENST00000391813 MYD88Q99836 296 aa22.58■■□□□ 1.2
SHANK1-203ENST00000391813 U2AF2P26368 475 aaKnown RBP eCLIP22.57■■□□□ 1.2
SHANK1-203ENST00000391813 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 SLAIN2Q9P270 581 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 CCDC91Q7Z6B0 441 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 DHX37Q8IY37 1157 aaKnown RBP22.57■■□□□ 1.2
SHANK1-203ENST00000391813 AIDAQ96BJ3 306 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 TMOD2Q9NZR1 351 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 NECAB1Q8N987 351 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 RHPN1Q8TCX5 695 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 TESK2Q96S53 571 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
SHANK1-203ENST00000391813 ZHX3Q9H4I2 956 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 MBD5Q9P267 1494 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 ZFYVE9O95405 1425 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 METTL24Q5JXM2 366 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 SYT10Q6XYQ8 523 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 IP6K1Q92551 441 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 USP16Q9Y5T5 823 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 CTAGE9A4FU28 777 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 IFIT5Q13325 482 aaKnown RBP22.55■■□□□ 1.2
SHANK1-203ENST00000391813 JADE2Q9NQC1 790 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 PPP1R42Q7Z4L9 355 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.55■■□□□ 1.2
SHANK1-203ENST00000391813 PLEKHM2Q8IWE5 1019 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 CABLES1Q8TDN4 633 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 CCDC113Q9H0I3 377 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 ANKRD62A6NC57 917 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 ZNF213O14771 459 aa22.54■■□□□ 1.2
SHANK1-203ENST00000391813 N4BP3O15049 544 aa22.54■■□□□ 1.2
SHANK1-203ENST00000391813 LIG1P18858 919 aa22.54■■□□□ 1.2
SHANK1-203ENST00000391813 RFC4P35249 363 aa22.54■■□□□ 1.2
SHANK1-203ENST00000391813 MRPL50Q8N5N7 158 aaKnown RBP22.54■■□□□ 1.2
SHANK1-203ENST00000391813 RPGRQ92834 1020 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms