RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ERICH4A6NGS2 130 aa16.89■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CDK11BP21127 795 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1B-201ENST00000376259 GPTP24298 496 aa16.89■□□□□ 0.29
TNFRSF1B-201ENST00000376259 PTPN21Q16825 1174 aa16.89■□□□□ 0.29
TNFRSF1B-201ENST00000376259 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
TNFRSF1B-201ENST00000376259 MYO3AQ8NEV4 1616 aa16.89■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ATP7BP35670 1465 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 MARCKSP29966 332 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TTC39AQ5SRH9 613 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 MTERF4Q7Z6M4 381 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 PDLIM2Q96JY6 352 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 A0A1B0GVL5 298 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 RGS12O14924 1447 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 EVA1CP58658 441 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 COL9A3Q14050 684 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 AOPEPQ8N6M6 819 aa16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 IP6K1Q92551 441 aa16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TRERF1Q96PN7 1200 aa16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TMEM2Q9UHN6 1383 aa16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 NAA30Q147X3 362 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ANKLE2Q86XL3 938 aa16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 LEO1Q8WVC0 666 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CLEC17AQ6ZS10 378 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ZNF496Q96IT1 587 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 USP6P35125 1406 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 GIGYF1O75420 1035 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 SERPINC1P01008 464 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 PTPN14Q15678 1187 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 BCL2L12Q9HB09 334 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 MROH1Q8NDA8 1641 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 SASH1O94885 1247 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 KRT32Q14532 448 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 AMOTQ4VCS5 1084 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CEP57L1Q8IYX8 460 aa16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 DDX19AQ9NUU7 478 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
TNFRSF1B-201ENST00000376259 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
TNFRSF1B-201ENST00000376259 SKILP12757 684 aa16.85■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ATF3P18847 181 aa16.85■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ARID5BQ14865 1188 aa16.85■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ZNF396Q96N95 335 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1B-201ENST00000376259 A2ML1A8K2U0 1454 aa16.85■□□□□ 0.29
TNFRSF1B-201ENST00000376259 GOLGA8BA8MQT2 603 aa16.85■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 PTPDC1A2A3K4 754 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TPM3P06753 285 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TMC6Q7Z403 805 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 MYRIPQ8NFW9 859 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 C8orf76Q96K31 380 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 TRIM29Q14134 588 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CFAP74Q9C0B2 1584 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ALDH1L1O75891 902 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 MICU3Q86XE3 530 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ZSWIM6Q9HCJ5 1215 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CNNM1Q9NRU3 951 aa16.84■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CCDC158Q5M9N0 1113 aa16.83■□□□□ 0.29
TNFRSF1B-201ENST00000376259 PRIMPOLQ96LW4 560 aa16.83■□□□□ 0.29
TNFRSF1B-201ENST00000376259 MAP2P11137 1827 aaKnown RBP16.83■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.29
TNFRSF1B-201ENST00000376259 ARHGEF10O15013 1369 aa16.83■□□□□ 0.29
TNFRSF1B-201ENST00000376259 CPSF1Q10570 1443 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ABCA9Q8IUA7 1624 aa16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 CFAP100Q494V2 611 aa16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 NUP133Q8WUM0 1156 aa16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 GPHNQ9NQX3 736 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 GJB4Q9NTQ9 266 aa16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ORC3Q9UBD5 711 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1B-201ENST00000376259 CRB1P82279 1406 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 KIAA1210Q9ULL0 1709 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ARAP3Q8WWN8 1544 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 MCMDC2Q4G0Z9 681 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ZNF790Q6PG37 636 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 MNS1Q8NEH6 495 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 VWDEQ8N2E2 1590 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 RASSF8Q8NHQ8 419 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 SKIDA1Q1XH10 827 aa16.82■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ZSWIM4Q9H7M6 989 aa16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 DBNLQ9UJU6 430 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 A1BGP04217 495 aa16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 NEO1Q92859 1461 aa16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 TTC14Q96N46 770 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms