RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 C11orf57Q6ZUT1 292 aaPredicted RBP13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 FLT4P35916 1363 aa13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 KCNQ3O43525 872 aa13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 TOB2Q14106 344 aaPredicted RBP13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 BICD2Q8TD16 824 aa13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 RUFY2Q8WXA3 655 aa13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 ZNF215Q9UL58 517 aaPredicted RBP13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 TTC41PQ6P2S7 1318 aa13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 CEBPZQ03701 1054 aaKnown RBP13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 ST7Q9NRC1 585 aa13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 A0A0D9SFI3 127 aa13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 LRRC8AQ8IWT6 810 aa13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 TRMT1Q9NXH9 659 aaKnown RBP13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 SYCP1Q15431 976 aa13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 CLASRPQ8N2M8 674 aaKnown RBP13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 TLR7Q9NYK1 1049 aaKnown RBP13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 PAXBP1Q9Y5B6 917 aa13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 MORC2Q9Y6X9 1032 aaPredicted RBP13.56□□□□□ -0.24
TM9SF2-201ENST00000376387 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 USP16Q9Y5T5 823 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 NPHP3Q7Z494 1330 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 AACSQ86V21 672 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 DNAAF4Q8WXU2 420 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 FTOQ9C0B1 505 aaKnown RBP eCLIP13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 SCAND2PQ9GZW5 306 aaPredicted RBP13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 CCDC8Q9H0W5 538 aaPredicted RBP13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 DDX19AQ9NUU7 478 aaKnown RBP13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 NPHP1O15259 732 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 FOSBP53539 338 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 IQCB1Q15051 598 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 ERCC4Q92889 916 aaPredicted RBP13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 TECPR2O15040 1411 aa13.55□□□□□ -0.24
TM9SF2-201ENST00000376387 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 IFIT2P09913 472 aaKnown RBP13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 ERBB3P21860 1342 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 NPHP4O75161 1426 aaPredicted RBP13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 HTATSF1O43719 755 aaKnown RBP13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 BLOC1S2Q6QNY1 142 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 ZNF589Q86UQ0 364 aaPredicted RBP13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 FBXW7Q969H0 707 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 ADCY9O60503 1353 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 CHGBP05060 677 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 RPS6KB1P23443 525 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 EVI5LQ96CN4 794 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 LGR6Q9HBX8 967 aa13.54□□□□□ -0.24
TM9SF2-201ENST00000376387 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
TM9SF2-201ENST00000376387 ELF2Q15723 593 aa13.53□□□□□ -0.24
TM9SF2-201ENST00000376387 FBXO38Q6PIJ6 1188 aa13.53□□□□□ -0.24
TM9SF2-201ENST00000376387 FILIP1Q7Z7B0 1213 aa13.53□□□□□ -0.24
TM9SF2-201ENST00000376387 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
TM9SF2-201ENST00000376387 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
TM9SF2-201ENST00000376387 EAF2Q96CJ1 260 aaPredicted RBP13.53□□□□□ -0.24
TM9SF2-201ENST00000376387 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
TM9SF2-201ENST00000376387 SKILP12757 684 aa13.52□□□□□ -0.24
TM9SF2-201ENST00000376387 PDCP20941 246 aa13.52□□□□□ -0.24
TM9SF2-201ENST00000376387 GABPB1Q06547 395 aaPredicted RBP13.52□□□□□ -0.24
TM9SF2-201ENST00000376387 NYAP1Q6ZVC0 841 aa13.52□□□□□ -0.24
TM9SF2-201ENST00000376387 BRF1Q92994 677 aa13.52□□□□□ -0.24
TM9SF2-201ENST00000376387 PPFIA3O75145 1194 aa13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 RESTQ13127 1097 aa13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 TERF2Q15554 542 aa13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 CWF19L2Q2TBE0 894 aaKnown RBP13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 LRRN4CLQ8ND94 238 aa13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 SASH1O94885 1247 aa13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 RBM6P78332 1123 aaKnown RBP13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 CCZ1BP86790 482 aa13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 CCZ1P86791 482 aaPredicted RBP13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 GOLPH3LQ9H4A5 285 aa13.52□□□□□ -0.25
TM9SF2-201ENST00000376387 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 EIF4A1P60842 406 aaKnown RBP13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 PTPN14Q15678 1187 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 ZNF622Q969S3 477 aaKnown RBP eCLIP13.51□□□□□ -0.256e-7■■□□□ 11.8
TM9SF2-201ENST00000376387 ZNF446Q9NWS9 450 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 NWD1Q149M9 1564 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 TNRQ92752 1358 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 GOLGA6L19H0YKK7 550 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 HOXC9P31274 260 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 PROSER3Q2NL68 480 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 ZNF397Q8NF99 534 aaPredicted RBP13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 SIL1Q9H173 461 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 NDUFB9Q9Y6M9 179 aa13.51□□□□□ -0.25
TM9SF2-201ENST00000376387 PSMA5P28066 241 aa13.5□□□□□ -0.25
TM9SF2-201ENST00000376387 CDC25BP30305 580 aa13.5□□□□□ -0.25
TM9SF2-201ENST00000376387 ERICH4A6NGS2 130 aa13.5□□□□□ -0.25
TM9SF2-201ENST00000376387 DHX40Q8IX18 779 aaKnown RBP13.5□□□□□ -0.25
TM9SF2-201ENST00000376387 FSD1Q9BTV5 496 aa13.5□□□□□ -0.25
TM9SF2-201ENST00000376387 COL15A1P39059 1388 aa13.5□□□□□ -0.25
TM9SF2-201ENST00000376387 RGPD8O14715 1765 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms