RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 GTF3C2Q8WUA4 911 aaPredicted RBP4.57□□□□□ -1.68
RNU6-541P-201ENST00000384709 GOLGA2P5Q9HBQ8 144 aa4.57□□□□□ -1.68
RNU6-541P-201ENST00000384709 MTMR7Q9Y216 660 aa4.57□□□□□ -1.68
RNU6-541P-201ENST00000384709 GNEQ9Y223 722 aaKnown RBP4.57□□□□□ -1.68
RNU6-541P-201ENST00000384709 MSTNO14793 375 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 BRD1O95696 1058 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 SOX18P35713 384 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 SCNN1AP37088 669 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 ZAP70P43403 619 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 DGKGP49619 791 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 PCBP4P57723 403 aaKnown RBP4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 FKBP4Q02790 459 aaKnown RBP eCLIP4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 ALKBH2Q6NS38 261 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 LINC00114Q6XXX2 140 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 C20orf204Q6ZNR8 217 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 SCARF2Q96GP6 870 aaPredicted RBP4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 TRAIPQ9BWF2 469 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 ZFATQ9P243 1243 aa4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.56□□□□□ -1.68
RNU6-541P-201ENST00000384709 ICMTO60725 284 aa4.55□□□□□ -1.68
RNU6-541P-201ENST00000384709 COL9A3Q14050 684 aaPredicted RBP4.55□□□□□ -1.68
RNU6-541P-201ENST00000384709 TRIP4Q15650 581 aaPredicted RBP4.55□□□□□ -1.68
RNU6-541P-201ENST00000384709 CHSY3Q70JA7 882 aa4.55□□□□□ -1.68
RNU6-541P-201ENST00000384709 TRPM4Q8TD43 1214 aa4.55□□□□□ -1.68
RNU6-541P-201ENST00000384709 TTC9Q92623 222 aa4.55□□□□□ -1.68
RNU6-541P-201ENST00000384709 STARD13Q9Y3M8 1113 aa4.55□□□□□ -1.68
RNU6-541P-201ENST00000384709 K7ELQ4 463 aaPredicted RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 FAM13AO94988 1023 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 RPLP1P05386 114 aaKnown RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 TARSP26639 723 aaKnown RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 MZF1P28698 734 aaPredicted RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 ADH7P40394 386 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 NRLP54845 237 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 GPLD1P80108 840 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 PCSK7Q16549 785 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 NOM1Q5C9Z4 860 aaKnown RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 PDE12Q6L8Q7 609 aaKnown RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 ALYREFQ86V81 257 aaKnown RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 NLRP13Q86W25 1043 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 BEND7Q8N7W2 519 aaPredicted RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 PIK3R5Q8WYR1 880 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 BHMTQ93088 406 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 TLR7Q9NYK1 1049 aaKnown RBP4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 FRRS1LQ9P0K9 344 aa4.54□□□□□ -1.68
RNU6-541P-201ENST00000384709 CNTNAP5Q8WYK1 1306 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 PHF20L1A8MW92 1017 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 ZBTB42B2RXF5 422 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 FZD6O60353 706 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 XYLBO75191 536 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 NFKB1P19838 968 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 ALAS2P22557 587 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 MPSTP25325 297 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 EIF1AXP47813 144 aaKnown RBP4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 MARSP56192 900 aaKnown RBP4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 SNRPNP63162 240 aaKnown RBP4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 RGL4Q8IZJ4 473 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 CMTR1Q8N1G2 835 aaKnown RBP4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 MICALL1Q8N3F8 863 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 OR13H1Q8NG92 308 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 NEDD1Q8NHV4 660 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 MKL2Q9ULH7 1088 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 FNDC3AQ9Y2H6 1198 aaKnown RBP4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 USP20Q9Y2K6 914 aa4.53□□□□□ -1.68
RNU6-541P-201ENST00000384709 ARID1BQ8NFD5 2236 aaPredicted RBP4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 PIK3R2O00459 728 aa4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 SASH3O75995 380 aa4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 PDGFAP04085 211 aa4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 ARHGAP4P98171 946 aa4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 DHX32Q7L7V1 743 aaKnown RBP4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 RAB44Q7Z6P3 723 aaPredicted RBP4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 SPOCK3Q9BQ16 436 aa4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 DNAJB12Q9NXW2 375 aaKnown RBP4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 SLC6A14Q9UN76 642 aa4.52□□□□□ -1.69
RNU6-541P-201ENST00000384709 GNB5O14775 395 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 MMP20O60882 483 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 KIF4AO95239 1232 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 ALBP02768 609 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 RARAP10276 462 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 NID1P14543 1247 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 USP5P45974 858 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 SERPINB4P48594 390 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 KCNA1Q09470 495 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 GRIK5Q16478 980 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 GJD3Q8N144 294 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 CCER1Q8TC90 406 aaPredicted RBP4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 GPR152Q8TDT2 470 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 NUDT16Q96DE0 195 aaKnown RBP4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 PNMA5Q96PV4 448 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 CITED4Q96RK1 184 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 LPIN3Q9BQK8 851 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 GGNBP2Q9H3C7 697 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 NAGPAQ9UK23 515 aa4.51□□□□□ -1.69
RNU6-541P-201ENST00000384709 UBAP1LF5GYI3 381 aa4.5□□□□□ -1.69
RNU6-541P-201ENST00000384709 IGHA2P01877 340 aa4.5□□□□□ -1.69
RNU6-541P-201ENST00000384709 COL8A1P27658 744 aa4.5□□□□□ -1.69
RNU6-541P-201ENST00000384709 PLAURQ03405 335 aa4.5□□□□□ -1.69
RNU6-541P-201ENST00000384709 EHHADHQ08426 723 aa4.5□□□□□ -1.69
RNU6-541P-201ENST00000384709 MTMR3Q13615 1198 aa4.5□□□□□ -1.69
RNU6-541P-201ENST00000384709 PODNQ7Z5L7 613 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms