RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 LTKP29376 864 aa21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 ZNF589Q86UQ0 364 aaPredicted RBP21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 PGBD1Q96JS3 809 aa21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 SETD1AO15047 1707 aaKnown RBP21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 KDRP35968 1356 aa21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 HOXC9P31274 260 aa21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 SH2B1Q9NRF2 756 aaPredicted RBP21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 TRMT1Q9NXH9 659 aaKnown RBP21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 NRXN3Q9Y4C0 1643 aa21.11■□□□□ 0.97
TUBGCP3-202ENST00000375669 SBNO1A3KN83 1393 aa21.11■□□□□ 0.97
TUBGCP3-202ENST00000375669 LEO1Q8WVC0 666 aaPredicted RBP21.11■□□□□ 0.97
TUBGCP3-202ENST00000375669 EAF2Q96CJ1 260 aaPredicted RBP21.11■□□□□ 0.97
TUBGCP3-202ENST00000375669 CHMP4AQ9BY43 222 aa21.11■□□□□ 0.97
TUBGCP3-202ENST00000375669 ELP1O95163 1332 aa21.11■□□□□ 0.97
TUBGCP3-202ENST00000375669 MPRIPQ6WCQ1 1025 aa21.11■□□□□ 0.97
TUBGCP3-202ENST00000375669 MAP3K2Q9Y2U5 619 aa21.11■□□□□ 0.97
TUBGCP3-202ENST00000375669 USP31Q70CQ4 1352 aa21.1■□□□□ 0.97
TUBGCP3-202ENST00000375669 H2AFXP16104 143 aaPredicted RBP21.1■□□□□ 0.97
TUBGCP3-202ENST00000375669 RBM43Q6ZSC3 357 aaKnown RBP21.1■□□□□ 0.97
TUBGCP3-202ENST00000375669 GTF3C6Q969F1 213 aa21.1■□□□□ 0.97
TUBGCP3-202ENST00000375669 ZSCAN31Q96LW9 406 aaPredicted RBP21.1■□□□□ 0.97
TUBGCP3-202ENST00000375669 XRN1Q8IZH2 1706 aaKnown RBP21.1■□□□□ 0.97
TUBGCP3-202ENST00000375669 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
TUBGCP3-202ENST00000375669 RAD51AP2Q09MP3 1159 aa21.1■□□□□ 0.97
TUBGCP3-202ENST00000375669 SKILP12757 684 aa21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 FILIP1Q7Z7B0 1213 aa21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 RBM33Q96EV2 1170 aaKnown RBP21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 FHOD1Q9Y613 1164 aa21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 ITSN1Q15811 1721 aa21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 EIF4A1P60842 406 aaKnown RBP21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 TOB2Q14106 344 aaPredicted RBP21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 DDX19AQ9NUU7 478 aaKnown RBP21.09■□□□□ 0.97
TUBGCP3-202ENST00000375669 HTATSF1O43719 755 aaKnown RBP21.08■□□□□ 0.97
TUBGCP3-202ENST00000375669 USP16Q9Y5T5 823 aa21.08■□□□□ 0.97
TUBGCP3-202ENST00000375669 ABTB2Q8N961 1025 aa21.08■□□□□ 0.96
TUBGCP3-202ENST00000375669 CLSTN2Q9H4D0 955 aa21.08■□□□□ 0.96
TUBGCP3-202ENST00000375669 C11orf57Q6ZUT1 292 aaPredicted RBP21.07■□□□□ 0.96
TUBGCP3-202ENST00000375669 MAP4K1Q92918 833 aa21.07■□□□□ 0.96
TUBGCP3-202ENST00000375669 SASH1O94885 1247 aa21.07■□□□□ 0.96
TUBGCP3-202ENST00000375669 IRX3P78415 501 aaPredicted RBP21.07■□□□□ 0.96
TUBGCP3-202ENST00000375669 CCDC129Q6ZRS4 1044 aa21.07■□□□□ 0.96
TUBGCP3-202ENST00000375669 TTC41PQ6P2S7 1318 aa21.07■□□□□ 0.96
TUBGCP3-202ENST00000375669 CCAR2Q8N163 923 aaKnown RBP21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 EVI5LQ96CN4 794 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 RGPD1P0DJD0 1748 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 ERCC6LQ2NKX8 1250 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 TAOK2Q9UL54 1235 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 ADCY9O60503 1353 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 AKAP12Q02952 1782 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 TTC21AQ8NDW8 1320 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 SARM1Q6SZW1 724 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 MRFAP1L1Q96HT8 127 aa21.06■□□□□ 0.96
TUBGCP3-202ENST00000375669 KIF2AO00139 706 aaPredicted RBP21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 PNMA6AP0CW24 399 aaPredicted RBP21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 PLA2G4AP47712 749 aa21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 BRF1Q92994 677 aa21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 SEC62Q99442 399 aaKnown RBP21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 TM6SF1Q9BZW5 370 aa21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 AMOTL2Q9Y2J4 779 aa21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 HSP90B1P14625 803 aaKnown RBP21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 CEBPAP49715 358 aaPredicted RBP21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 CLCN6P51797 869 aa21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 CCZ1BP86790 482 aa21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 CCZ1P86791 482 aaPredicted RBP21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 LRRC59Q96AG4 307 aaKnown RBP21.05■□□□□ 0.96
TUBGCP3-202ENST00000375669 CCDC69A6NI79 296 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 CAVIN2O95810 425 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 GUCY1B3Q02153 619 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 HSP90AB4PQ58FF6 505 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 BICC1Q9H694 974 aaKnown RBP21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 RPS6KB1P23443 525 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 TEX35Q5T0J7 233 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 SUCLG2Q96I99 432 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 SCAND2PQ9GZW5 306 aaPredicted RBP21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 KCND1Q9NSA2 647 aa21.04■□□□□ 0.96
TUBGCP3-202ENST00000375669 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 SETD1BQ9UPS6 1966 aaKnown RBP21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 GOLGA6L19H0YKK7 550 aa21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 NBPF6Q5VWK0 638 aa21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 GPATCH3Q96I76 525 aa21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 NBPF4Q96M43 638 aa21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 L2HGDHQ9H9P8 463 aa21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 H3BQV1 296 aa21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 IFFO2Q5TF58 517 aa21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.03■□□□□ 0.96
TUBGCP3-202ENST00000375669 FAM208AQ9UK61 1670 aaKnown RBP21.02■□□□□ 0.96
TUBGCP3-202ENST00000375669 TEFQ10587 303 aa21.02■□□□□ 0.96
TUBGCP3-202ENST00000375669 IQCB1Q15051 598 aa21.02■□□□□ 0.96
TUBGCP3-202ENST00000375669 CERS3Q8IU89 383 aa21.02■□□□□ 0.96
TUBGCP3-202ENST00000375669 TXLNBQ8N3L3 684 aa21.02■□□□□ 0.96
TUBGCP3-202ENST00000375669 KAZALD1Q96I82 304 aa21.02■□□□□ 0.96
TUBGCP3-202ENST00000375669 PDCP20941 246 aa21.01■□□□□ 0.95
TUBGCP3-202ENST00000375669 PIP4K2AP48426 406 aaPredicted RBP21.01■□□□□ 0.95
TUBGCP3-202ENST00000375669 MUM1L1Q5H9M0 696 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms