RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NSFL1CQ9UNZ2 370 aaKnown RBP15.71■□□□□ 0.1
GPC6-201ENST00000377047 CPLX3Q8WVH0 158 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 JDP2Q8WYK2 163 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 ESR2Q92731 530 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 SSFA2P28290 1259 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 IRS4O14654 1257 aaPredicted RBP15.7■□□□□ 0.1
GPC6-201ENST00000377047 SLC9C2Q5TAH2 1124 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 TAF3Q5VWG9 929 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 HEATR3Q7Z4Q2 680 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 MAGEB6P1A0A0J9YX57 407 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 BIN1O00499 593 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 NF2P35240 595 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 DNA2P51530 1060 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 CCDC178Q5BJE1 867 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 KCNA6P17658 529 aa15.7■□□□□ 0.1
GPC6-201ENST00000377047 GNPATO15228 680 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 CTAGE5O15320 804 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 PLS1Q14651 629 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 MTERF4Q7Z6M4 381 aaKnown RBP15.69■□□□□ 0.1
GPC6-201ENST00000377047 ZMYM3Q14202 1370 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 EIF3JO75822 258 aaKnown RBP15.69■□□□□ 0.1
GPC6-201ENST00000377047 ECM2O94769 699 aaPredicted RBP15.69■□□□□ 0.1
GPC6-201ENST00000377047 CTNNBL1Q8WYA6 563 aaPredicted RBP15.69■□□□□ 0.1
GPC6-201ENST00000377047 LRRC2Q9BYS8 371 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 TNNT1P13805 278 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 CA8P35219 290 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 BMP2KLQ5H9B9 411 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 HELBQ8NG08 1087 aaPredicted RBP15.69■□□□□ 0.1
GPC6-201ENST00000377047 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 MACROD2A1Z1Q3 448 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 ZBTB43O43298 467 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 STX6O43752 255 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 CNNM2Q9H8M5 875 aa15.69■□□□□ 0.1
GPC6-201ENST00000377047 PA2G4Q9UQ80 394 aaKnown RBP15.69■□□□□ 0.1
GPC6-201ENST00000377047 NUP153P49790 1475 aaKnown RBP15.69■□□□□ 0.1
GPC6-201ENST00000377047 MAP3K5Q99683 1374 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 UGGT2Q9NYU1 1516 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 RBM10P98175 930 aaKnown RBP15.68■□□□□ 0.1
GPC6-201ENST00000377047 PPP4R3BQ5MIZ7 849 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 DCAF5Q96JK2 942 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 TBCAO75347 108 aaKnown RBP15.68■□□□□ 0.1
GPC6-201ENST00000377047 ABCC10Q5T3U5 1492 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 EZRP15311 586 aaKnown RBP15.68■□□□□ 0.1
GPC6-201ENST00000377047 BRF1Q92994 677 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 GDPD2Q9HCC8 539 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 PUF60Q9UHX1 559 aaKnown RBP15.68■□□□□ 0.1
GPC6-201ENST00000377047 NPATQ14207 1427 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 TRAPPC3LQ5T215 181 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 MRPL50Q8N5N7 158 aaKnown RBP15.68■□□□□ 0.1
GPC6-201ENST00000377047 ARHGAP45Q92619 1136 aa15.68■□□□□ 0.1
GPC6-201ENST00000377047 MCMDC2Q4G0Z9 681 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 RTN1Q16799 776 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 MMRN2Q9H8L6 949 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 ISM2Q6H9L7 571 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 TRPM2O94759 1503 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 JAG2Q9Y219 1238 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 ZSCAN12O43309 604 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 PRC1O43663 620 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 KIF5CO60282 957 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 IGHDP01880 384 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 ERMNQ8TAM6 284 aa15.67■□□□□ 0.1
GPC6-201ENST00000377047 HOXC9P31274 260 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 PAG1Q9NWQ8 432 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 YEATS4O95619 227 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 CWF19L2Q2TBE0 894 aaKnown RBP15.66■□□□□ 0.1
GPC6-201ENST00000377047 PYM1Q9BRP8 204 aaKnown RBP15.66■□□□□ 0.1
GPC6-201ENST00000377047 NBPF7P0C2Y1 421 aaPredicted RBP15.66■□□□□ 0.1
GPC6-201ENST00000377047 RBM17Q96I25 401 aaKnown RBP15.66■□□□□ 0.1
GPC6-201ENST00000377047 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
GPC6-201ENST00000377047 ATP8B2P98198 1209 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 TMTC2Q8N394 836 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 NECAB1Q8N987 351 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 EYA3Q99504 573 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 LRRC27Q9C0I9 530 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 CLIP2Q9UDT6 1046 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
GPC6-201ENST00000377047 SDSP20132 328 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 CASQ1P31415 396 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 NUCB1Q02818 461 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 TRAF1Q13077 416 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 SMARCC2Q8TAQ2 1214 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 EYA1Q99502 592 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 MIGA1Q8NAN2 632 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 CCDC102AQ96A19 550 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 DDX19AQ9NUU7 478 aaKnown RBP15.65■□□□□ 0.1
GPC6-201ENST00000377047 EXOC1Q9NV70 894 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 CTNNA2P26232 953 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 MAGEB6Q8N7X4 407 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 ALG1Q9BT22 464 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 CTTNBP2Q8WZ74 1663 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
GPC6-201ENST00000377047 NAPAP54920 295 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 ANKRD2Q9GZV1 360 aa15.65■□□□□ 0.1
GPC6-201ENST00000377047 USO1O60763 962 aaKnown RBP15.65■□□□□ 0.1
GPC6-201ENST00000377047 LMOD1P29536 600 aaPredicted RBP15.65■□□□□ 0.1
GPC6-201ENST00000377047 RBM8AQ9Y5S9 174 aaKnown RBP15.65■□□□□ 0.1
GPC6-201ENST00000377047 CCDC174Q6PII3 467 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 FAM114A1Q8IWE2 563 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms