RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 CACNA2D4Q7Z3S7 1137 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 GOPCQ9HD26 462 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 TSPY2A6NKD2 308 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 ATP2C2O75185 946 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 CHMLP26374 656 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 MCM6Q14566 821 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 CRACR2BQ8N4Y2 399 aaPredicted RBP5.77□□□□□ -1.49
LTN1-202ENST00000389194 ALG1Q9BT22 464 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 MAPK8IP1Q9UQF2 711 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 NBPF7P0C2Y1 421 aaPredicted RBP5.77□□□□□ -1.49
LTN1-202ENST00000389194 PRPF4BQ13523 1007 aaKnown RBP5.77□□□□□ -1.49
LTN1-202ENST00000389194 DCTPP1Q9H773 170 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 CCDC178Q5BJE1 867 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 ZNF444Q8N0Y2 327 aaPredicted RBP5.77□□□□□ -1.49
LTN1-202ENST00000389194 CCDC12Q8WUD4 166 aaPredicted RBP5.77□□□□□ -1.49
LTN1-202ENST00000389194 FAM89AQ96GI7 184 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 MYL10Q9BUA6 226 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.77□□□□□ -1.49
LTN1-202ENST00000389194 A0A087WWV3 80 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 MYCNP04198 464 aaPredicted RBP5.77□□□□□ -1.49
LTN1-202ENST00000389194 SYT1P21579 422 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 SYKP43405 635 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 HSPA2P54652 639 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 UBASH3AP57075 661 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 CREB3L3Q68CJ9 461 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 CWC15Q9P013 229 aaKnown RBP5.77□□□□□ -1.49
LTN1-202ENST00000389194 PIK3R4Q99570 1358 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 KDM5BQ9UGL1 1544 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 RALGAPBQ86X10 1494 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 CCP110O43303 1012 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 STX1AQ16623 288 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 AMOTQ4VCS5 1084 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 MFSD6Q6ZSS7 791 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 IQCA1Q86XH1 822 aa5.77□□□□□ -1.49
LTN1-202ENST00000389194 ZNF622Q969S3 477 aaKnown RBP eCLIP5.77□□□□□ -1.492e-8■□□□□ 10.7
LTN1-202ENST00000389194 NUP153P49790 1475 aaKnown RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 KCNQ3O43525 872 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 MTIF2P46199 727 aaKnown RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 TYRO3Q06418 890 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 SF3A3Q12874 501 aaKnown RBP eCLIP5.76□□□□□ -1.49
LTN1-202ENST00000389194 PTPN21Q16825 1174 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 PAF1Q8N7H5 531 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 DHX58Q96C10 678 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 CCDC194A0A1B0GVG4 234 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 GOLGA6L10A6NI86 522 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 KIF5CO60282 957 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 LMAN1P49257 510 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 PICALMQ13492 652 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 SMC5Q8IY18 1101 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 RABEP2Q9H5N1 569 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 SEC63Q9UGP8 760 aaKnown RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 UNC13AQ9UPW8 1703 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 UGGT2Q9NYU1 1516 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 MAP3K19Q56UN5 1328 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 SLC5A1P13866 664 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 DNAJC21Q5F1R6 531 aaKnown RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 WDR78Q5VTH9 848 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 AEBP2Q6ZN18 517 aaPredicted RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 IFNL2Q8IZJ0 200 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 LZTFL1Q9NQ48 299 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 TTC16Q8NEE8 873 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 CAPZA3Q96KX2 299 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 CRACR2AQ9BSW2 395 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 JADE2Q9NQC1 790 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 SNRPA1P09661 255 aaKnown RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 CYP7A1P22680 504 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 DDX19AQ9NUU7 478 aaKnown RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 PUF60Q9UHX1 559 aaKnown RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 SLC4A4Q9Y6R1 1079 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 CUL7Q14999 1698 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 ANKRD36BQ8N2N9 1353 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 PEG3Q9GZU2 1588 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 LONRF3Q496Y0 759 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 NCOA7Q8NI08 942 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 CTNNBL1Q8WYA6 563 aaPredicted RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 NGLY1Q96IV0 654 aa5.76□□□□□ -1.49
LTN1-202ENST00000389194 BMP2KQ9NSY1 1161 aaPredicted RBP5.76□□□□□ -1.49
LTN1-202ENST00000389194 JAK2O60674 1132 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 PRDM1O75626 825 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 CLCN1P35523 988 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 HLTFQ14527 1009 aaKnown RBP eCLIP5.75□□□□□ -1.496e-6■■■■□ 22
LTN1-202ENST00000389194 JAKMIP3Q5VZ66 844 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 CATIPQ7Z7H3 387 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 STAMQ92783 540 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 KDM2BQ8NHM5 1336 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 TMCO5BA8MYB1 307 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 N4BP3O15049 544 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 PRC1O43663 620 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 CD2BP2O95400 341 aaKnown RBP5.75□□□□□ -1.49
LTN1-202ENST00000389194 RDXP35241 583 aaKnown RBP5.75□□□□□ -1.49
LTN1-202ENST00000389194 CMTR1Q8N1G2 835 aaKnown RBP5.75□□□□□ -1.49
LTN1-202ENST00000389194 PLEKHA4Q9H4M7 779 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 IFNKQ9P0W0 207 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 ERLIN1O75477 346 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 NOP2P46087 812 aaKnown RBP5.75□□□□□ -1.49
LTN1-202ENST00000389194 SPA17Q15506 151 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 ATP2B3Q16720 1220 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 MCMDC2Q4G0Z9 681 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 PAG1Q9NWQ8 432 aa5.75□□□□□ -1.49
LTN1-202ENST00000389194 EXOC5O00471 708 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms