RNA–Protein interactions for RNA: ENST00000367311.4

PHLDA3-202, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHLDA3, Length 2,640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-202ENST00000367311 ERCC4Q92889 916 aaPredicted RBP23.7■■□□□ 1.38
PHLDA3-202ENST00000367311 DIP2BQ9P265 1576 aa23.69■■□□□ 1.38
PHLDA3-202ENST00000367311 KCNB2Q92953 911 aa23.69■■□□□ 1.38
PHLDA3-202ENST00000367311 TNNT1P13805 278 aa23.69■■□□□ 1.38
PHLDA3-202ENST00000367311 ZNF75DP51815 510 aa23.68■■□□□ 1.38
PHLDA3-202ENST00000367311 ZSCAN25Q6NSZ9 544 aa23.68■■□□□ 1.38
PHLDA3-202ENST00000367311 CACTINQ8WUQ7 758 aaKnown RBP23.68■■□□□ 1.38
PHLDA3-202ENST00000367311 VGLL3A8MV65 326 aa23.68■■□□□ 1.38
PHLDA3-202ENST00000367311 SLFNL1Q499Z3 407 aa23.68■■□□□ 1.38
PHLDA3-202ENST00000367311 ZNF530Q6P9A1 599 aaPredicted RBP23.68■■□□□ 1.38
PHLDA3-202ENST00000367311 GPATCH3Q96I76 525 aa23.68■■□□□ 1.38
PHLDA3-202ENST00000367311 RPS6KB1P23443 525 aa23.67■■□□□ 1.38
PHLDA3-202ENST00000367311 SEC62Q99442 399 aaKnown RBP23.67■■□□□ 1.38
PHLDA3-202ENST00000367311 USP27XA6NNY8 438 aa23.67■■□□□ 1.38
PHLDA3-202ENST00000367311 ZNF165P49910 485 aa23.67■■□□□ 1.38
PHLDA3-202ENST00000367311 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.67■■□□□ 1.38
PHLDA3-202ENST00000367311 MORC2Q9Y6X9 1032 aaPredicted RBP23.67■■□□□ 1.38
PHLDA3-202ENST00000367311 V9GYY5 206 aaPredicted RBP23.67■■□□□ 1.38
PHLDA3-202ENST00000367311 PIP4K2AP48426 406 aaPredicted RBP23.66■■□□□ 1.38
PHLDA3-202ENST00000367311 CEMIPQ8WUJ3 1361 aa23.66■■□□□ 1.38
PHLDA3-202ENST00000367311 NPHP4O75161 1426 aaPredicted RBP23.66■■□□□ 1.38
PHLDA3-202ENST00000367311 CACNA1FO60840 1977 aa23.66■■□□□ 1.38
PHLDA3-202ENST00000367311 CCDC112Q8NEF3 446 aa23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 KIF18AQ8NI77 898 aa23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 BRF1Q92994 677 aa23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 CLIP2Q9UDT6 1046 aa23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 G3BP1Q13283 466 aaKnown RBP eCLIP23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 C11orf57Q6ZUT1 292 aaPredicted RBP23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 NAP1L2Q9ULW6 460 aaPredicted RBP23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 UBR1Q8IWV7 1749 aa23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 COL15A1P39059 1388 aa23.65■■□□□ 1.38
PHLDA3-202ENST00000367311 CLSTN2Q9H4D0 955 aa23.64■■□□□ 1.38
PHLDA3-202ENST00000367311 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.38
PHLDA3-202ENST00000367311 N4BP2Q86UW6 1770 aaPredicted RBP23.64■■□□□ 1.38
PHLDA3-202ENST00000367311 TERF2Q15554 542 aa23.64■■□□□ 1.37
PHLDA3-202ENST00000367311 PLA2G4DQ86XP0 818 aa23.64■■□□□ 1.37
PHLDA3-202ENST00000367311 USP16Q9Y5T5 823 aa23.64■■□□□ 1.37
PHLDA3-202ENST00000367311 HSP90B1P14625 803 aaKnown RBP23.63■■□□□ 1.37
PHLDA3-202ENST00000367311 MTX1Q13505 466 aa23.63■■□□□ 1.37
PHLDA3-202ENST00000367311 DBF4Q9UBU7 674 aaPredicted RBP23.63■■□□□ 1.37
PHLDA3-202ENST00000367311 PLEKHG1Q9ULL1 1385 aa23.63■■□□□ 1.37
PHLDA3-202ENST00000367311 PSMA5P28066 241 aa23.63■■□□□ 1.37
PHLDA3-202ENST00000367311 TPD52L1Q16890 204 aaPredicted RBP23.63■■□□□ 1.37
PHLDA3-202ENST00000367311 EPHA10Q5JZY3 1008 aa23.63■■□□□ 1.37
PHLDA3-202ENST00000367311 PAXBP1Q9Y5B6 917 aa23.63■■□□□ 1.37
PHLDA3-202ENST00000367311 KCNA6P17658 529 aa23.62■■□□□ 1.37
PHLDA3-202ENST00000367311 CDK11BP21127 795 aaKnown RBP23.62■■□□□ 1.37
PHLDA3-202ENST00000367311 KSR2Q6VAB6 950 aa23.62■■□□□ 1.37
PHLDA3-202ENST00000367311 BABAM1Q9NWV8 329 aa23.62■■□□□ 1.37
PHLDA3-202ENST00000367311 DIP2AQ14689 1571 aa23.62■■□□□ 1.37
PHLDA3-202ENST00000367311 ELP1O95163 1332 aa23.62■■□□□ 1.37
PHLDA3-202ENST00000367311 MYL6BP14649 208 aa23.62■■□□□ 1.37
PHLDA3-202ENST00000367311 KLHL34Q8N239 644 aa23.62■■□□□ 1.37
PHLDA3-202ENST00000367311 GRM8O00222 908 aa23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 IRX5P78411 483 aaPredicted RBP23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 SCAND2PQ9GZW5 306 aaPredicted RBP23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 A0A0G2JLW4 131 aa23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 GUCY1B3Q02153 619 aa23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 Q6ZUG5 572 aa23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 SYTL4Q96C24 671 aaPredicted RBP23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 TRMT1Q9NXH9 659 aaKnown RBP23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
PHLDA3-202ENST00000367311 NPHP3Q7Z494 1330 aa23.6■■□□□ 1.37
PHLDA3-202ENST00000367311 GIGYF1O75420 1035 aaPredicted RBP23.6■■□□□ 1.37
PHLDA3-202ENST00000367311 PDCP20941 246 aa23.6■■□□□ 1.37
PHLDA3-202ENST00000367311 KRT222Q8N1A0 295 aa23.6■■□□□ 1.37
PHLDA3-202ENST00000367311 SLC39A6Q13433 755 aa23.6■■□□□ 1.37
PHLDA3-202ENST00000367311 DNAJC2Q99543 621 aaKnown RBP23.6■■□□□ 1.37
PHLDA3-202ENST00000367311 CCDC66A2RUB6 948 aa23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 H3BQV1 296 aa23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 TAF5LO75529 589 aa23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 RESTQ13127 1097 aa23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 IFFO2Q5TF58 517 aa23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 ERC1Q8IUD2 1116 aa23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 TDRD7Q8NHU6 1098 aaKnown RBP23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 GOLPH3LQ9H4A5 285 aa23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 FILIP1Q7Z7B0 1213 aa23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 DDX19AQ9NUU7 478 aaKnown RBP23.59■■□□□ 1.37
PHLDA3-202ENST00000367311 IGKV5-2P06315 115 aa23.58■■□□□ 1.36
PHLDA3-202ENST00000367311 RNF20Q5VTR2 975 aa23.58■■□□□ 1.36
PHLDA3-202ENST00000367311 NPHP1O15259 732 aa23.57■■□□□ 1.36
PHLDA3-202ENST00000367311 KMT5BQ4FZB7 885 aa23.57■■□□□ 1.36
PHLDA3-202ENST00000367311 PXDNQ92626 1479 aa23.57■■□□□ 1.36
PHLDA3-202ENST00000367311 MED23Q9ULK4 1368 aa23.57■■□□□ 1.36
PHLDA3-202ENST00000367311 RNMTO43148 476 aaKnown RBP23.57■■□□□ 1.36
PHLDA3-202ENST00000367311 CCT2P78371 535 aaKnown RBP23.57■■□□□ 1.36
PHLDA3-202ENST00000367311 GTF3C6Q969F1 213 aa23.57■■□□□ 1.36
PHLDA3-202ENST00000367311 ERICH4A6NGS2 130 aa23.56■■□□□ 1.36
PHLDA3-202ENST00000367311 SCRN1Q12765 414 aa23.56■■□□□ 1.36
PHLDA3-202ENST00000367311 CEP135Q66GS9 1140 aa23.56■■□□□ 1.36
PHLDA3-202ENST00000367311 CHST3Q7LGC8 479 aa23.56■■□□□ 1.36
PHLDA3-202ENST00000367311 IP6K1Q92551 441 aa23.56■■□□□ 1.36
PHLDA3-202ENST00000367311 RBM43Q6ZSC3 357 aaKnown RBP23.56■■□□□ 1.36
PHLDA3-202ENST00000367311 DDX46Q7L014 1031 aaKnown RBP23.56■■□□□ 1.36
PHLDA3-202ENST00000367311 NCOA5Q9HCD5 579 aaKnown RBP23.56■■□□□ 1.36
PHLDA3-202ENST00000367311 ALDH1L1O75891 902 aa23.55■■□□□ 1.36
PHLDA3-202ENST00000367311 ZNF397Q8NF99 534 aaPredicted RBP23.55■■□□□ 1.36
PHLDA3-202ENST00000367311 NEK1Q96PY6 1258 aa23.55■■□□□ 1.36
PHLDA3-202ENST00000367311 MARF1Q9Y4F3 1742 aaKnown RBP23.55■■□□□ 1.36
PHLDA3-202ENST00000367311 DBNLQ9UJU6 430 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms