RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 TSR2Q969E8 191 aaKnown RBP6.08□□□□□ -1.44
PDE4D-205ENST00000360047 CAMKK2Q96RR4 588 aa6.08□□□□□ -1.44
PDE4D-205ENST00000360047 MBIPQ9NS73 344 aa6.08□□□□□ -1.44
PDE4D-205ENST00000360047 ANKRD62A6NC57 917 aa6.07□□□□□ -1.44
PDE4D-205ENST00000360047 ESPNB1AK53 854 aa6.07□□□□□ -1.44
PDE4D-205ENST00000360047 EIF4A1P60842 406 aaKnown RBP6.07□□□□□ -1.44
PDE4D-205ENST00000360047 GORABQ5T7V8 394 aa6.07□□□□□ -1.44
PDE4D-205ENST00000360047 ANKRD13AQ8IZ07 590 aa6.07□□□□□ -1.44
PDE4D-205ENST00000360047 STK32BQ9NY57 414 aa6.07□□□□□ -1.44
PDE4D-205ENST00000360047 ISY1Q9ULR0 285 aaKnown RBP6.07□□□□□ -1.44
PDE4D-205ENST00000360047 CREBRFQ8IUR6 639 aa6.07□□□□□ -1.44
PDE4D-205ENST00000360047 DNAJC10Q8IXB1 793 aa6.07□□□□□ -1.44
PDE4D-205ENST00000360047 AK7Q96M32 723 aa6.07□□□□□ -1.44
PDE4D-205ENST00000360047 ZNF330Q9Y3S2 320 aaPredicted RBP6.07□□□□□ -1.44
PDE4D-205ENST00000360047 ZNF853P0CG23 659 aa6.06□□□□□ -1.44
PDE4D-205ENST00000360047 XRCC6P12956 609 aaKnown RBP eCLIP6.06□□□□□ -1.44
PDE4D-205ENST00000360047 DUSP27Q5VZP5 1158 aa6.06□□□□□ -1.44
PDE4D-205ENST00000360047 CHMP4CQ96CF2 233 aa6.06□□□□□ -1.44
PDE4D-205ENST00000360047 CDCA7LQ96GN5 454 aa6.06□□□□□ -1.44
PDE4D-205ENST00000360047 TMEM121BQ9BXQ6 578 aaPredicted RBP6.06□□□□□ -1.44
PDE4D-205ENST00000360047 TFCP2L1Q9NZI6 479 aa6.06□□□□□ -1.44
PDE4D-205ENST00000360047 KLHL42Q9P2K6 505 aa6.06□□□□□ -1.44
PDE4D-205ENST00000360047 SHANK3Q9BYB0 1731 aa6.06□□□□□ -1.44
PDE4D-205ENST00000360047 DOT1LQ8TEK3 1739 aa6.06□□□□□ -1.44
PDE4D-205ENST00000360047 GOLGA6L3A6NEY3 463 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 EXOSC9Q06265 439 aaKnown RBP6.05□□□□□ -1.44
PDE4D-205ENST00000360047 SLFN5Q08AF3 891 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 SPOCK2Q92563 424 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 GTPBP4Q9BZE4 634 aaKnown RBP6.05□□□□□ -1.44
PDE4D-205ENST00000360047 USP16Q9Y5T5 823 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 HEG1Q9ULI3 1381 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 GOLGA6CA6NDK9 693 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 GOLGA6BA6NDN3 693 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 GIGYF1O75420 1035 aaPredicted RBP6.05□□□□□ -1.44
PDE4D-205ENST00000360047 CT47B1P0C2W7 299 aaPredicted RBP6.05□□□□□ -1.44
PDE4D-205ENST00000360047 GOLGA6DP0CG33 693 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 ITPK1Q13572 414 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 PPP4R3BQ5MIZ7 849 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 IGSF5Q9NSI5 407 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 LRRC4BQ9NT99 713 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 WDR70Q9NW82 654 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 GOLGA6AQ9NYA3 693 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 PPP1R1BQ9UD71 204 aaPredicted RBP6.05□□□□□ -1.44
PDE4D-205ENST00000360047 PCDHB8Q9UN66 801 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 GNPATO15228 680 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 KRT24Q2M2I5 525 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 TWISTNBQ3B726 338 aaPredicted RBP6.05□□□□□ -1.44
PDE4D-205ENST00000360047 LCE2DQ5TA82 110 aaPredicted RBP6.05□□□□□ -1.44
PDE4D-205ENST00000360047 HDGFL1Q5TGJ6 251 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 EP400NLQ6ZTU2 488 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 STK31Q9BXU1 1019 aa6.05□□□□□ -1.44
PDE4D-205ENST00000360047 RTCBQ9Y3I0 505 aaKnown RBP6.05□□□□□ -1.44
PDE4D-205ENST00000360047 SCN11AQ9UI33 1791 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 PRAMEF22A3QJZ6 481 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 ZNF500O60304 480 aaPredicted RBP6.04□□□□□ -1.44
PDE4D-205ENST00000360047 A1BGP04217 495 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 SCP2P22307 547 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 CRKLP46109 303 aaKnown RBP6.04□□□□□ -1.44
PDE4D-205ENST00000360047 MRE11P49959 708 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 GIMAP6Q6P9H5 292 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 C8orf58Q8NAV2 365 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 LINC00116Q8NCU8 138 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 SLC4A9Q96Q91 983 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 CCDC87Q9NVE4 849 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 ZNF521Q96K83 1311 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 NHSQ6T4R5 1651 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 DLG5Q8TDM6 1919 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 LETM1O95202 739 aaPredicted RBP6.04□□□□□ -1.44
PDE4D-205ENST00000360047 CYP19A1P11511 503 aaPredicted RBP6.04□□□□□ -1.44
PDE4D-205ENST00000360047 TRAPPC3LQ5T215 181 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 CCDC30Q5VVM6 783 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 ZC3H15Q8WU90 426 aaKnown RBP6.04□□□□□ -1.44
PDE4D-205ENST00000360047 ANP32BQ92688 251 aaKnown RBP6.04□□□□□ -1.44
PDE4D-205ENST00000360047 MRC1P22897 1456 aa6.04□□□□□ -1.44
PDE4D-205ENST00000360047 CARNS1A5YM72 827 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 HOXB7P09629 217 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 MYL6BP14649 208 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 ITGB4P16144 1822 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 SLC15A2Q16348 729 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 RC3H1Q5TC82 1133 aaKnown RBP6.03□□□□□ -1.44
PDE4D-205ENST00000360047 CASC1Q6TDU7 716 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 OTUD6BQ8N6M0 293 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 ARHGEF1Q92888 912 aaKnown RBP6.03□□□□□ -1.44
PDE4D-205ENST00000360047 BTAF1O14981 1849 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 SBF2Q86WG5 1849 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 TOGARAM1Q9Y4F4 1720 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 EPB41L2O43491 1005 aaKnown RBP6.03□□□□□ -1.44
PDE4D-205ENST00000360047 OFD1O75665 1012 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 ECM2O94769 699 aaPredicted RBP6.03□□□□□ -1.44
PDE4D-205ENST00000360047 RFC4P35249 363 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 PIP4K2AP48426 406 aaPredicted RBP6.03□□□□□ -1.44
PDE4D-205ENST00000360047 KRBA2Q6ZNG9 492 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 KIAA1211Q6ZU35 1233 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 TSPYL6Q8N831 410 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 FLAD1Q8NFF5 587 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 ZC3H4Q9UPT8 1303 aaKnown RBP6.03□□□□□ -1.44
PDE4D-205ENST00000360047 A0A087WZG4 1122 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 ZPR1O75312 459 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 RPS6KA4O75676 772 aa6.03□□□□□ -1.44
PDE4D-205ENST00000360047 PDAP1Q13442 181 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms