RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 NECAB1Q8N987 351 aa19.2■□□□□ 0.66
CNKSR1-202ENST00000374253 FAM89AQ96GI7 184 aa19.2■□□□□ 0.66
CNKSR1-202ENST00000374253 CYP46A1Q9Y6A2 500 aa19.2■□□□□ 0.66
CNKSR1-202ENST00000374253 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
CNKSR1-202ENST00000374253 HIP1O00291 1037 aa19.19■□□□□ 0.66
CNKSR1-202ENST00000374253 GPTP24298 496 aa19.19■□□□□ 0.66
CNKSR1-202ENST00000374253 COL15A1P39059 1388 aa19.19■□□□□ 0.66
CNKSR1-202ENST00000374253 CCDC191Q8NCU4 936 aa19.18■□□□□ 0.66
CNKSR1-202ENST00000374253 ZSWIM6Q9HCJ5 1215 aa19.18■□□□□ 0.66
CNKSR1-202ENST00000374253 RPAP1Q9BWH6 1393 aaPredicted RBP19.18■□□□□ 0.66
CNKSR1-202ENST00000374253 ZSCAN23Q3MJ62 389 aa19.18■□□□□ 0.66
CNKSR1-202ENST00000374253 TNS2Q63HR2 1409 aa19.17■□□□□ 0.66
CNKSR1-202ENST00000374253 GOLIM4O00461 696 aa19.17■□□□□ 0.66
CNKSR1-202ENST00000374253 NUP188Q5SRE5 1749 aa19.17■□□□□ 0.66
CNKSR1-202ENST00000374253 MED23Q9ULK4 1368 aa19.16■□□□□ 0.66
CNKSR1-202ENST00000374253 ME3Q16798 604 aa19.16■□□□□ 0.66
CNKSR1-202ENST00000374253 SMC3Q9UQE7 1217 aa19.16■□□□□ 0.66
CNKSR1-202ENST00000374253 TAF5LO75529 589 aa19.16■□□□□ 0.66
CNKSR1-202ENST00000374253 HLFQ16534 295 aa19.16■□□□□ 0.66
CNKSR1-202ENST00000374253 VPS53Q5VIR6 699 aa19.16■□□□□ 0.66
CNKSR1-202ENST00000374253 SLC4A9Q96Q91 983 aa19.16■□□□□ 0.66
CNKSR1-202ENST00000374253 TJP1Q07157 1748 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 ST3GAL1Q11201 340 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 TCIRG1Q13488 830 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 TMEM63CQ9P1W3 806 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 TPCN1Q9ULQ1 816 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 ZNF609O15014 1411 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 PAPPAQ13219 1627 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 GADD45BO75293 160 aaPredicted RBP19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 ADAMTS2O95450 1211 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 SYT1P21579 422 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 HAUS7Q99871 368 aa19.15■□□□□ 0.66
CNKSR1-202ENST00000374253 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.66
CNKSR1-202ENST00000374253 EYA2O00167 538 aa19.14■□□□□ 0.65
CNKSR1-202ENST00000374253 KIF6Q6ZMV9 814 aa19.14■□□□□ 0.65
CNKSR1-202ENST00000374253 KCNB2Q92953 911 aa19.14■□□□□ 0.65
CNKSR1-202ENST00000374253 ISCA1Q9BUE6 129 aa19.14■□□□□ 0.65
CNKSR1-202ENST00000374253 GJB2P29033 226 aa19.14■□□□□ 0.65
CNKSR1-202ENST00000374253 TCHHQ07283 1943 aa19.14■□□□□ 0.65
CNKSR1-202ENST00000374253 WDR33Q9C0J8 1336 aaKnown RBP19.13■□□□□ 0.65
CNKSR1-202ENST00000374253 A0A1B0GUL7 405 aa19.13■□□□□ 0.65
CNKSR1-202ENST00000374253 STK3Q13188 491 aa19.13■□□□□ 0.65
CNKSR1-202ENST00000374253 SNRKQ9NRH2 765 aa19.13■□□□□ 0.65
CNKSR1-202ENST00000374253 IL15P40933 162 aaPredicted RBP19.13■□□□□ 0.65
CNKSR1-202ENST00000374253 CCDC57Q2TAC2 916 aa19.13■□□□□ 0.65
CNKSR1-202ENST00000374253 TM6SF1Q9BZW5 370 aa19.13■□□□□ 0.65
CNKSR1-202ENST00000374253 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.13■□□□□ 0.65
CNKSR1-202ENST00000374253 SYCE3A1L190 88 aa19.12■□□□□ 0.65
CNKSR1-202ENST00000374253 STX6O43752 255 aa19.12■□□□□ 0.65
CNKSR1-202ENST00000374253 STARD3NLO95772 234 aa19.12■□□□□ 0.65
CNKSR1-202ENST00000374253 BLOC1S2Q6QNY1 142 aa19.12■□□□□ 0.65
CNKSR1-202ENST00000374253 CNPY2Q9Y2B0 182 aa19.12■□□□□ 0.65
CNKSR1-202ENST00000374253 ZBTB1Q9Y2K1 713 aa19.12■□□□□ 0.65
CNKSR1-202ENST00000374253 ADORA1P30542 326 aa19.12■□□□□ 0.65
CNKSR1-202ENST00000374253 PAG1Q9NWQ8 432 aa19.12■□□□□ 0.65
CNKSR1-202ENST00000374253 PRIM1P49642 420 aaKnown RBP19.11■□□□□ 0.65
CNKSR1-202ENST00000374253 RNF20Q5VTR2 975 aa19.11■□□□□ 0.65
CNKSR1-202ENST00000374253 USP48Q86UV5 1035 aa19.11■□□□□ 0.65
CNKSR1-202ENST00000374253 LRRC2Q9BYS8 371 aa19.11■□□□□ 0.65
CNKSR1-202ENST00000374253 RRAGDQ9NQL2 400 aaPredicted RBP19.11■□□□□ 0.65
CNKSR1-202ENST00000374253 TBC1D2BQ9UPU7 963 aa19.11■□□□□ 0.65
CNKSR1-202ENST00000374253 A0A0G2JLW4 131 aa19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 EXOC5O00471 708 aa19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 ZSCAN22P10073 491 aaPredicted RBP19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 FKBP4Q02790 459 aaKnown RBP eCLIP19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 TAF7LQ5H9L4 462 aa19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 KBTBD3Q8NAB2 608 aa19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 VPS37CA5D8V6 355 aaPredicted RBP19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 IFIT1P09914 478 aaKnown RBP19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 MCMDC2Q4G0Z9 681 aa19.1■□□□□ 0.65
CNKSR1-202ENST00000374253 RPS6KB1P23443 525 aa19.09■□□□□ 0.65
CNKSR1-202ENST00000374253 PSMA5P28066 241 aa19.09■□□□□ 0.65
CNKSR1-202ENST00000374253 NASPP49321 788 aaPredicted RBP19.09■□□□□ 0.65
CNKSR1-202ENST00000374253 ACSBG1Q96GR2 724 aa19.09■□□□□ 0.65
CNKSR1-202ENST00000374253 CEP126Q9P2H0 1117 aa19.09■□□□□ 0.65
CNKSR1-202ENST00000374253 ISY1Q9ULR0 285 aaKnown RBP19.09■□□□□ 0.65
CNKSR1-202ENST00000374253 ITGB4P16144 1822 aa19.09■□□□□ 0.65
CNKSR1-202ENST00000374253 FAM177BA6PVY3 158 aa19.08■□□□□ 0.65
CNKSR1-202ENST00000374253 FIBPO43427 364 aa19.08■□□□□ 0.65
CNKSR1-202ENST00000374253 CYP21A2P08686 494 aa19.08■□□□□ 0.65
CNKSR1-202ENST00000374253 TOB2Q14106 344 aaPredicted RBP19.08■□□□□ 0.65
CNKSR1-202ENST00000374253 HSP90AB3PQ58FF7 597 aa19.08■□□□□ 0.65
CNKSR1-202ENST00000374253 PI16Q6UXB8 463 aa19.08■□□□□ 0.65
CNKSR1-202ENST00000374253 RBSNQ9H1K0 784 aa19.08■□□□□ 0.65
CNKSR1-202ENST00000374253 MAP3K15Q6ZN16 1313 aa19.08■□□□□ 0.65
CNKSR1-202ENST00000374253 CYP19A1P11511 503 aaPredicted RBP19.08■□□□□ 0.64
CNKSR1-202ENST00000374253 ZNF445P59923 1031 aa19.08■□□□□ 0.64
CNKSR1-202ENST00000374253 GORABQ5T7V8 394 aa19.08■□□□□ 0.64
CNKSR1-202ENST00000374253 FERMT3Q86UX7 667 aa19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 TEX13AQ9BXU3 409 aaPredicted RBP19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 NUTM2BA6NNL0 878 aaPredicted RBP19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 NUTM2EB1AL46 878 aaPredicted RBP19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 F13A1P00488 732 aa19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 GIGYF2Q6Y7W6 1299 aaKnown RBP19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 NUTM2AQ8IVF1 878 aaPredicted RBP19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 VSIG10Q8N0Z9 540 aa19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 ZSCAN31Q96LW9 406 aaPredicted RBP19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 GREM2Q9H772 168 aa19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 SH2B1Q9NRF2 756 aaPredicted RBP19.07■□□□□ 0.64
CNKSR1-202ENST00000374253 PCCAP05165 728 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms