RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 TNNI3KQ59H18 835 aa19.87■□□□□ 0.77
PCIF1-201ENST00000372409 IFNL2Q8IZJ0 200 aa19.87■□□□□ 0.77
PCIF1-201ENST00000372409 FPGT-TNNI3KV9GXZ4 949 aa19.87■□□□□ 0.77
PCIF1-201ENST00000372409 TAF5LO75529 589 aa19.87■□□□□ 0.77
PCIF1-201ENST00000372409 TTC12Q9H892 705 aaPredicted RBP19.87■□□□□ 0.77
PCIF1-201ENST00000372409 CAMTA1Q9Y6Y1 1673 aa19.87■□□□□ 0.77
PCIF1-201ENST00000372409 KDM4AO75164 1064 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 CHGBP05060 677 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 PTPN12Q05209 780 aaKnown RBP19.86■□□□□ 0.77
PCIF1-201ENST00000372409 CCDC129Q6ZRS4 1044 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 COPRSQ9NQ92 184 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 HMG20BQ9P0W2 317 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 A0A087WZG4 1122 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 CAMK4Q16566 473 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 CABLES1Q8TDN4 633 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 FUCA2Q9BTY2 467 aa19.86■□□□□ 0.77
PCIF1-201ENST00000372409 TFIP11Q9UBB9 837 aaKnown RBP19.86■□□□□ 0.77
PCIF1-201ENST00000372409 TRPM3Q9HCF6 1732 aaPredicted RBP19.85■□□□□ 0.77
PCIF1-201ENST00000372409 GOLGA6L4A6NEF3 574 aa19.85■□□□□ 0.77
PCIF1-201ENST00000372409 ATP5JP18859 108 aa19.85■□□□□ 0.77
PCIF1-201ENST00000372409 CHRNA2Q15822 529 aa19.85■□□□□ 0.77
PCIF1-201ENST00000372409 SEC62Q99442 399 aaKnown RBP19.85■□□□□ 0.77
PCIF1-201ENST00000372409 FAM13BQ9NYF5 915 aa19.85■□□□□ 0.77
PCIF1-201ENST00000372409 ZNF142P52746 1687 aaPredicted RBP19.85■□□□□ 0.77
PCIF1-201ENST00000372409 HSP90B1P14625 803 aaKnown RBP19.84■□□□□ 0.77
PCIF1-201ENST00000372409 GLIPR1L2Q4G1C9 344 aa19.84■□□□□ 0.77
PCIF1-201ENST00000372409 DBNDD2Q9BQY9 259 aa19.84■□□□□ 0.77
PCIF1-201ENST00000372409 CCDC192P0DO97 292 aa19.84■□□□□ 0.77
PCIF1-201ENST00000372409 FMNL2Q96PY5 1086 aa19.84■□□□□ 0.77
PCIF1-201ENST00000372409 C1orf167Q5SNV9 1468 aa19.84■□□□□ 0.77
PCIF1-201ENST00000372409 MEGF6O75095 1541 aa19.84■□□□□ 0.77
PCIF1-201ENST00000372409 SCN11AQ9UI33 1791 aa19.84■□□□□ 0.77
PCIF1-201ENST00000372409 LIG1P18858 919 aa19.83■□□□□ 0.77
PCIF1-201ENST00000372409 RFX5P48382 616 aaPredicted RBP19.83■□□□□ 0.77
PCIF1-201ENST00000372409 DDX46Q7L014 1031 aaKnown RBP19.83■□□□□ 0.77
PCIF1-201ENST00000372409 ADAMTS7Q9UKP4 1686 aa19.83■□□□□ 0.77
PCIF1-201ENST00000372409 NEK1Q96PY6 1258 aa19.83■□□□□ 0.76
PCIF1-201ENST00000372409 SPATA32Q96LK8 384 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 NUP62CLQ9H1M0 184 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 JAK2O60674 1132 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 CABP4P57796 275 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 FGD1P98174 961 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 KRT32Q14532 448 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 SASS6Q6UVJ0 657 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 C17orf53Q8N3J3 647 aaPredicted RBP19.82■□□□□ 0.76
PCIF1-201ENST00000372409 C19orf44Q9H6X5 657 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 COL15A1P39059 1388 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 CYP27B1O15528 508 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 PDIA4P13667 645 aaKnown RBP19.82■□□□□ 0.76
PCIF1-201ENST00000372409 LRP10Q7Z4F1 713 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 DCAF5Q96JK2 942 aa19.82■□□□□ 0.76
PCIF1-201ENST00000372409 MAP3K11Q16584 847 aa19.81■□□□□ 0.76
PCIF1-201ENST00000372409 LMBR1LQ6UX01 489 aa19.81■□□□□ 0.76
PCIF1-201ENST00000372409 Q6ZUG5 572 aa19.81■□□□□ 0.76
PCIF1-201ENST00000372409 LRRC2Q9BYS8 371 aa19.81■□□□□ 0.76
PCIF1-201ENST00000372409 MRC1P22897 1456 aa19.81■□□□□ 0.76
PCIF1-201ENST00000372409 CKAP2LQ8IYA6 745 aa19.81■□□□□ 0.76
PCIF1-201ENST00000372409 NEUROD6Q96NK8 337 aa19.81■□□□□ 0.76
PCIF1-201ENST00000372409 ZNF609O15014 1411 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 AP5Z1O43299 807 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 TSGA10IPQ3SY00 556 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 SPC24Q8NBT2 197 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 DDX11Q96FC9 970 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 SCAND2PQ9GZW5 306 aaPredicted RBP19.8■□□□□ 0.76
PCIF1-201ENST00000372409 ALDH8A1Q9H2A2 487 aaPredicted RBP19.8■□□□□ 0.76
PCIF1-201ENST00000372409 AFDNP55196 1824 aaKnown RBP19.8■□□□□ 0.76
PCIF1-201ENST00000372409 MCMDC2Q4G0Z9 681 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 USPL1Q5W0Q7 1092 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 PIBF1Q8WXW3 757 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 PDCL3Q9H2J4 239 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 DACT1Q9NYF0 836 aa19.8■□□□□ 0.76
PCIF1-201ENST00000372409 U3KPZ7 1027 aaPredicted RBP19.8■□□□□ 0.76
PCIF1-201ENST00000372409 JCADQ9P266 1359 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 ELP1O95163 1332 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 ATF3P18847 181 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 NOLC1Q14978 699 aaKnown RBP eCLIP19.79■□□□□ 0.76
PCIF1-201ENST00000372409 RABL6Q3YEC7 729 aaPredicted RBP19.79■□□□□ 0.76
PCIF1-201ENST00000372409 TNMDQ9H2S6 317 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 H3BQV1 296 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 CYP21A2P08686 494 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 IFFO2Q5TF58 517 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 GTF3C6Q969F1 213 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.79■□□□□ 0.76
PCIF1-201ENST00000372409 LMTK3Q96Q04 1460 aa19.79■□□□□ 0.76
PCIF1-201ENST00000372409 HAUS7Q99871 368 aa19.78■□□□□ 0.76
PCIF1-201ENST00000372409 FOSBP53539 338 aa19.78■□□□□ 0.76
PCIF1-201ENST00000372409 SLFNL1Q499Z3 407 aa19.78■□□□□ 0.76
PCIF1-201ENST00000372409 BICD2Q8TD16 824 aa19.78■□□□□ 0.76
PCIF1-201ENST00000372409 LEO1Q8WVC0 666 aaPredicted RBP19.78■□□□□ 0.76
PCIF1-201ENST00000372409 BRF1Q92994 677 aa19.78■□□□□ 0.76
PCIF1-201ENST00000372409 TYRO3Q06418 890 aa19.77■□□□□ 0.76
PCIF1-201ENST00000372409 PLBD2Q8NHP8 589 aa19.77■□□□□ 0.76
PCIF1-201ENST00000372409 GOLIM4O00461 696 aa19.77■□□□□ 0.76
PCIF1-201ENST00000372409 KIF1AQ12756 1690 aa19.76■□□□□ 0.75
PCIF1-201ENST00000372409 LUZP1Q86V48 1076 aa19.76■□□□□ 0.75
PCIF1-201ENST00000372409 FAM200AQ8TCP9 573 aa19.76■□□□□ 0.75
PCIF1-201ENST00000372409 TIMM10P62072 90 aa19.75■□□□□ 0.75
PCIF1-201ENST00000372409 NAP1L2Q9ULW6 460 aaPredicted RBP19.75■□□□□ 0.75
PCIF1-201ENST00000372409 MRVI1Q9Y6F6 885 aa19.75■□□□□ 0.75
PCIF1-201ENST00000372409 CEBPZQ03701 1054 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms