RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PATL2C9JE40 543 aaKnown RBP13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 CKAP4Q07065 602 aaKnown RBP13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 TMEM67Q5HYA8 995 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 FAM177A1Q8N128 213 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 A0A1W2PP64 1363 aa13.84□□□□□ -0.19
CDC42BPA-203ENST00000366766 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.19
CDC42BPA-203ENST00000366766 TARBP1Q13395 1621 aaKnown RBP13.83□□□□□ -0.19
CDC42BPA-203ENST00000366766 FAM177BA6PVY3 158 aa13.83□□□□□ -0.19
CDC42BPA-203ENST00000366766 ZNF444Q8N0Y2 327 aaPredicted RBP13.83□□□□□ -0.19
CDC42BPA-203ENST00000366766 PLVAPQ9BX97 442 aa13.83□□□□□ -0.19
CDC42BPA-203ENST00000366766 POLR3DP05423 398 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 SSBP05455 408 aaKnown RBP eCLIP13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 NEFHP12036 1026 aa13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 ORC3Q9UBD5 711 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 LUZP1Q86V48 1076 aa13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 MSH6P52701 1360 aa13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 PER1O15534 1290 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 NEO1Q92859 1461 aa13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 SYKP43405 635 aa13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 PPP4R3AQ6IN85 833 aa13.83□□□□□ -0.2
CDC42BPA-203ENST00000366766 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 ENOX2Q16206 610 aaKnown RBP13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 ESR2Q92731 530 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 GCOM1H8Y6P7 765 aaPredicted RBP13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 MYZAPP0CAP1 466 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 TET3O43151 1660 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 UBA7P41226 1012 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 MRPS27Q92552 414 aaKnown RBP13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 CALML3P27482 149 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 ANKIB1Q9P2G1 1089 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 CCDC152Q4G0S7 254 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 GOLGA6L10A0A0M3HER8 536 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 CALM1P0DP23 149 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 CALM2P0DP24 149 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 CALM3P0DP25 149 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 RTL9Q8NET4 1388 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 CRNKL1Q9BZJ0 848 aaKnown RBP13.82□□□□□ -0.2
CDC42BPA-203ENST00000366766 ERMNQ8TAM6 284 aa13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 BBXQ8WY36 941 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 USP37Q86T82 979 aa13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 C16orf45Q96MC5 204 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 CKAP2LQ8IYA6 745 aa13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 CCDC8Q9H0W5 538 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 PTCD1O75127 700 aaKnown RBP13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 F13A1P00488 732 aa13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 ZKSCAN5Q9Y2L8 839 aa13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 CERS3Q8IU89 383 aa13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
CDC42BPA-203ENST00000366766 LDHAL6AQ6ZMR3 332 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 RANBP6O60518 1105 aaKnown RBP13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 PRPHP41219 470 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 LLPHQ9BRT6 129 aaKnown RBP13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 RTL1A6NKG5 1358 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 ZBTB43O43298 467 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 CENPHQ9H3R5 247 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 POLKQ9UBT6 870 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 MYO1BO43795 1136 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 CEP135Q66GS9 1140 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 MEIS3Q99687 375 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 VAMP4O75379 141 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 RBM5P52756 815 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 NLRP5P59047 1200 aa13.8□□□□□ -0.2
CDC42BPA-203ENST00000366766 POLR3GO15318 223 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 URI1O94763 535 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 CEP85Q6P2H3 762 aa13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 ADCY10Q96PN6 1610 aa13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 PPP1R2P41236 205 aa13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 WTAPQ15007 396 aa13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 TMC6Q7Z403 805 aa13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 CRACR2BQ8N4Y2 399 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 RPGRQ92834 1020 aaKnown RBP13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 FOXO3O43524 673 aa13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 CHPF2Q9P2E5 772 aa13.79□□□□□ -0.2
CDC42BPA-203ENST00000366766 EXOC5O00471 708 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 HLA-DOAP06340 250 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 PRKCSHP14314 528 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 PLCG2P16885 1265 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 MYOM2P54296 1465 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 PIP4K2BP78356 416 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 KRT222Q8N1A0 295 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 ARFGAP3Q9NP61 516 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 SF3B2Q13435 895 aaKnown RBP13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 PLEKHM2Q8IWE5 1019 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 KAT14Q9H8E8 782 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 RBM8AQ9Y5S9 174 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms