RNA–Protein interactions for RNA: ENST00000369063.7

RTN4IP1-201, Transcript of reticulon 4 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4IP1, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-201ENST00000369063 CACNA1SQ13698 1873 aa19.33■□□□□ 0.68
RTN4IP1-201ENST00000369063 CTSWP56202 376 aa19.33■□□□□ 0.68
RTN4IP1-201ENST00000369063 GRAPQ13588 217 aa19.33■□□□□ 0.68
RTN4IP1-201ENST00000369063 OLFM4Q6UX06 510 aa19.33■□□□□ 0.68
RTN4IP1-201ENST00000369063 GRAPLQ8TC17 118 aaPredicted RBP19.33■□□□□ 0.68
RTN4IP1-201ENST00000369063 FRAT1Q92837 279 aaPredicted RBP19.33■□□□□ 0.68
RTN4IP1-201ENST00000369063 NFKBIEO00221 500 aa19.32■□□□□ 0.68
RTN4IP1-201ENST00000369063 PPEF1O14829 653 aaPredicted RBP19.32■□□□□ 0.68
RTN4IP1-201ENST00000369063 TRIM27P14373 513 aa19.32■□□□□ 0.68
RTN4IP1-201ENST00000369063 CCT4P50991 539 aaKnown RBP19.32■□□□□ 0.68
RTN4IP1-201ENST00000369063 CCDC93Q567U6 631 aa19.32■□□□□ 0.68
RTN4IP1-201ENST00000369063 CC2D2BQ6DHV5 1058 aa19.32■□□□□ 0.68
RTN4IP1-201ENST00000369063 UTYO14607 1347 aa19.32■□□□□ 0.68
RTN4IP1-201ENST00000369063 NBPF7P0C2Y1 421 aaPredicted RBP19.31■□□□□ 0.68
RTN4IP1-201ENST00000369063 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
RTN4IP1-201ENST00000369063 RTKN2Q8IZC4 609 aa19.31■□□□□ 0.68
RTN4IP1-201ENST00000369063 CELF1Q92879 486 aaKnown RBP19.31■□□□□ 0.68
RTN4IP1-201ENST00000369063 ATP6V0A2Q9Y487 856 aa19.31■□□□□ 0.68
RTN4IP1-201ENST00000369063 YY1P25490 414 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 CCDC85AQ96PX6 553 aaPredicted RBP19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 USP44Q9H0E7 712 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 SEC31BQ9NQW1 1179 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 CSF1RP07333 972 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 RPS8P62241 208 aaKnown RBP19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 RASSF7Q02833 373 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 GRIPAP1Q4V328 841 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 SP8Q8IXZ3 490 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 TAOK3Q9H2K8 898 aa19.3■□□□□ 0.68
RTN4IP1-201ENST00000369063 LTBP3Q9NS15 1303 aa19.29■□□□□ 0.68
RTN4IP1-201ENST00000369063 FOXO4P98177 505 aa19.29■□□□□ 0.68
RTN4IP1-201ENST00000369063 TMX4Q9H1E5 349 aaPredicted RBP19.29■□□□□ 0.68
RTN4IP1-201ENST00000369063 GREM2Q9H772 168 aa19.29■□□□□ 0.68
RTN4IP1-201ENST00000369063 FER1L6Q2WGJ9 1857 aa19.29■□□□□ 0.68
RTN4IP1-201ENST00000369063 RTL9Q8NET4 1388 aa19.28■□□□□ 0.68
RTN4IP1-201ENST00000369063 LMNB1P20700 586 aa19.28■□□□□ 0.68
RTN4IP1-201ENST00000369063 TAF1P21675 1872 aa19.28■□□□□ 0.68
RTN4IP1-201ENST00000369063 PRELPP51888 382 aa19.28■□□□□ 0.68
RTN4IP1-201ENST00000369063 INTS3Q68E01 1043 aaKnown RBP19.28■□□□□ 0.68
RTN4IP1-201ENST00000369063 SLC51AQ86UW1 340 aa19.28■□□□□ 0.68
RTN4IP1-201ENST00000369063 SNED1Q8TER0 1413 aa19.28■□□□□ 0.68
RTN4IP1-201ENST00000369063 C9orf131Q5VYM1 1079 aa19.27■□□□□ 0.68
RTN4IP1-201ENST00000369063 FKBP4Q02790 459 aaKnown RBP eCLIP19.27■□□□□ 0.67
RTN4IP1-201ENST00000369063 EPHA10Q5JZY3 1008 aa19.27■□□□□ 0.67
RTN4IP1-201ENST00000369063 KAZALD1Q96I82 304 aa19.27■□□□□ 0.67
RTN4IP1-201ENST00000369063 PSMD1Q99460 953 aa19.27■□□□□ 0.67
RTN4IP1-201ENST00000369063 RCAN3Q9UKA8 241 aa19.27■□□□□ 0.67
RTN4IP1-201ENST00000369063 MYH3P11055 1940 aa19.26■□□□□ 0.67
RTN4IP1-201ENST00000369063 CLUAP1Q96AJ1 413 aa19.26■□□□□ 0.67
RTN4IP1-201ENST00000369063 CDC5LQ99459 802 aaKnown RBP19.26■□□□□ 0.67
RTN4IP1-201ENST00000369063 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
RTN4IP1-201ENST00000369063 COL4A1P02462 1669 aa19.25■□□□□ 0.67
RTN4IP1-201ENST00000369063 ITGA6P23229 1130 aa19.25■□□□□ 0.67
RTN4IP1-201ENST00000369063 FAM161AQ3B820 660 aa19.25■□□□□ 0.67
RTN4IP1-201ENST00000369063 SUCLG2Q96I99 432 aa19.25■□□□□ 0.67
RTN4IP1-201ENST00000369063 RNF181Q9P0P0 153 aa19.25■□□□□ 0.67
RTN4IP1-201ENST00000369063 SBF1O95248 1867 aa19.25■□□□□ 0.67
RTN4IP1-201ENST00000369063 LMBR1LQ6UX01 489 aa19.24■□□□□ 0.67
RTN4IP1-201ENST00000369063 ANKRD18AQ8IVF6 992 aa19.24■□□□□ 0.67
RTN4IP1-201ENST00000369063 MPNDQ8N594 471 aa19.23■□□□□ 0.67
RTN4IP1-201ENST00000369063 BICC1Q9H694 974 aaKnown RBP19.23■□□□□ 0.67
RTN4IP1-201ENST00000369063 BSDC1Q9NW68 430 aaPredicted RBP19.23■□□□□ 0.67
RTN4IP1-201ENST00000369063 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
RTN4IP1-201ENST00000369063 RABL6Q3YEC7 729 aaPredicted RBP19.22■□□□□ 0.67
RTN4IP1-201ENST00000369063 DPP8Q6V1X1 898 aaPredicted RBP19.22■□□□□ 0.67
RTN4IP1-201ENST00000369063 RTFDC1Q9BY42 306 aaPredicted RBP19.22■□□□□ 0.67
RTN4IP1-201ENST00000369063 ZNF277Q9NRM2 450 aaPredicted RBP19.22■□□□□ 0.67
RTN4IP1-201ENST00000369063 NSFL1CQ9UNZ2 370 aaKnown RBP19.22■□□□□ 0.67
RTN4IP1-201ENST00000369063 ANKRD18BA2A2Z9 1011 aa19.21■□□□□ 0.67
RTN4IP1-201ENST00000369063 UBTFL1P0CB47 393 aaPredicted RBP19.21■□□□□ 0.67
RTN4IP1-201ENST00000369063 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
RTN4IP1-201ENST00000369063 DZIP1LQ8IYY4 767 aaKnown RBP19.21■□□□□ 0.67
RTN4IP1-201ENST00000369063 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
RTN4IP1-201ENST00000369063 CHMP3Q9Y3E7 222 aa19.21■□□□□ 0.67
RTN4IP1-201ENST00000369063 IGHMBP2P38935 993 aaKnown RBP19.2■□□□□ 0.66
RTN4IP1-201ENST00000369063 CCDC57Q2TAC2 916 aa19.2■□□□□ 0.66
RTN4IP1-201ENST00000369063 MEIS3Q99687 375 aa19.2■□□□□ 0.66
RTN4IP1-201ENST00000369063 LRRC37AA6NMS7 1700 aa19.2■□□□□ 0.66
RTN4IP1-201ENST00000369063 ZC3H4Q9UPT8 1303 aaKnown RBP19.2■□□□□ 0.66
RTN4IP1-201ENST00000369063 IARSP41252 1262 aaKnown RBP19.2■□□□□ 0.66
RTN4IP1-201ENST00000369063 ANKRD44Q8N8A2 993 aa19.2■□□□□ 0.66
RTN4IP1-201ENST00000369063 HDAC5Q9UQL6 1122 aa19.2■□□□□ 0.66
RTN4IP1-201ENST00000369063 RLBP1P12271 317 aa19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 GPSM2P81274 684 aa19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 ZNF784Q8NCA9 323 aaPredicted RBP19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 SUPT20HQ8NEM7 779 aa19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 MPHOSPH8Q99549 860 aa19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 VPS33BQ9H267 617 aa19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 PODXL2Q9NZ53 605 aa19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 MINPP1Q9UNW1 487 aa19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 CCDC88AQ3V6T2 1871 aa19.19■□□□□ 0.66
RTN4IP1-201ENST00000369063 GNAI3P08754 354 aa19.18■□□□□ 0.66
RTN4IP1-201ENST00000369063 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
RTN4IP1-201ENST00000369063 POLLQ9UGP5 575 aa19.17■□□□□ 0.66
RTN4IP1-201ENST00000369063 MS4A1P11836 297 aa19.17■□□□□ 0.66
RTN4IP1-201ENST00000369063 LRRFIP2Q9Y608 721 aaKnown RBP19.17■□□□□ 0.66
RTN4IP1-201ENST00000369063 PLIN1O60240 522 aa19.16■□□□□ 0.66
RTN4IP1-201ENST00000369063 TBC1D16Q8TBP0 767 aa19.16■□□□□ 0.66
RTN4IP1-201ENST00000369063 JDP2Q8WYK2 163 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms