RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 NCOA7Q8NI08 942 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 EXOC6BQ9Y2D4 811 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 C3P01024 1663 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 FAM177A1Q8N128 213 aaPredicted RBP8.49□□□□□ -1.05
VTA1-202ENST00000367630 DMRT2Q9Y5R5 561 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 SLC5A1P13866 664 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 MAP9Q49MG5 647 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 CWC27Q6UX04 472 aaKnown RBP8.49□□□□□ -1.05
VTA1-202ENST00000367630 HSP90B2PQ58FF3 399 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 SLF2Q8IX21 1173 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 CCDC12Q8WUD4 166 aaPredicted RBP8.49□□□□□ -1.05
VTA1-202ENST00000367630 IL17RAQ96F46 866 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 STK24Q9Y6E0 443 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 WASHC4Q2M389 1173 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
VTA1-202ENST00000367630 HOMER1Q86YM7 354 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 FAM114A1Q8IWE2 563 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 NAP1L4Q99733 375 aaKnown RBP8.48□□□□□ -1.05
VTA1-202ENST00000367630 MAGEC2Q9UBF1 373 aaPredicted RBP8.48□□□□□ -1.05
VTA1-202ENST00000367630 MAP3K2Q9Y2U5 619 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 AKAP12Q02952 1782 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 TRAF1Q13077 416 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 EYA1Q99502 592 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 USP19O94966 1318 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 NOL8Q76FK4 1167 aaKnown RBP8.48□□□□□ -1.05
VTA1-202ENST00000367630 A6NNZ2 444 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 GOLIM4O00461 696 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 CIAO1O76071 339 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 MAP3K12Q12852 859 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 TRIM14Q14142 442 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 POLA2Q14181 598 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 TUBB8Q3ZCM7 444 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 PPFIBP1Q86W92 1011 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 PLBD2Q8NHP8 589 aa8.48□□□□□ -1.05
VTA1-202ENST00000367630 METTL22Q9BUU2 404 aaPredicted RBP8.48□□□□□ -1.05
VTA1-202ENST00000367630 SFPQP23246 707 aaKnown RBP eCLIP8.48□□□□□ -1.05
VTA1-202ENST00000367630 FCHSD1Q86WN1 690 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 IFIT1P09914 478 aaKnown RBP8.47□□□□□ -1.05
VTA1-202ENST00000367630 TMEM87BQ96K49 555 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 LMBRD1Q9NUN5 540 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 KDM4AO75164 1064 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 ATP5JP18859 108 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 RPS6KB1P23443 525 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 C8orf76Q96K31 380 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 ME1P48163 572 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 ZGPATQ8N5A5 531 aaKnown RBP8.47□□□□□ -1.05
VTA1-202ENST00000367630 PHACTR3Q96KR7 559 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 NEUROD6Q96NK8 337 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 C19orf44Q9H6X5 657 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 ANKRD18BA2A2Z9 1011 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 ERVV-2B6SEH9 535 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 RCAN1P53805 252 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 PTPN14Q15678 1187 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 SPTY2D1Q68D10 685 aaPredicted RBP8.47□□□□□ -1.05
VTA1-202ENST00000367630 CCDC191Q8NCU4 936 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 PIBF1Q8WXW3 757 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 CLSTN2Q9H4D0 955 aa8.47□□□□□ -1.05
VTA1-202ENST00000367630 GNAQP50148 359 aa8.46□□□□□ -1.05
VTA1-202ENST00000367630 UBE2Q2Q8WVN8 375 aa8.46□□□□□ -1.05
VTA1-202ENST00000367630 DHX32Q7L7V1 743 aaKnown RBP8.46□□□□□ -1.05
VTA1-202ENST00000367630 MRPS27Q92552 414 aaKnown RBP8.46□□□□□ -1.05
VTA1-202ENST00000367630 RBM28Q9NW13 759 aaKnown RBP8.46□□□□□ -1.05
VTA1-202ENST00000367630 DCCP43146 1447 aa8.46□□□□□ -1.05
VTA1-202ENST00000367630 TULP1O00294 542 aaPredicted RBP8.46□□□□□ -1.05
VTA1-202ENST00000367630 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.05
VTA1-202ENST00000367630 RASSF8Q8NHQ8 419 aa8.46□□□□□ -1.05
VTA1-202ENST00000367630 RBM8AQ9Y5S9 174 aaKnown RBP8.46□□□□□ -1.05
VTA1-202ENST00000367630 NUTM2FA1L443 756 aa8.46□□□□□ -1.06
VTA1-202ENST00000367630 NPHP1O15259 732 aa8.46□□□□□ -1.06
VTA1-202ENST00000367630 IGHMBP2P38935 993 aaKnown RBP8.46□□□□□ -1.06
VTA1-202ENST00000367630 NUTM2GQ5VZR2 741 aa8.46□□□□□ -1.06
VTA1-202ENST00000367630 KRT28Q7Z3Y7 464 aa8.46□□□□□ -1.06
VTA1-202ENST00000367630 SMAP1Q8IYB5 467 aaPredicted RBP8.46□□□□□ -1.06
VTA1-202ENST00000367630 V9GYY5 206 aaPredicted RBP8.46□□□□□ -1.06
VTA1-202ENST00000367630 RNF113AO15541 343 aaKnown RBP8.46□□□□□ -1.06
VTA1-202ENST00000367630 CREB3L3Q68CJ9 461 aa8.46□□□□□ -1.06
VTA1-202ENST00000367630 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
VTA1-202ENST00000367630 ZSWIM6Q9HCJ5 1215 aa8.46□□□□□ -1.06
VTA1-202ENST00000367630 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.46□□□□□ -1.062e-6■□□□□ 10
VTA1-202ENST00000367630 COL15A1P39059 1388 aa8.46□□□□□ -1.06
VTA1-202ENST00000367630 ZNF274Q96GC6 653 aaPredicted RBP8.46□□□□□ -1.06
VTA1-202ENST00000367630 YEATS4O95619 227 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 ADCY5O95622 1261 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 CRB1P82279 1406 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 IFIT5Q13325 482 aaKnown RBP8.45□□□□□ -1.06
VTA1-202ENST00000367630 METP08581 1390 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 EIF4A1P60842 406 aaKnown RBP8.45□□□□□ -1.06
VTA1-202ENST00000367630 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 NAA15Q9BXJ9 866 aaKnown RBP8.45□□□□□ -1.06
VTA1-202ENST00000367630 SSRP1Q08945 709 aaKnown RBP8.45□□□□□ -1.06
VTA1-202ENST00000367630 USP48Q86UV5 1035 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 NOC3LQ8WTT2 800 aaKnown RBP8.45□□□□□ -1.06
VTA1-202ENST00000367630 CNNM1Q9NRU3 951 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 CLIP2Q9UDT6 1046 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 NPHP4O75161 1426 aaPredicted RBP8.45□□□□□ -1.06
VTA1-202ENST00000367630 PI4KAP2A4QPH2 592 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 ZNF213O14771 459 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 GSTO1P78417 241 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 HSP90AB2PQ58FF8 381 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 PI4KAP1Q8N8J0 262 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms