RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
VCX3A-201ENST00000381089 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
VCX3A-201ENST00000381089 GMPSP49915 693 aaPredicted RBP20.91■□□□□ 0.94
VCX3A-201ENST00000381089 KIAA2012Q0VF49 1180 aa20.91■□□□□ 0.94
VCX3A-201ENST00000381089 TCIRG1Q13488 830 aa20.91■□□□□ 0.94
VCX3A-201ENST00000381089 GRAPQ13588 217 aa20.91■□□□□ 0.94
VCX3A-201ENST00000381089 RALBP1Q15311 655 aa20.91■□□□□ 0.94
VCX3A-201ENST00000381089 CST9Q5W186 159 aa20.91■□□□□ 0.94
VCX3A-201ENST00000381089 CYP4F22Q6NT55 531 aa20.91■□□□□ 0.94
VCX3A-201ENST00000381089 SLC51AQ86UW1 340 aa20.91■□□□□ 0.94
VCX3A-201ENST00000381089 GRAPLQ8TC17 118 aaPredicted RBP20.91■□□□□ 0.94
VCX3A-201ENST00000381089 NECTIN2Q92692 538 aa20.91■□□□□ 0.94
VCX3A-201ENST00000381089 THSD7BQ9C0I4 1608 aa20.9■□□□□ 0.94
VCX3A-201ENST00000381089 FMR1Q06787 632 aaKnown RBP eCLIP20.9■□□□□ 0.94
VCX3A-201ENST00000381089 CELF2O95319 508 aaKnown RBP20.89■□□□□ 0.93
VCX3A-201ENST00000381089 MAP2K2P36507 400 aa20.89■□□□□ 0.93
VCX3A-201ENST00000381089 ZC3H15Q8WU90 426 aaKnown RBP20.89■□□□□ 0.93
VCX3A-201ENST00000381089 ABHD8Q96I13 439 aa20.89■□□□□ 0.93
VCX3A-201ENST00000381089 LAMB2P55268 1798 aa20.88■□□□□ 0.93
VCX3A-201ENST00000381089 RAD17O75943 681 aa20.88■□□□□ 0.93
VCX3A-201ENST00000381089 H7C1D1 291 aa20.87■□□□□ 0.93
VCX3A-201ENST00000381089 HHIPL1Q96JK4 782 aa20.87■□□□□ 0.93
VCX3A-201ENST00000381089 CA12O43570 354 aa20.86■□□□□ 0.93
VCX3A-201ENST00000381089 CDC37L1Q7L3B6 337 aa20.86■□□□□ 0.93
VCX3A-201ENST00000381089 SAPCD2Q86UD0 394 aa20.86■□□□□ 0.93
VCX3A-201ENST00000381089 PGAP2Q9UHJ9 254 aa20.86■□□□□ 0.93
VCX3A-201ENST00000381089 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
VCX3A-201ENST00000381089 GLIS2Q9BZE0 524 aaPredicted RBP20.85■□□□□ 0.93
VCX3A-201ENST00000381089 ZNF408Q9H9D4 720 aa20.85■□□□□ 0.93
VCX3A-201ENST00000381089 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
VCX3A-201ENST00000381089 CHL1O00533 1208 aa20.84■□□□□ 0.93
VCX3A-201ENST00000381089 HDGFL1Q5TGJ6 251 aa20.84■□□□□ 0.93
VCX3A-201ENST00000381089 PLBD2Q8NHP8 589 aa20.84■□□□□ 0.93
VCX3A-201ENST00000381089 CHPF2Q9P2E5 772 aa20.84■□□□□ 0.93
VCX3A-201ENST00000381089 CNOT7Q9UIV1 285 aaKnown RBP20.84■□□□□ 0.93
VCX3A-201ENST00000381089 AOC2O75106 756 aa20.83■□□□□ 0.93
VCX3A-201ENST00000381089 HOXB7P09629 217 aa20.83■□□□□ 0.93
VCX3A-201ENST00000381089 ANKRD13DQ6ZTN6 518 aa20.83■□□□□ 0.93
VCX3A-201ENST00000381089 DBF4Q9UBU7 674 aaPredicted RBP20.83■□□□□ 0.93
VCX3A-201ENST00000381089 WDR43Q15061 677 aaKnown RBP eCLIP20.82■□□□□ 0.92
VCX3A-201ENST00000381089 WASHC4Q2M389 1173 aa20.82■□□□□ 0.92
VCX3A-201ENST00000381089 MICALL2Q8IY33 904 aa20.82■□□□□ 0.92
VCX3A-201ENST00000381089 CCDC146Q8IYE0 955 aa20.82■□□□□ 0.92
VCX3A-201ENST00000381089 DPF2Q92785 391 aa20.82■□□□□ 0.92
VCX3A-201ENST00000381089 NSFL1CQ9UNZ2 370 aaKnown RBP20.82■□□□□ 0.92
VCX3A-201ENST00000381089 BRPF1P55201 1214 aaPredicted RBP20.81■□□□□ 0.92
VCX3A-201ENST00000381089 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
VCX3A-201ENST00000381089 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
VCX3A-201ENST00000381089 EYA3Q99504 573 aa20.81■□□□□ 0.92
VCX3A-201ENST00000381089 MYBBP1AQ9BQG0 1328 aaKnown RBP20.8■□□□□ 0.92
VCX3A-201ENST00000381089 YDJCA8MPS7 323 aa20.8■□□□□ 0.92
VCX3A-201ENST00000381089 C6orf229H3BNL8 230 aa20.8■□□□□ 0.92
VCX3A-201ENST00000381089 HIRAP54198 1017 aaPredicted RBP20.8■□□□□ 0.92
VCX3A-201ENST00000381089 SF3B3Q15393 1217 aaKnown RBP20.8■□□□□ 0.92
VCX3A-201ENST00000381089 KRT24Q2M2I5 525 aa20.8■□□□□ 0.92
VCX3A-201ENST00000381089 HYPKQ9NX55 129 aa20.8■□□□□ 0.92
VCX3A-201ENST00000381089 LRRC37AA6NMS7 1700 aa20.8■□□□□ 0.92
VCX3A-201ENST00000381089 CCDC85CA6NKD9 419 aa20.79■□□□□ 0.92
VCX3A-201ENST00000381089 HSP90B1P14625 803 aaKnown RBP20.79■□□□□ 0.92
VCX3A-201ENST00000381089 RPS12P25398 132 aaKnown RBP20.79■□□□□ 0.92
VCX3A-201ENST00000381089 FAM89AQ96GI7 184 aa20.79■□□□□ 0.92
VCX3A-201ENST00000381089 ISCA1Q9BUE6 129 aa20.79■□□□□ 0.92
VCX3A-201ENST00000381089 TSKSQ9UJT2 592 aa20.79■□□□□ 0.92
VCX3A-201ENST00000381089 TAF1P21675 1872 aa20.78■□□□□ 0.92
VCX3A-201ENST00000381089 DUOX1Q9NRD9 1551 aa20.78■□□□□ 0.92
VCX3A-201ENST00000381089 PSMD14O00487 310 aa20.78■□□□□ 0.92
VCX3A-201ENST00000381089 NOGQ13253 232 aa20.78■□□□□ 0.92
VCX3A-201ENST00000381089 ZNF428Q96B54 188 aa20.78■□□□□ 0.92
VCX3A-201ENST00000381089 DBNDD1Q9H9R9 158 aa20.78■□□□□ 0.92
VCX3A-201ENST00000381089 ZBTB12Q9Y330 459 aaPredicted RBP20.78■□□□□ 0.92
VCX3A-201ENST00000381089 DDX60Q8IY21 1712 aaKnown RBP20.78■□□□□ 0.92
VCX3A-201ENST00000381089 ATP5J2-PTCD1G3V325 749 aa20.77■□□□□ 0.92
VCX3A-201ENST00000381089 RIMBP2O15034 1052 aa20.77■□□□□ 0.92
VCX3A-201ENST00000381089 HUNKP57058 714 aa20.77■□□□□ 0.92
VCX3A-201ENST00000381089 USP48Q86UV5 1035 aa20.77■□□□□ 0.92
VCX3A-201ENST00000381089 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
VCX3A-201ENST00000381089 TRIM35Q9UPQ4 493 aa20.77■□□□□ 0.92
VCX3A-201ENST00000381089 FAM161AQ3B820 660 aa20.76■□□□□ 0.91
VCX3A-201ENST00000381089 DCPSQ96C86 337 aaKnown RBP20.76■□□□□ 0.91
VCX3A-201ENST00000381089 G3V3G9 751 aa20.75■□□□□ 0.91
VCX3A-201ENST00000381089 IRS4O14654 1257 aaPredicted RBP20.75■□□□□ 0.91
VCX3A-201ENST00000381089 ECE2O60344 883 aa20.75■□□□□ 0.91
VCX3A-201ENST00000381089 GOLGA2Q08379 1002 aa20.75■□□□□ 0.91
VCX3A-201ENST00000381089 TRIM28Q13263 835 aaKnown RBP20.75■□□□□ 0.91
VCX3A-201ENST00000381089 DCAF8Q5TAQ9 597 aa20.75■□□□□ 0.91
VCX3A-201ENST00000381089 SAMD7Q7Z3H4 446 aa20.75■□□□□ 0.91
VCX3A-201ENST00000381089 KRT26Q7Z3Y9 468 aa20.75■□□□□ 0.91
VCX3A-201ENST00000381089 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
VCX3A-201ENST00000381089 SHTN1A0MZ66 631 aa20.74■□□□□ 0.91
VCX3A-201ENST00000381089 RPS8P62241 208 aaKnown RBP20.74■□□□□ 0.91
VCX3A-201ENST00000381089 GPSM2P81274 684 aa20.74■□□□□ 0.91
VCX3A-201ENST00000381089 TBC1D10BQ4KMP7 808 aaPredicted RBP20.74■□□□□ 0.91
VCX3A-201ENST00000381089 RTL5Q5HYW3 569 aaPredicted RBP20.74■□□□□ 0.91
VCX3A-201ENST00000381089 DUSP27Q5VZP5 1158 aa20.74■□□□□ 0.91
VCX3A-201ENST00000381089 RIC3Q7Z5B4 369 aa20.74■□□□□ 0.91
VCX3A-201ENST00000381089 C2orf69Q8N8R5 385 aa20.74■□□□□ 0.91
VCX3A-201ENST00000381089 ZC3H12CQ9C0D7 883 aaKnown RBP20.74■□□□□ 0.91
VCX3A-201ENST00000381089 POLLQ9UGP5 575 aa20.74■□□□□ 0.91
VCX3A-201ENST00000381089 MLLT1Q03111 559 aaPredicted RBP20.73■□□□□ 0.91
VCX3A-201ENST00000381089 DOK7Q18PE1 504 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms