RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 USP25Q9UHP3 1055 aa27.24■■□□□ 1.95
BRD3-202ENST00000371834 A0A087WZG4 1122 aa27.24■■□□□ 1.95
BRD3-202ENST00000371834 ATF3P18847 181 aa27.24■■□□□ 1.95
BRD3-202ENST00000371834 FAM173BQ6P4H8 233 aa27.24■■□□□ 1.95
BRD3-202ENST00000371834 ATP5JP18859 108 aa27.23■■□□□ 1.95
BRD3-202ENST00000371834 FAM184AQ8NB25 1140 aa27.23■■□□□ 1.95
BRD3-202ENST00000371834 STK3Q13188 491 aa27.23■■□□□ 1.95
BRD3-202ENST00000371834 DNAJC2Q99543 621 aaKnown RBP27.23■■□□□ 1.95
BRD3-202ENST00000371834 DBNDD2Q9BQY9 259 aa27.23■■□□□ 1.95
BRD3-202ENST00000371834 LETM1O95202 739 aaPredicted RBP27.22■■□□□ 1.95
BRD3-202ENST00000371834 CCDC9Q9Y3X0 531 aaKnown RBP27.22■■□□□ 1.95
BRD3-202ENST00000371834 JCADQ9P266 1359 aa27.22■■□□□ 1.95
BRD3-202ENST00000371834 COL18A1P39060 1754 aa27.22■■□□□ 1.95
BRD3-202ENST00000371834 TPM2P07951 284 aa27.22■■□□□ 1.95
BRD3-202ENST00000371834 RABL6Q3YEC7 729 aaPredicted RBP27.22■■□□□ 1.95
BRD3-202ENST00000371834 CCDC129Q6ZRS4 1044 aa27.22■■□□□ 1.95
BRD3-202ENST00000371834 CABP4P57796 275 aa27.21■■□□□ 1.95
BRD3-202ENST00000371834 CSPP1Q1MSJ5 1256 aa27.21■■□□□ 1.95
BRD3-202ENST00000371834 SEC62Q99442 399 aaKnown RBP27.21■■□□□ 1.95
BRD3-202ENST00000371834 R3HCC1Q9Y3T6 440 aaKnown RBP27.21■■□□□ 1.95
BRD3-202ENST00000371834 AFDNP55196 1824 aaKnown RBP27.21■■□□□ 1.95
BRD3-202ENST00000371834 MCM5P33992 734 aa27.21■■□□□ 1.95
BRD3-202ENST00000371834 UVSSAQ2YD98 709 aa27.2■■□□□ 1.95
BRD3-202ENST00000371834 ANKRD1Q15327 319 aa27.2■■□□□ 1.94
BRD3-202ENST00000371834 TTC6Q86TZ1 520 aa27.19■■□□□ 1.94
BRD3-202ENST00000371834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.19■■□□□ 1.943e-6■■■■■ 28.2
BRD3-202ENST00000371834 FUCA2Q9BTY2 467 aa27.19■■□□□ 1.94
BRD3-202ENST00000371834 HMG20BQ9P0W2 317 aa27.19■■□□□ 1.94
BRD3-202ENST00000371834 CASP7P55210 303 aa27.18■■□□□ 1.94
BRD3-202ENST00000371834 DDX46Q7L014 1031 aaKnown RBP27.18■■□□□ 1.94
BRD3-202ENST00000371834 TMEM94Q12767 1356 aa27.18■■□□□ 1.94
BRD3-202ENST00000371834 ZNF609O15014 1411 aa27.18■■□□□ 1.94
BRD3-202ENST00000371834 TSGA10IPQ3SY00 556 aa27.18■■□□□ 1.94
BRD3-202ENST00000371834 USPL1Q5W0Q7 1092 aa27.18■■□□□ 1.94
BRD3-202ENST00000371834 LMBR1LQ6UX01 489 aa27.18■■□□□ 1.94
BRD3-202ENST00000371834 CHMP3Q9Y3E7 222 aa27.18■■□□□ 1.94
BRD3-202ENST00000371834 ARFGEF2Q9Y6D5 1785 aa27.17■■□□□ 1.94
BRD3-202ENST00000371834 ADCY5O95622 1261 aa27.17■■□□□ 1.94
BRD3-202ENST00000371834 ALDH8A1Q9H2A2 487 aaPredicted RBP27.17■■□□□ 1.94
BRD3-202ENST00000371834 PLBD2Q8NHP8 589 aa27.17■■□□□ 1.94
BRD3-202ENST00000371834 ZNF830Q96NB3 372 aaPredicted RBP27.16■■□□□ 1.94
BRD3-202ENST00000371834 KRT85P78386 507 aa27.16■■□□□ 1.94
BRD3-202ENST00000371834 NBPF26B4DH59 902 aa27.15■■□□□ 1.94
BRD3-202ENST00000371834 NBPF14Q5TI25 921 aa27.15■■□□□ 1.94
BRD3-202ENST00000371834 NBPF10Q6P3W6 841 aaKnown RBP27.15■■□□□ 1.94
BRD3-202ENST00000371834 NBPF15Q8N660 670 aa27.15■■□□□ 1.94
BRD3-202ENST00000371834 PDCP20941 246 aa27.15■■□□□ 1.94
BRD3-202ENST00000371834 HAUS7Q99871 368 aa27.15■■□□□ 1.94
BRD3-202ENST00000371834 SLFNL1Q499Z3 407 aa27.14■■□□□ 1.94
BRD3-202ENST00000371834 NEK1Q96PY6 1258 aa27.14■■□□□ 1.94
BRD3-202ENST00000371834 JAK2O60674 1132 aa27.14■■□□□ 1.93
BRD3-202ENST00000371834 FOXO4P98177 505 aa27.13■■□□□ 1.93
BRD3-202ENST00000371834 TTLL7Q6ZT98 887 aa27.13■■□□□ 1.93
BRD3-202ENST00000371834 TFIP11Q9UBB9 837 aaKnown RBP27.13■■□□□ 1.93
BRD3-202ENST00000371834 CYP21A2P08686 494 aa27.13■■□□□ 1.93
BRD3-202ENST00000371834 HSP90AA2PQ14568 343 aaPredicted RBP27.13■■□□□ 1.93
BRD3-202ENST00000371834 LIG1P18858 919 aa27.12■■□□□ 1.93
BRD3-202ENST00000371834 MCMDC2Q4G0Z9 681 aa27.12■■□□□ 1.93
BRD3-202ENST00000371834 GLI3P10071 1580 aa27.12■■□□□ 1.93
BRD3-202ENST00000371834 KDM4AO75164 1064 aa27.12■■□□□ 1.93
BRD3-202ENST00000371834 PLCB2Q00722 1185 aa27.12■■□□□ 1.93
BRD3-202ENST00000371834 KRT32Q14532 448 aa27.12■■□□□ 1.93
BRD3-202ENST00000371834 Q6ZUG5 572 aa27.11■■□□□ 1.93
BRD3-202ENST00000371834 NEUROD6Q96NK8 337 aa27.11■■□□□ 1.93
BRD3-202ENST00000371834 LRRC2Q9BYS8 371 aa27.11■■□□□ 1.93
BRD3-202ENST00000371834 TNS3Q68CZ2 1445 aa27.11■■□□□ 1.93
BRD3-202ENST00000371834 PKD1L3Q7Z443 1732 aa27.11■■□□□ 1.93
BRD3-202ENST00000371834 AP5Z1O43299 807 aa27.1■■□□□ 1.93
BRD3-202ENST00000371834 CAMK4Q16566 473 aa27.1■■□□□ 1.93
BRD3-202ENST00000371834 U3KPZ7 1027 aaPredicted RBP27.1■■□□□ 1.93
BRD3-202ENST00000371834 ABCC6O95255 1503 aa27.1■■□□□ 1.93
BRD3-202ENST00000371834 H7C1W4 665 aa27.1■■□□□ 1.93
BRD3-202ENST00000371834 ATG9AQ7Z3C6 839 aa27.1■■□□□ 1.93
BRD3-202ENST00000371834 GTF3C6Q969F1 213 aa27.1■■□□□ 1.93
BRD3-202ENST00000371834 TIMM10P62072 90 aa27.09■■□□□ 1.93
BRD3-202ENST00000371834 KIAA2012Q0VF49 1180 aa27.09■■□□□ 1.93
BRD3-202ENST00000371834 KBTBD3Q8NAB2 608 aa27.09■■□□□ 1.93
BRD3-202ENST00000371834 TTC12Q9H892 705 aaPredicted RBP27.09■■□□□ 1.93
BRD3-202ENST00000371834 GOLIM4O00461 696 aa27.08■■□□□ 1.93
BRD3-202ENST00000371834 RRP9O43818 475 aaKnown RBP27.08■■□□□ 1.93
BRD3-202ENST00000371834 PDIA4P13667 645 aaKnown RBP27.08■■□□□ 1.93
BRD3-202ENST00000371834 HSP90B1P14625 803 aaKnown RBP27.08■■□□□ 1.93
BRD3-202ENST00000371834 ELP1O95163 1332 aa27.08■■□□□ 1.93
BRD3-202ENST00000371834 A1BGP04217 495 aa27.08■■□□□ 1.92
BRD3-202ENST00000371834 TERF1P54274 439 aa27.08■■□□□ 1.92
BRD3-202ENST00000371834 STOX1Q6ZVD7 989 aa27.08■■□□□ 1.92
BRD3-202ENST00000371834 RFX7Q2KHR2 1363 aa27.07■■□□□ 1.92
BRD3-202ENST00000371834 SPATA32Q96LK8 384 aa27.07■■□□□ 1.92
BRD3-202ENST00000371834 SPATA31A3Q5VYP0 1347 aa27.07■■□□□ 1.92
BRD3-202ENST00000371834 DDX11Q96FC9 970 aa27.07■■□□□ 1.92
BRD3-202ENST00000371834 BRF1Q92994 677 aa27.06■■□□□ 1.92
BRD3-202ENST00000371834 ZNF594Q96JF6 807 aaPredicted RBP27.06■■□□□ 1.92
BRD3-202ENST00000371834 ZBTB3Q9H5J0 574 aa27.06■■□□□ 1.92
BRD3-202ENST00000371834 STRCP1A6NGW2 1772 aa27.06■■□□□ 1.92
BRD3-202ENST00000371834 LEO1Q8WVC0 666 aaPredicted RBP27.06■■□□□ 1.92
BRD3-202ENST00000371834 NUP62CLQ9H1M0 184 aa27.06■■□□□ 1.92
BRD3-202ENST00000371834 CWC25Q9NXE8 425 aaPredicted RBP27.06■■□□□ 1.92
BRD3-202ENST00000371834 LAMB4A4D0S4 1761 aa27.05■■□□□ 1.92
BRD3-202ENST00000371834 CCDC192P0DO97 292 aa27.05■■□□□ 1.92
BRD3-202ENST00000371834 LRRC24Q50LG9 513 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms