RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 TRMT1Q9NXH9 659 aaKnown RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 C9orf78Q9NZ63 289 aaPredicted RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 ZNF589Q86UQ0 364 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-201ENST00000376656 ERC1Q8IUD2 1116 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 BOLA2Q9H3K6 86 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 LGR6Q9HBX8 967 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 HIP1O00291 1037 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 SASH1O94885 1247 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-201ENST00000376656 MRFAP1L1Q96HT8 127 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 FSD1Q9BTV5 496 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 ALDH8A1Q9H2A2 487 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-201ENST00000376656 FILIP1Q7Z7B0 1213 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 PIK3C2AO00443 1686 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 KRT222Q8N1A0 295 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 CCDC69A6NI79 296 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 CAVIN2O95810 425 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 TERF2Q15554 542 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
TRIM39-201ENST00000376656 CCZ1BP86790 482 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 CCZ1P86791 482 aaPredicted RBP19.42■□□□□ 0.7
TRIM39-201ENST00000376656 ELF2Q15723 593 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 CWF19L2Q2TBE0 894 aaKnown RBP19.42■□□□□ 0.7
TRIM39-201ENST00000376656 GTF3C6Q969F1 213 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 MAP3K2Q9Y2U5 619 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 MED23Q9ULK4 1368 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 FBXO38Q6PIJ6 1188 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 NEMFO60524 1076 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 TAF3Q5VWG9 929 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 FTOQ9C0B1 505 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRIM39-201ENST00000376656 CEMIPQ8WUJ3 1361 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 ERBB3P21860 1342 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 H3BQV1 296 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 STX1AQ16623 288 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 IFFO2Q5TF58 517 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 TMEM2Q9UHN6 1383 aa19.4■□□□□ 0.7
TRIM39-201ENST00000376656 GOLPH3LQ9H4A5 285 aa19.4■□□□□ 0.7
TRIM39-201ENST00000376656 RGPD8O14715 1765 aaPredicted RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 FOSBP53539 338 aa19.4■□□□□ 0.7
TRIM39-201ENST00000376656 CCAR1Q8IX12 1150 aaKnown RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 DHX40Q8IX18 779 aaKnown RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 CCAR2Q8N163 923 aaKnown RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 EDC3Q96F86 508 aaKnown RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 ERO1AQ96HE7 468 aa19.4■□□□□ 0.7
TRIM39-201ENST00000376656 BECN2A8MW95 431 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 HOXB7P09629 217 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 CFAP45Q9UL16 551 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 PROSER3Q2NL68 480 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 SIL1Q9H173 461 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 FAM53CQ9NYF3 392 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 TAF5LO75529 589 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ADD1P35611 737 aaKnown RBP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 G3BP1Q13283 466 aaKnown RBP eCLIP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 TSGA10IPQ3SY00 556 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 KAZALD1Q96I82 304 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ST7Q9NRC1 585 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 HMG20BQ9P0W2 317 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 NPHP1O15259 732 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 DIP2BQ9P265 1576 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 HSP90B1P14625 803 aaKnown RBP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 Q6ZUG5 572 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ERCC4Q92889 916 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ZSCAN16Q9H4T2 348 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 JCADQ9P266 1359 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ALDH1L1O75891 902 aa19.37■□□□□ 0.69
TRIM39-201ENST00000376656 FBXW7Q969H0 707 aa19.37■□□□□ 0.69
TRIM39-201ENST00000376656 BICC1Q9H694 974 aaKnown RBP19.37■□□□□ 0.69
TRIM39-201ENST00000376656 COL15A1P39059 1388 aa19.37■□□□□ 0.69
TRIM39-201ENST00000376656 SLU7O95391 586 aaKnown RBP19.36■□□□□ 0.69
TRIM39-201ENST00000376656 SNW1Q13573 536 aaKnown RBP19.36■□□□□ 0.69
TRIM39-201ENST00000376656 NEK1Q96PY6 1258 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 LRRC2Q9BYS8 371 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 CTAGE5O15320 804 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 LTKP29376 864 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 KDM3BQ7LBC6 1761 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 KLHDC4Q8TBB5 520 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 ZNF446Q9NWS9 450 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 DBF4Q9UBU7 674 aaPredicted RBP19.36■□□□□ 0.69
TRIM39-201ENST00000376656 AOPEPQ8N6M6 819 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 MED1Q15648 1581 aaPredicted RBP19.35■□□□□ 0.69
TRIM39-201ENST00000376656 SCRN1Q12765 414 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 BTBD11A6QL63 1104 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 ZBTB22O15209 634 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 KSR2Q6VAB6 950 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 RCOR1Q9UKL0 485 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 CHGBP05060 677 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 ESF1Q9H501 851 aaKnown RBP19.35■□□□□ 0.69
TRIM39-201ENST00000376656 CCDC73Q6ZRK6 1079 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-201ENST00000376656 KRT32Q14532 448 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 SLFNL1Q499Z3 407 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 NBPF11Q86T75 865 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 USP28Q96RU2 1077 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 ANO10Q9NW15 660 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 TNRQ92752 1358 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms