RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 LAMC1P11047 1609 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 MADDQ8WXG6 1647 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 SCO2A0A1W2PP80 73 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 GNB5O14775 395 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 TRAK2O60296 914 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 NEFMP07197 916 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 HSP90AA1P07900 732 aaKnown RBP3.46□□□□□ -1.86
TRAV41-201ENST00000390468 HSP90B1P14625 803 aaKnown RBP3.46□□□□□ -1.86
TRAV41-201ENST00000390468 CDK11BP21127 795 aaKnown RBP3.46□□□□□ -1.86
TRAV41-201ENST00000390468 CHRNA4P43681 627 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 NR1H3Q13133 447 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 TLR1Q15399 786 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 TMEM259Q4ZIN3 620 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 WDR44Q5JSH3 913 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 CD163Q86VB7 1156 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 AIDAQ96BJ3 306 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 GJD4Q96KN9 370 aaPredicted RBP3.46□□□□□ -1.86
TRAV41-201ENST00000390468 SIN3AQ96ST3 1273 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 BCCIPQ9P287 314 aaKnown RBP eCLIP3.46□□□□□ -1.86
TRAV41-201ENST00000390468 ATXN7L1Q9ULK2 861 aaPredicted RBP3.46□□□□□ -1.86
TRAV41-201ENST00000390468 DHX29Q7Z478 1369 aaKnown RBP3.46□□□□□ -1.86
TRAV41-201ENST00000390468 NEURL4Q96JN8 1562 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 KDM5AP29375 1690 aaKnown RBP3.46□□□□□ -1.86
TRAV41-201ENST00000390468 IQGAP1P46940 1657 aa3.46□□□□□ -1.86
TRAV41-201ENST00000390468 CCDC144AA2RUR9 1427 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 DCDC2BA2VCK2 349 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 BNIP3LO60238 219 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 GNRH1P01148 92 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 CANXP27824 592 aaKnown RBP3.45□□□□□ -1.86
TRAV41-201ENST00000390468 OXLD1Q5BKU9 147 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 ZMYM1Q5SVZ6 1142 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 SLCO4C1Q6ZQN7 724 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 TBC1D9Q6ZT07 1266 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 CCDC125Q86Z20 511 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 RNF135Q8IUD6 432 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 BTBD6Q96KE9 485 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 PSMG3-AS1Q96PY0 264 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 ANKRD30BQ9BXX2 1392 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 ATP10AO60312 1499 aa3.45□□□□□ -1.86
TRAV41-201ENST00000390468 ARID4BQ4LE39 1312 aaPredicted RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 YEATS2Q9ULM3 1422 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 AGLP35573 1532 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 UBR1Q8IWV7 1749 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 QRICH2Q9H0J4 1663 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 SYNMO15061 1565 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 PIK3R2O00459 728 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 KHNYNO15037 678 aaKnown RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 KIF3BO15066 747 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 RAPGEF3O95398 923 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 HMGB1P09429 215 aaKnown RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 EPXP11678 715 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 CD33P20138 364 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 ESCO1Q5FWF5 840 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 ARSJQ5FYB0 599 aaPredicted RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 LINC00114Q6XXX2 140 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 CHSY3Q70JA7 882 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 ALYREFQ86V81 257 aaKnown RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 IPO4Q8TEX9 1081 aaKnown RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 ANP32BQ92688 251 aaKnown RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 CCDC85AQ96PX6 553 aaPredicted RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 CHMP4AQ9BY43 222 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 NOP53Q9NZM5 478 aaKnown RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 NAP1L2Q9ULW6 460 aaPredicted RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 DOLKQ9UPQ8 538 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 ARHGEF28Q8N1W1 1705 aaKnown RBP3.44□□□□□ -1.86
TRAV41-201ENST00000390468 ADGRB3O60242 1522 aa3.44□□□□□ -1.86
TRAV41-201ENST00000390468 UGGT1Q9NYU2 1555 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 ATXN7O15265 892 aaPredicted RBP3.43□□□□□ -1.86
TRAV41-201ENST00000390468 PPM1GO15355 546 aaPredicted RBP3.43□□□□□ -1.86
TRAV41-201ENST00000390468 HOXB4P17483 251 aaPredicted RBP3.43□□□□□ -1.86
TRAV41-201ENST00000390468 DGKGP49619 791 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 PCBP4P57723 403 aaKnown RBP3.43□□□□□ -1.86
TRAV41-201ENST00000390468 CALD1Q05682 793 aaKnown RBP3.43□□□□□ -1.86
TRAV41-201ENST00000390468 FLIIQ13045 1269 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 UBAP2LQ14157 1087 aaKnown RBP3.43□□□□□ -1.86
TRAV41-201ENST00000390468 TSGA10IPQ3SY00 556 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 RHBDD1Q8TEB9 315 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 ZNF592Q92610 1267 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 XAGE2Q96GT9 111 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 ZCCHC2Q9C0B9 1178 aaKnown RBP3.43□□□□□ -1.86
TRAV41-201ENST00000390468 FHDC1Q9C0D6 1143 aaPredicted RBP3.43□□□□□ -1.86
TRAV41-201ENST00000390468 ETNK1Q9HBU6 452 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 GJA3Q9Y6H8 435 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 NDUFB9Q9Y6M9 179 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 TMEM131LA2VDJ0 1609 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 MYO3AQ8NEV4 1616 aa3.43□□□□□ -1.86
TRAV41-201ENST00000390468 RALGAPBQ86X10 1494 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 SETD1AO15047 1707 aaKnown RBP3.42□□□□□ -1.86
TRAV41-201ENST00000390468 ARAFP10398 606 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 ADH6P28332 368 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 GATA4P43694 442 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 TNNT2P45379 298 aaPredicted RBP3.42□□□□□ -1.86
TRAV41-201ENST00000390468 MCCD1P59942 119 aaPredicted RBP3.42□□□□□ -1.86
TRAV41-201ENST00000390468 LBRQ14739 615 aaKnown RBP3.42□□□□□ -1.86
TRAV41-201ENST00000390468 GGT6Q6P531 493 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 FIGNL1Q6PIW4 674 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 ARID3AQ99856 593 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 PLVAPQ9BX97 442 aa3.42□□□□□ -1.86
TRAV41-201ENST00000390468 CEP126Q9P2H0 1117 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms