RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 UBE4AQ14139 1066 aa20.67■□□□□ 0.9
COL16A1-203ENST00000373672 FBXO31Q5XUX0 539 aaPredicted RBP20.67■□□□□ 0.9
COL16A1-203ENST00000373672 BRF1Q92994 677 aa20.67■□□□□ 0.9
COL16A1-203ENST00000373672 CTAGE1Q96RT6 745 aa20.67■□□□□ 0.9
COL16A1-203ENST00000373672 N4BP3O15049 544 aa20.67■□□□□ 0.9
COL16A1-203ENST00000373672 RBM25P49756 843 aaKnown RBP20.67■□□□□ 0.9
COL16A1-203ENST00000373672 PRPF4BQ13523 1007 aaKnown RBP20.67■□□□□ 0.9
COL16A1-203ENST00000373672 GIGYF2Q6Y7W6 1299 aaKnown RBP20.67■□□□□ 0.9
COL16A1-203ENST00000373672 NF2P35240 595 aa20.67■□□□□ 0.9
COL16A1-203ENST00000373672 GNG11P61952 73 aa20.67■□□□□ 0.9
COL16A1-203ENST00000373672 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
COL16A1-203ENST00000373672 ANKRD24Q8TF21 1146 aa20.67■□□□□ 0.9
COL16A1-203ENST00000373672 NBPF7P0C2Y1 421 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-203ENST00000373672 BMS1Q14692 1282 aaKnown RBP20.66■□□□□ 0.9
COL16A1-203ENST00000373672 MAATS1Q7Z4T9 603 aa20.66■□□□□ 0.9
COL16A1-203ENST00000373672 ADAMTS2O95450 1211 aa20.66■□□□□ 0.9
COL16A1-203ENST00000373672 TBCAO75347 108 aaKnown RBP20.66■□□□□ 0.9
COL16A1-203ENST00000373672 CCDC172P0C7W6 258 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 PPP4R3BQ5MIZ7 849 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 GIMAP6Q6P9H5 292 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 ANKRD13DQ6ZTN6 518 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 FEZ1Q99689 392 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 CNNM2Q9H8M5 875 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 ACEP12821 1306 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 HCLS1P14317 486 aaPredicted RBP20.65■□□□□ 0.9
COL16A1-203ENST00000373672 CCDC152Q4G0S7 254 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 RRAGBQ5VZM2 374 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 CKAP4Q07065 602 aaKnown RBP20.65■□□□□ 0.9
COL16A1-203ENST00000373672 TMTC2Q8N394 836 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 ZBTB43O43298 467 aa20.65■□□□□ 0.9
COL16A1-203ENST00000373672 DYNC1I1O14576 645 aa20.64■□□□□ 0.9
COL16A1-203ENST00000373672 UBASH3AP57075 661 aa20.64■□□□□ 0.9
COL16A1-203ENST00000373672 ERMNQ8TAM6 284 aa20.64■□□□□ 0.9
COL16A1-203ENST00000373672 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.64■□□□□ 0.9
COL16A1-203ENST00000373672 WDR78Q5VTH9 848 aa20.64■□□□□ 0.89
COL16A1-203ENST00000373672 NECAB1Q8N987 351 aa20.64■□□□□ 0.89
COL16A1-203ENST00000373672 ESYT1Q9BSJ8 1104 aa20.64■□□□□ 0.89
COL16A1-203ENST00000373672 ALG1Q9BT22 464 aa20.64■□□□□ 0.89
COL16A1-203ENST00000373672 FSD2A1L4K1 749 aa20.63■□□□□ 0.89
COL16A1-203ENST00000373672 PDE1AP54750 535 aa20.63■□□□□ 0.89
COL16A1-203ENST00000373672 CNPY2Q9Y2B0 182 aa20.63■□□□□ 0.89
COL16A1-203ENST00000373672 MYO1BO43795 1136 aa20.63■□□□□ 0.89
COL16A1-203ENST00000373672 GTF2F1P35269 517 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL16A1-203ENST00000373672 SPECC1LQ69YQ0 1117 aa20.63■□□□□ 0.89
COL16A1-203ENST00000373672 CEP112Q8N8E3 955 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 MRPS27Q92552 414 aaKnown RBP20.62■□□□□ 0.89
COL16A1-203ENST00000373672 RBM8AQ9Y5S9 174 aaKnown RBP20.62■□□□□ 0.89
COL16A1-203ENST00000373672 PPFIA3O75145 1194 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 ANO6Q4KMQ2 910 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 AKR1B10O60218 316 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 MEIS3Q99687 375 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 CHPF2Q9P2E5 772 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 SAMM50Q9Y512 469 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 STAT6P42226 847 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 TTLL12Q14166 644 aaPredicted RBP20.62■□□□□ 0.89
COL16A1-203ENST00000373672 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 HSF2BPO75031 334 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 CYLC1P35663 651 aaPredicted RBP20.62■□□□□ 0.89
COL16A1-203ENST00000373672 SPAG1Q07617 926 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 BBXQ8WY36 941 aaPredicted RBP20.62■□□□□ 0.89
COL16A1-203ENST00000373672 TBC1D5Q92609 795 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 ESR2Q92731 530 aa20.62■□□□□ 0.89
COL16A1-203ENST00000373672 ALDH1L1O75891 902 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 IFIT1BQ5T764 474 aaKnown RBP20.61■□□□□ 0.89
COL16A1-203ENST00000373672 ANKRD44Q8N8A2 993 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 ASXL1Q8IXJ9 1541 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 RTN1Q16799 776 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 CCDC174Q6PII3 467 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 TSPY3P0CV98 308 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 TSPY8P0CW00 308 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 USP48Q86UV5 1035 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 DDX12PQ92771 950 aa20.61■□□□□ 0.89
COL16A1-203ENST00000373672 ZNF219Q9P2Y4 722 aaPredicted RBP20.6■□□□□ 0.89
COL16A1-203ENST00000373672 FAM200AQ8TCP9 573 aa20.6■□□□□ 0.89
COL16A1-203ENST00000373672 SLC4A4Q9Y6R1 1079 aa20.6■□□□□ 0.89
COL16A1-203ENST00000373672 JARID2Q92833 1246 aaPredicted RBP20.6■□□□□ 0.89
COL16A1-203ENST00000373672 FERMT1Q9BQL6 677 aa20.6■□□□□ 0.89
COL16A1-203ENST00000373672 ATP8B2P98198 1209 aa20.6■□□□□ 0.89
COL16A1-203ENST00000373672 MRPL50Q8N5N7 158 aaKnown RBP20.6■□□□□ 0.89
COL16A1-203ENST00000373672 AFMP43652 599 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 KIAA0753Q2KHM9 967 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 SLC4A8Q2Y0W8 1093 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 Q6ZUG5 572 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 ZGPATQ8N5A5 531 aaKnown RBP20.59■□□□□ 0.89
COL16A1-203ENST00000373672 PUF60Q9UHX1 559 aaKnown RBP20.59■□□□□ 0.89
COL16A1-203ENST00000373672 GRIN2AQ12879 1464 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 CYP7A1P22680 504 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 LMAN1P49257 510 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 ST5P78524 1137 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 DENND4BO75064 1496 aaPredicted RBP20.59■□□□□ 0.89
COL16A1-203ENST00000373672 SNX21Q969T3 373 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 HOMER2Q9NSB8 354 aa20.59■□□□□ 0.89
COL16A1-203ENST00000373672 F13A1P00488 732 aa20.58■□□□□ 0.89
COL16A1-203ENST00000373672 ANXA1P04083 346 aa20.58■□□□□ 0.89
COL16A1-203ENST00000373672 ATP2B3Q16720 1220 aa20.58■□□□□ 0.89
COL16A1-203ENST00000373672 BICD1Q96G01 975 aa20.58■□□□□ 0.89
COL16A1-203ENST00000373672 GNAQP50148 359 aa20.58■□□□□ 0.89
COL16A1-203ENST00000373672 PLVAPQ9BX97 442 aa20.58■□□□□ 0.89
COL16A1-203ENST00000373672 ZSWIM4Q9H7M6 989 aa20.58■□□□□ 0.89
COL16A1-203ENST00000373672 TRAF1Q13077 416 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms