RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 DDB1Q16531 1140 aa20.77■□□□□ 0.92
UBL3-201ENST00000380680 ARHGEF25Q86VW2 580 aa20.77■□□□□ 0.92
UBL3-201ENST00000380680 MCM5P33992 734 aa20.77■□□□□ 0.92
UBL3-201ENST00000380680 DDX19AQ9NUU7 478 aaKnown RBP20.77■□□□□ 0.92
UBL3-201ENST00000380680 ALKQ9UM73 1620 aa20.77■□□□□ 0.92
UBL3-201ENST00000380680 KLF18A0A0U1RQI7 1052 aa20.77■□□□□ 0.92
UBL3-201ENST00000380680 GOLGA8AA7E2F4 631 aa20.77■□□□□ 0.92
UBL3-201ENST00000380680 FSIP1Q8NA03 581 aa20.77■□□□□ 0.92
UBL3-201ENST00000380680 NOL7Q9UMY1 257 aaKnown RBP20.77■□□□□ 0.92
UBL3-201ENST00000380680 DTNBO60941 627 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 BEND3Q5T5X7 828 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 CHST3Q7LGC8 479 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 CCDC196A0A1B0GTZ2 297 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 DZIP3Q86Y13 1208 aaKnown RBP20.76■□□□□ 0.91
UBL3-201ENST00000380680 NDUFB9Q9Y6M9 179 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 SYT1P21579 422 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 PRIM1P49642 420 aaKnown RBP20.76■□□□□ 0.91
UBL3-201ENST00000380680 ANO8Q9HCE9 1232 aaPredicted RBP20.76■□□□□ 0.91
UBL3-201ENST00000380680 ANKIB1Q9P2G1 1089 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 AOX1Q06278 1338 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 RBM10P98175 930 aaKnown RBP20.76■□□□□ 0.91
UBL3-201ENST00000380680 TNNI3KQ59H18 835 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 TMEM67Q5HYA8 995 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 RUFY3Q7L099 469 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 FPGT-TNNI3KV9GXZ4 949 aa20.76■□□□□ 0.91
UBL3-201ENST00000380680 LMTK2Q8IWU2 1503 aa20.75■□□□□ 0.91
UBL3-201ENST00000380680 UQCRFS1P1P0C7P4 283 aa20.75■□□□□ 0.91
UBL3-201ENST00000380680 SNX14Q9Y5W7 946 aa20.75■□□□□ 0.91
UBL3-201ENST00000380680 PPRC1Q5VV67 1664 aaKnown RBP20.75■□□□□ 0.91
UBL3-201ENST00000380680 MNS1Q8NEH6 495 aa20.75■□□□□ 0.91
UBL3-201ENST00000380680 IRS4O14654 1257 aaPredicted RBP20.74■□□□□ 0.91
UBL3-201ENST00000380680 IARSP41252 1262 aaKnown RBP20.74■□□□□ 0.91
UBL3-201ENST00000380680 IQCA1Q86XH1 822 aa20.74■□□□□ 0.91
UBL3-201ENST00000380680 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
UBL3-201ENST00000380680 ZNF594Q96JF6 807 aaPredicted RBP20.74■□□□□ 0.91
UBL3-201ENST00000380680 RNF41Q9H4P4 317 aaPredicted RBP20.74■□□□□ 0.91
UBL3-201ENST00000380680 PROSER3Q2NL68 480 aa20.74■□□□□ 0.91
UBL3-201ENST00000380680 RAD50Q92878 1312 aa20.74■□□□□ 0.91
UBL3-201ENST00000380680 EYA2O00167 538 aa20.74■□□□□ 0.91
UBL3-201ENST00000380680 PHKG2P15735 406 aa20.74■□□□□ 0.91
UBL3-201ENST00000380680 CCDC152Q4G0S7 254 aa20.74■□□□□ 0.91
UBL3-201ENST00000380680 CCDC129Q6ZRS4 1044 aa20.74■□□□□ 0.91
UBL3-201ENST00000380680 DZIP1Q86YF9 867 aaKnown RBP20.74■□□□□ 0.91
UBL3-201ENST00000380680 USP5P45974 858 aa20.73■□□□□ 0.91
UBL3-201ENST00000380680 ANO10Q9NW15 660 aa20.73■□□□□ 0.91
UBL3-201ENST00000380680 NIP7Q9Y221 180 aaKnown RBP eCLIP20.73■□□□□ 0.91
UBL3-201ENST00000380680 A0A1B0GUL7 405 aa20.73■□□□□ 0.91
UBL3-201ENST00000380680 FILIP1LQ4L180 1135 aa20.73■□□□□ 0.91
UBL3-201ENST00000380680 NEURL1BA8MQ27 555 aa20.73■□□□□ 0.91
UBL3-201ENST00000380680 METAP2P50579 478 aaKnown RBP eCLIP20.73■□□□□ 0.91
UBL3-201ENST00000380680 ZSCAN16Q9H4T2 348 aaPredicted RBP20.73■□□□□ 0.91
UBL3-201ENST00000380680 RNF113AO15541 343 aaKnown RBP20.72■□□□□ 0.91
UBL3-201ENST00000380680 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
UBL3-201ENST00000380680 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
UBL3-201ENST00000380680 SETBP1Q9Y6X0 1596 aa20.72■□□□□ 0.91
UBL3-201ENST00000380680 ZNF165P49910 485 aa20.72■□□□□ 0.91
UBL3-201ENST00000380680 MFSD6Q6ZSS7 791 aa20.72■□□□□ 0.91
UBL3-201ENST00000380680 MKNK2Q9HBH9 465 aa20.72■□□□□ 0.91
UBL3-201ENST00000380680 QRICH2Q9H0J4 1663 aa20.72■□□□□ 0.91
UBL3-201ENST00000380680 LAMC1P11047 1609 aa20.72■□□□□ 0.91
UBL3-201ENST00000380680 ADCY5O95622 1261 aa20.71■□□□□ 0.91
UBL3-201ENST00000380680 EDC3Q96F86 508 aaKnown RBP20.71■□□□□ 0.91
UBL3-201ENST00000380680 PNPLA6Q8IY17 1366 aa20.71■□□□□ 0.91
UBL3-201ENST00000380680 TULP4Q9NRJ4 1543 aa20.71■□□□□ 0.91
UBL3-201ENST00000380680 CCDC191Q8NCU4 936 aa20.71■□□□□ 0.91
UBL3-201ENST00000380680 EAF2Q96CJ1 260 aaPredicted RBP20.71■□□□□ 0.91
UBL3-201ENST00000380680 CTDP1Q9Y5B0 961 aaPredicted RBP20.71■□□□□ 0.91
UBL3-201ENST00000380680 TTLL5Q6EMB2 1281 aa20.71■□□□□ 0.91
UBL3-201ENST00000380680 CTCFLQ8NI51 663 aaPredicted RBP20.71■□□□□ 0.91
UBL3-201ENST00000380680 PALD1Q9ULE6 856 aa20.71■□□□□ 0.91
UBL3-201ENST00000380680 DNAJC10Q8IXB1 793 aa20.7■□□□□ 0.9
UBL3-201ENST00000380680 IBTKQ9P2D0 1353 aaPredicted RBP20.7■□□□□ 0.9
UBL3-201ENST00000380680 HSPA4P34932 840 aa20.7■□□□□ 0.9
UBL3-201ENST00000380680 SSRP1Q08945 709 aaKnown RBP20.7■□□□□ 0.9
UBL3-201ENST00000380680 APOBRQ0VD83 1088 aa20.7■□□□□ 0.9
UBL3-201ENST00000380680 SOGA3Q5TF21 947 aa20.7■□□□□ 0.9
UBL3-201ENST00000380680 CCAR1Q8IX12 1150 aaKnown RBP20.7■□□□□ 0.9
UBL3-201ENST00000380680 DACT1Q9NYF0 836 aa20.7■□□□□ 0.9
UBL3-201ENST00000380680 DHX32Q7L7V1 743 aaKnown RBP20.7■□□□□ 0.9
UBL3-201ENST00000380680 BIN1O00499 593 aa20.69■□□□□ 0.9
UBL3-201ENST00000380680 CTAGE5O15320 804 aa20.69■□□□□ 0.9
UBL3-201ENST00000380680 CDK5RAP3Q96JB5 506 aa20.69■□□□□ 0.9
UBL3-201ENST00000380680 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
UBL3-201ENST00000380680 VSIG10Q8N0Z9 540 aa20.69■□□□□ 0.9
UBL3-201ENST00000380680 NOC3LQ8WTT2 800 aaKnown RBP20.69■□□□□ 0.9
UBL3-201ENST00000380680 DACH1Q9UI36 760 aa20.69■□□□□ 0.9
UBL3-201ENST00000380680 SLC27A2O14975 620 aa20.69■□□□□ 0.9
UBL3-201ENST00000380680 PRC1O43663 620 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 CFAP100Q494V2 611 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 SLC26A6Q9BXS9 759 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 TCEAL9Q9UHQ7 104 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 TMEM94Q12767 1356 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 SMTNL1A8MU46 457 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 NBPF5PQ86XG9 351 aaPredicted RBP20.68■□□□□ 0.9
UBL3-201ENST00000380680 ANKRD18AQ8IVF6 992 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
UBL3-201ENST00000380680 UQCRHLA0A096LP55 91 aa20.67■□□□□ 0.9
UBL3-201ENST00000380680 UQCRHP07919 91 aa20.67■□□□□ 0.9
UBL3-201ENST00000380680 RBM5P52756 815 aaKnown RBP eCLIP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms